prot_L-elsbetiae_contig1261.2105.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1261.2105.1
Unique Nameprot_L-elsbetiae_contig1261.2105.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length259
Homology
BLAST of mRNA_L-elsbetiae_contig1261.2105.1 vs. uniprot
Match: A0A6H5JYV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYV6_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 2.020e-109
Identity = 173/282 (61.35%), Postives = 202/282 (71.63%), Query Frame = 0
Query:    1 MAKLESLGADPLCNIVAFALGADIVALLATGRHVRATLAGSVARKHFQALSIARWGEGCRCHYAIAKATKTL------EEDGEIIRSGSTNDVQNSAGTIEKTFKNVSSSXXXXXXXXXXGKEKCTEEGD------------------DWLAFFLRRVGHRAMRPSPLDLLQEHYSEDAYRLLSCCILCSRTSGGDTVKNAVAAFFKACPTPTSVLSADQEELRETLLPLGLNREVIMKRFAEGFLASPWHDPSELHGCGRFASDSWQIFCLGSYRPGDQVV 258
            M +L+ LGAD LCNIV FA GA+IVALL   R +RATLAG +ARKHFQA+S+ARWGEGCRC YA+A A   L      E D +    G+    ++S+   +    ++ SS           K   T                      DWLAF+LRRVGHRA RPSPL+LLQEHY+EDAYRLLSCCILCSRTSGGDTVK+AV AFF+ACPTPTSVL+AD  ELR+TLLPLGLNRE+I+KRFAEGFLAS WHDPSELHGCGRFASDSWQIFCLG++RPG+QV+
Sbjct:    1 MNQLQDLGADALCNIVVFATGAEIVALLQAARCIRATLAGPLARKHFQAMSVARWGEGCRCQYAVADAGTKLPRAAVDESDYDHHHGGTDVGARSSSNATDNG--DIDSSDNGDGDDSIGNKPPATGXXXXXXXXXXXXXXXXXXXXADWLAFYLRRVGHRAARPSPLNLLQEHYTEDAYRLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGELRKTLLPLGLNRELIIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHRPGNQVI 280          
BLAST of mRNA_L-elsbetiae_contig1261.2105.1 vs. uniprot
Match: D8LDP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP6_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 2.480e-107
Identity = 169/274 (61.68%), Postives = 196/274 (71.53%), Query Frame = 0
Query:    1 MAKLESLGADPLCNIVAFALGADIVALLATGRHVRATLAGSVARKHFQALSIARWGEGCRCHYAIAKATKTLEE------DGEIIRSGSTNDVQNSAGTIEKTFKNVSSSXXXXXXXXXXGKEKCTEEGD---------DWLAFFLRRVGHRAMRPSPLDLLQEHYSEDAYRLLSCCILCSRTSGGDTVKNAVAAFFKACPTPTSVLSADQEELRETLLPLGLNREVIMKRFAEGFLASPWHDPSELHGCGRFASDSWQIFCLGSYRPGDQVVA 259
            M +L+ LGAD LCN+V FA GA+IVALL T R +RATL G +ARKHFQA+S+ARWGEGCRC YA+A A   L        D +    G+    +NS         +V S         XX                   DWLAF+LRRVGHRA RPSPL+LLQEHY++DAY LLSCCILCSRTSGGDTVK+AV AFF+ACPTPTSVL+AD  +LR+TLLPLGLNRE+I+KRFAEGFLAS WHDPSELHGCGRFASDSWQIFCLG++RPG+Q  A
Sbjct:    1 MNQLQDLGADALCNMVVFATGAEIVALLQTARCIRATLVGPLARKHFQAMSVARWGEGCRCQYAVAAAGTKLPRAAADGSDFDHHHGGTGAGARNSYAADNGDGDDVRSGDKPHTTGNXXXXXXXXXXXXXXXXXXXXADWLAFYLRRVGHRAARPSPLNLLQEHYAKDAYHLLSCCILCSRTSGGDTVKDAVKAFFEACPTPTSVLAADLGDLRKTLLPLGLNRELIIKRFAEGFLASAWHDPSELHGCGRFASDSWQIFCLGNHRPGNQSAA 274          
BLAST of mRNA_L-elsbetiae_contig1261.2105.1 vs. uniprot
Match: A0A835ZF17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF17_9STRA)

HSP 1 Score: 154 bits (389), Expect = 2.840e-42
Identity = 75/126 (59.52%), Postives = 90/126 (71.43%), Query Frame = 0
Query:  126 WLAFFLRRVGHRAMRP--SPLDLLQEHYSEDAYRLLSCCILCSRTSGGDTVKNAVAAFFKACPTPTSVLSADQEELRETLLPLGLNREVIMKRFAEGFLASPWHDPSELHGCGRFASDSWQIFCLG 249
            W A++LRRV H A RP  SPLDL+QE ++ +A+ LL+   LCSRTSGG  V+  + AF +  PTP SVLSAD   LR  LLPLGLNRE  + RFA  F   PW DPSELHGCG+ A+DSW+IFCLG
Sbjct:   33 WSAYYLRRVSHVAARPPLSPLDLVQERHARNAFTLLASVQLCSRTSGGALVRGVIDAFMELYPTPQSVLSADAAALRALLLPLGLNRERTLARFALEFATKPWRDPSELHGCGKLAADSWRIFCLG 158          
BLAST of mRNA_L-elsbetiae_contig1261.2105.1 vs. uniprot
Match: K0R6H7_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R6H7_THAOC)

HSP 1 Score: 134 bits (336), Expect = 3.230e-34
Identity = 64/132 (48.48%), Postives = 86/132 (65.15%), Query Frame = 0
Query:  125 DWLAFFLRRVGHRAMRP--SPLDLLQEHYSEDAYRLLSCCILCSRTSGGDTVKNAVAAFFKACPTPTSVLSADQEELRETLLPLGLNREVIMKRFAEGFLASPWHDP--SELHGCGRFASDSWQIFCLGSYR 252
            DW  +F  R     +    SPLDL+QE Y++D +R+LS CIL SRTSGG  ++  ++ FF+A P+PT+V++ D  ++   L PLGLNRE  MKRFA  FL+  W D   S LHGCG FA +SW +FC G Y+
Sbjct:   95 DWYKYFCNRSASARLPSECSPLDLIQERYADDPFRMLSSCILASRTSGGFIIRRVISDFFEAYPSPTAVINGDTNDMATMLHPLGLNRERTMKRFAIDFLSPEWTDGRVSRLHGCGNFAQNSWDVFCHGRYQ 226          
BLAST of mRNA_L-elsbetiae_contig1261.2105.1 vs. uniprot
Match: A0A7S2PHI3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PHI3_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.360e-34
Identity = 65/129 (50.39%), Postives = 83/129 (64.34%), Query Frame = 0
Query:  126 WLAFFLRRVGHRAM--RPSPLDLLQEHYSEDAYRLLSCCILCSRTSGGDTVKNAVAAFFKACPTPTSVLSADQEELRETLLPLGLNREVIMKRFAEGFLASPWHDPSELHGCGRFASDSWQIFCLGSYR 252
            W  ++  R     +  + S LDL+QE Y  D Y+LLS CILCSRTSG   V++ V AFF+   TP+ +LS D   + + L PLGLNRE  MK+FA+GFL  PW   SELHGCG FAS S+ IFC G ++
Sbjct:   31 WYEYYRHRCSWMPLPRQKSKLDLIQEDYGHDPYKLLSACILCSRTSGSQNVRDVVKAFFEKYKTPSDILSGDIATIEKELKPLGLNREKTMKKFAQGFLR-PWTQVSELHGCGAFASSSFDIFCRGDFK 158          
BLAST of mRNA_L-elsbetiae_contig1261.2105.1 vs. uniprot
Match: A0A7S4MVC1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MVC1_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.350e-32
Identity = 67/140 (47.86%), Postives = 88/140 (62.86%), Query Frame = 0
Query:  116 KEKCTEEGDDWLAFFLRRVGHRAMRP---SPLDLLQEHYSEDAYRLLSCCILCSRTSGGDTVKNAVAAFFKACPTPTSVLSADQEELRETLLPLGLNREVIMKRFAEGFLASPWHDPSELHGCGRFASDSWQIFCLGSYR 252
            +E     G +W  ++  R   R   P   SPLDL+QE +  DA+ LLS CILCSRTSG D +++++A F     TPT V+ AD+  LRE LLPLGLNRE  ++RFA  FL+  W   S+LHGCG FA  S ++FC G +R
Sbjct:   91 EELLPARGCEWFRYYRLRASLRWDMPPVSSPLDLIQERHRSDAWSLLSTCILCSRTSGSDKIRSSIAEFHATYRTPTDVVRADESILREMLLPLGLNRERTLRRFAIEFLSLEWRHVSDLHGCGAFADASHRVFCRGKWR 230          
BLAST of mRNA_L-elsbetiae_contig1261.2105.1 vs. uniprot
Match: A0A2P6VFC8_9CHLO (DNA glycosylase isoform A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFC8_9CHLO)

HSP 1 Score: 120 bits (302), Expect = 4.460e-29
Identity = 55/126 (43.65%), Postives = 81/126 (64.29%), Query Frame = 0
Query:  126 WLAFFLRRVGHRAMRPSPLDLLQEHYSEDAYRLLSCCILCSRTSGGDTVKNAVAAFFKACPTPTSVLSADQEELRETLLPLGL--NREVIMKRFAEGFLASPWHDPSELHGCGRFASDSWQIFCLG 249
            W A+   R+   +  PSPLDL+QEH+++  ++ +  C+LCSRT+GG  V+ A+  F    PTP+ VL+A  + L   + PLGL  +R   ++  A GFLA+ W +PS+ HGCG+F SDS+ IFC G
Sbjct:   64 WAAWTKHRLCAASHPPSPLDLIQEHFTDCPFQHMVACVLCSRTTGGPVVRQAIQLFLLLYPTPSDVLAAGDDSLLAVMHPLGLGASRLAAVRSIAHGFLATDWQEPSQFHGCGKFVSDSYHIFCRG 189          
BLAST of mRNA_L-elsbetiae_contig1261.2105.1 vs. uniprot
Match: A0A5A8DJ41_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DJ41_CAFRO)

HSP 1 Score: 115 bits (287), Expect = 3.240e-28
Identity = 60/115 (52.17%), Postives = 73/115 (63.48%), Query Frame = 0
Query:  142 SPLDLLQEHYSEDAYRLLSCCILCSRTSGGDTVKNAVAAFFKACPTPTSVLSADQEE----LRETLLPLGLNREVIMKRFAEGFLASPWHDPSELHGCGRFASDSWQIFCLGSYR 252
            SP+ + QE Y  D ++LLS C+L SRTSGGD V   + AFF+  PTPT+VL   +      + E L PLGLNRE  + R AEGFL   W  PSEL+GCG+FA DSW  FC G  R
Sbjct:    3 SPMKMFQETYGYDPWKLLSGCVLSSRTSGGDRVWGPIRAFFERFPTPTAVLDEAEANGLAGMEEMLKPLGLNRERTITRAAEGFLRV-WDRPSELYGCGKFAEDSWLAFCHGEVR 116          
BLAST of mRNA_L-elsbetiae_contig1261.2105.1 vs. uniprot
Match: A0A383WAV0_TETOB (F-box domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WAV0_TETOB)

HSP 1 Score: 119 bits (298), Expect = 9.830e-28
Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = 0
Query:  126 WLAFFLRRVGHRAMRPSPLDLLQEHYSEDAYRLLSCCILCSRTSGGDTVKNAVAAFFKACPTPTSVLSADQEELRETLLPLGLN--REVIMKRFAEGFLASPWHDPSELHGCGRFASDSWQIFCLG 249
            W  +  +R+  + +R SPL LLQE Y  D +  ++CC+LCSRTSG  T+++ +A FF+A P+P++ L    + +   L PLGL   R   ++  A+GFL + W DPSE  GCG+F SDSW+IFC G
Sbjct:  113 WQHYCCKRMSLKTIRSSPLSLLQEAYP-DPWMHITCCVLCSRTSGSATIRSCIARFFQAFPSPSACLQGCPQAMAVLLHPLGLMQARLAAVRAVAQGFLGTDWQDPSEFKGCGKFVSDSWRIFCKG 237          
BLAST of mRNA_L-elsbetiae_contig1261.2105.1 vs. uniprot
Match: A0A5A8D4V5_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D4V5_CAFRO)

HSP 1 Score: 115 bits (287), Expect = 2.880e-27
Identity = 60/115 (52.17%), Postives = 73/115 (63.48%), Query Frame = 0
Query:  142 SPLDLLQEHYSEDAYRLLSCCILCSRTSGGDTVKNAVAAFFKACPTPTSVLSADQEE----LRETLLPLGLNREVIMKRFAEGFLASPWHDPSELHGCGRFASDSWQIFCLGSYR 252
            SP+ + QE Y  D ++LLS C+L SRTSGGD V   + AFF+  PTPT+VL   +      + E L PLGLNRE  + R AEGFL   W  PSEL+GCG+FA DSW  FC G  R
Sbjct:    3 SPMKMFQETYGYDPWKLLSGCVLSSRTSGGDRVWGPIRAFFERFPTPTAVLDEAEANGLAGMEEMLKPLGLNRERTITRAAEGFLRV-WDRPSELYGCGKFAEDSWLAFCHGEVR 116          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1261.2105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A6H5JYV6_9PHAE2.020e-10961.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDP6_ECTSI2.480e-10761.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZF17_9STRA2.840e-4259.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K0R6H7_THAOC3.230e-3448.48Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S2PHI3_9STRA3.360e-3450.39Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4MVC1_9STRA4.350e-3247.86Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A2P6VFC8_9CHLO4.460e-2943.65DNA glycosylase isoform A n=1 Tax=Micractinium con... [more]
A0A5A8DJ41_CAFRO3.240e-2852.17Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A383WAV0_TETOB9.830e-2844.44F-box domain-containing protein n=1 Tax=Tetradesmu... [more]
A0A5A8D4V5_CAFRO2.880e-2752.17Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.30coord: 133..258
e-value: 1.6E-26
score: 94.7
NoneNo IPR availablePANTHERPTHR150745-METHYLCYTOSINE G/T MISMATCH-SPECIFIC DNA GLYCOSYLASEcoord: 142..252
NoneNo IPR availablePANTHERPTHR15074:SF0METHYL-CPG-BINDING DOMAIN PROTEIN 4-LIKE PROTEINcoord: 142..252
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 141..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1261contigL-elsbetiae_contig1261:9927..12224 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1261.2105.1mRNA_L-elsbetiae_contig1261.2105.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1261 9927..12224 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1261.2105.1 ID=prot_L-elsbetiae_contig1261.2105.1|Name=mRNA_L-elsbetiae_contig1261.2105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=259bp
MAKLESLGADPLCNIVAFALGADIVALLATGRHVRATLAGSVARKHFQAL
SIARWGEGCRCHYAIAKATKTLEEDGEIIRSGSTNDVQNSAGTIEKTFKN
VSSSNSSSSSSSSSGKEKCTEEGDDWLAFFLRRVGHRAMRPSPLDLLQEH
YSEDAYRLLSCCILCSRTSGGDTVKNAVAAFFKACPTPTSVLSADQEELR
ETLLPLGLNREVIMKRFAEGFLASPWHDPSELHGCGRFASDSWQIFCLGS
YRPGDQVVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011257DNA_glycosylase