prot_L-elsbetiae_contig10161.213.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10161.213.1
Unique Nameprot_L-elsbetiae_contig10161.213.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length261
Homology
BLAST of mRNA_L-elsbetiae_contig10161.213.1 vs. uniprot
Match: D7FNG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG6_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 4.250e-127
Identity = 205/269 (76.21%), Postives = 220/269 (81.78%), Query Frame = 0
Query:    1 MVIPLLSTSVLLSCSRNLPAGSMMGTLMASDPRECNALAEAYTCCLSADGLSLGGKNLPTLERMLCPPNGEADADLMTLDAALIGAGTSERANWGGDEGVLRTLRLCILDLLLENVEQRGPNLAHLLLGLLGPSTSAA--------AAAAPRASVCLEAVVGLLNSPMMMEQEPRLAEKCSHLLYKLCSCKDTRVSVLNRLRNSSGGRSKEAFFPQAIRLALGGRRLEPASSSAAALAGRGAKPDVSFERHCLAWLLKAAAIDLRTSCE 261
            MVIPLLSTSVLLSC RNLPAG+MM TLMASDPRECNALAEAYTCCL+ADGL LGG NLP+LE MLCPPNGEAD D MTLDAALIGAGT  R NWGGDEG LRT+RLCILDLLLENVEQRGPNLAHLLLGL+GPS + A        AAA PRASVCLEAVV LL SP+++EQEPRLAEKCSHLLYKLCS KDTRVS LNRLR+ SGG S  AFFPQA+R+AL       +  S   +    AK + SF RHCLAWLLKAAAIDLRTSCE
Sbjct:  360 MVIPLLSTSVLLSCGRNLPAGNMMATLMASDPRECNALAEAYTCCLAADGLGLGGNNLPSLEGMLCPPNGEADGDFMTLDAALIGAGTGGR-NWGGDEGALRTVRLCILDLLLENVEQRGPNLAHLLLGLVGPSATTAVAGRGRGAAAALPRASVCLEAVVSLLQSPVVVEQEPRLAEKCSHLLYKLCSSKDTRVSALNRLRHPSGGSSNAAFFPQALRVALA-----DSGRSMMMMPPPEAKAEASFGRHCLAWLLKAAAIDLRTSCE 622          
BLAST of mRNA_L-elsbetiae_contig10161.213.1 vs. uniprot
Match: A0A6H5L6F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6F6_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 2.890e-46
Identity = 85/101 (84.16%), Postives = 89/101 (88.12%), Query Frame = 0
Query:    1 MVIPLLSTSVLLSCSRNLPAGSMMGTLMASDPRECNALAEAYTCCLSADGLSLGGKNLPTLERMLCPPNGEADADLMTLDAALIGAGTSERANWGGDEGVL 101
            MVIPLLSTSVLLSC RNLPAG+MM TLMASDPRECNALAEAYT CL+ADGLSLGG NLP+LE MLCPPN EAD D MTLD ALIGAGT ER NWGGDEG +
Sbjct:  356 MVIPLLSTSVLLSCGRNLPAGNMMATLMASDPRECNALAEAYTYCLAADGLSLGGNNLPSLEEMLCPPNREADGDFMTLDTALIGAGTGER-NWGGDEGAV 455          
BLAST of mRNA_L-elsbetiae_contig10161.213.1 vs. uniprot
Match: A0A484ED66_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ED66_BRELC)

HSP 1 Score: 59.3 bits (142), Expect = 2.550e-6
Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = 0
Query:  103 TLRLCILDLLLENVEQRGPNLAHLLLGLLGPSTSAAAAAAPRA--SVCLEAVVGLLNSPMMMEQEPRLAEKCSHLLYKL 179
            ++R+ ILDLLLEN+++  PN+AHLLLG    S     AA P +     L AV+ L+++     ++P LAE+C H+LY L
Sbjct: 1086 SIRVAILDLLLENLDKPAPNVAHLLLGYASHSGDLEMAAVPASYMKTGLAAVITLVSNADFGLEKPELAERCYHVLYSL 1164          
BLAST of mRNA_L-elsbetiae_contig10161.213.1 vs. uniprot
Match: UPI00097D906B (nuclear pore complex protein Nup205 n=3 Tax=Percomorphaceae TaxID=1489872 RepID=UPI00097D906B)

HSP 1 Score: 54.7 bits (130), Expect = 8.530e-5
Identity = 51/166 (30.72%), Postives = 81/166 (48.80%), Query Frame = 0
Query:  108 ILDLLLENVEQRGPNLAHLLLG--LLGPSTSA-----AAAAAPRASVCLEAVVGLL-------NSPMMMEQEPRLAEKCSHLLYKLCSCKDTRVSVLNRLRNSSGGRSKEAFFPQAIRLALGGRRLEPASSSAAALAGRGAKPDVSFERHCLAWLLKAAAIDLRTS 259
            IL+LL+ ++E + PNLA  LLG  +  P +S           PR+  CL A++ LL       + P++ +Q P LAE C  ++Y+LC+C DT    +  LR S     ++  F     +      + P S+  AAL+              ++WL+K AAI+LR +
Sbjct:  987 ILNLLINSLELKTPNLALYLLGYEVKKPVSSTNLQDPGVLGCPRS--CLHAILSLLQRGTEKRSGPVITQQAPHLAELCYQVIYQLCACPDTSGPTMRYLRTS-----QDFLFSHLQHMPF----ILP-SNQIAALSQ-------------MSWLMKTAAIELRVT 1127          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10161.213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FNG6_ECTSI4.250e-12776.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6F6_9PHAE2.890e-4684.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A484ED66_BRELC2.550e-643.04Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
UPI00097D906B8.530e-530.72nuclear pore complex protein Nup205 n=3 Tax=Percom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021827Nucleoporin Nup186/Nup192/Nup205PFAMPF11894Nup192coord: 102..256
e-value: 2.4E-12
score: 44.9
IPR021827Nucleoporin Nup186/Nup192/Nup205PANTHERPTHR31344:SF0NUCLEAR PORE COMPLEX PROTEIN NUP205coord: 104..258
NoneNo IPR availablePANTHERPTHR31344FAMILY NOT NAMEDcoord: 104..258
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..261
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10161contigL-elsbetiae_contig10161:1353..6953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10161.213.1mRNA_L-elsbetiae_contig10161.213.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10161 1353..6977 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10161.213.1 ID=prot_L-elsbetiae_contig10161.213.1|Name=mRNA_L-elsbetiae_contig10161.213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=261bp
MVIPLLSTSVLLSCSRNLPAGSMMGTLMASDPRECNALAEAYTCCLSADG
LSLGGKNLPTLERMLCPPNGEADADLMTLDAALIGAGTSERANWGGDEGV
LRTLRLCILDLLLENVEQRGPNLAHLLLGLLGPSTSAAAAAAPRASVCLE
AVVGLLNSPMMMEQEPRLAEKCSHLLYKLCSCKDTRVSVLNRLRNSSGGR
SKEAFFPQAIRLALGGRRLEPASSSAAALAGRGAKPDVSFERHCLAWLLK
AAAIDLRTSCE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021827Nup186/Nup192/Nup205