mRNA_L-elsbetiae_contig1016.209.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1016.209.1
Unique NamemRNA_L-elsbetiae_contig1016.209.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1016.209.1 vs. uniprot
Match: D7FY28_ECTSI (Phosphotriesterase-related protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY28_ECTSI)

HSP 1 Score: 536 bits (1380), Expect = 1.580e-183
Identity = 300/466 (64.38%), Postives = 346/466 (74.25%), Query Frame = 1
Query:   37 MIATVLNPLDAGSITGNCCSREELLHKASAATMKALHENPITLANLTEVRSSGERGRLAASNRLFSLDESVQELASLKKDEGGLIIMECSERSDGRDPSGLAEISRRSGVSIVMAASAKQTDGTAPQPA-PDSIGKDLEHQLLFGEHGS----PSHSHSAPTTAAAPADGAASRIQAGFILVKLYDSNSSYPLH-QGSTEATTAAPAESALLAHGDSSIAGGTSAV-LEGAVKAQHTTGAPLMLAFSHFVRWPRVKATLEMIAEQQRDTADAGTCASG----SRPVIVAGMHGGVSQSLPDQAALLSNTKGVVLCFDCFGRVEWSPGSDYYPSDEESAVRIAELVRRGFAERIVISSGVSRRIHLSRFGGHGYGHALRTIPPRLLRLGVSAEDVALMTRTNMLRLLDWYSPPPPMEIPKDYLPCSWCQKRFEPVEGEYFHKFQFVYCRSKCLRGHRDTGFGADAVA 1401
            MI TVL P+ A ++ G C SREELLH+A+ ++M A  +NPITLANL E RSSG+  R     RLFS DE VQELASLK D GG +++ECS  ++GRDPSGLAEISRR+G+ IV+ AS +QT+GTA   A P++I K+LEHQLLFGEHG+    PS + S    A A +  A +RIQAGF+LVKL  S    P   +  T A TA     A   HG     G  +A+ LEGA  AQ  TGAPLM+A SHFVRWP V A L +IA     ++  GT        SR VIVAGMHGGVSQSL  QA+LLS  KG+VLCFDCFGRVEW PG DYYPSDEESAVRIAELVR+GFAERI++SSGVSRR HLSRFGG+GYGHALRT+PPRLLRLGVSA+D+ LMTR NML LLDWY+PPPP+EIPKDYLPC WC+KRFEPVEGEYFHKFQFVYC  KCLR HRDTGF ADA A
Sbjct:    1 MIPTVLLPVAADAVAGACSSREELLHRATTSSMTAFQDNPITLANLCEARSSGDADRF----RLFSFDEGVQELASLK-DAGGGLLVECSTAAEGRDPSGLAEISRRTGLGIVLGASCQQTNGTAQYEASPETISKELEHQLLFGEHGASSAAPSFAPSPAGAAVAESASAPARIQAGFLLVKLSSSCCRSPAAVRVETPAATATAGSPAQDTHGG---LGRAAAIELEGAAMAQQATGAPLMIACSHFVRWPMVVAAL-VIATAHWGSSQDGTAXXXXXXXSRKVIVAGMHGGVSQSLHHQASLLS--KGIVLCFDCFGRVEWLPGPDYYPSDEESAVRIAELVRQGFAERIILSSGVSRRFHLSRFGGYGYGHALRTVPPRLLRLGVSAKDIGLMTRDNMLGLLDWYTPPPPIEIPKDYLPCCWCKKRFEPVEGEYFHKFQFVYCNIKCLRAHRDTGFDADAAA 455          
BLAST of mRNA_L-elsbetiae_contig1016.209.1 vs. uniprot
Match: A0A835ZDS4_9STRA (Phosphotriesterase-related protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS4_9STRA)

HSP 1 Score: 186 bits (471), Expect = 3.290e-48
Identity = 155/516 (30.04%), Postives = 228/516 (44.19%), Query Frame = 1
Query:   37 MIATVLNPLDAGSITGNCCSREELLHKASAATMKALHENPITLANLTEVRSSGERGRLAASNRLFSLDESVQELASLKKDEGGLIIMECSERSDGRDPSGLAEISRRSGVSIVMAAS---AKQTDGTAPQPAPDSIGKDLEHQLLFGEHGSPSHSHSAPTTAAAPADGAASRIQAGFILVKL-----YDSNSSYPLHQGSTEATTAAPAESALLAHGDSSIAGGTSAVLEGAVKAQHTTGA-------PLMLAFSHFVRWPRVKATLEMIAEQQRDTADAGTCASGSRPVIVAGMHGGVSQSLPDQAALLSNTKGVVLCFDCFGRVEWSPGSD---YYPSDEESAVRIAELVR---RGFAER----------------------------------------------IVISSGVSRRIHLSRFGGHGYGHALRTIPPRLLRLGVSAEDVALMTRTNMLRLLDWYSPPPPMEIPKDYLPCSWCQKRFEPVEGEYFHKFQFVYCRSKCLRGHRDTGF 1383
            MI TVL  ++A SITG    RE LL  AS        +   +L  L +++      R   + RL S+ E+VQE+ + K D GG +I++ + R   RD +GLAEISRR+GV++V AAS   A   +    Q   D+   D+++QLL G         +A +  ++ A     +IQ G  +V+L      D+     L +   +   AAP  +         +A    A L  A +AQ    A       PL++    F   P  +A L+++     D   A          ++ G     +++   +  L   + G  LCFD FGR     G+D     P D   A  +A L+    RG +                                                +++S GV++R+HL R GG GY H  R+  PRL R G +   +A  TR   L LLDW++PPP +   +++  CSWC   FE +EGEY+ KF FVYC+  CLR HRD GF
Sbjct:    1 MIPTVLGAVEASSITGAVLCREHLLRDASQGLQD---DGDFSLDRLWQIKCDPTASR--TNMRLVSVSEAVQEVQAFK-DAGGTLIIDTTLRRHRRDAAGLAEISRRTGVAVVAAASCADAYPEEAALGQSYEDAAAADIQYQLLHGVA-------AALSGGSSTAGSGGEKIQCGVAVVELAGGGDIDAQQRLELERSQWDGAPAAPPYA---------LAAAEVAQLRAAARAQCACAAACAGARPPLLVLVPPFAFAPAARAVLDVLRAVHADVVTA---------TVLCGATAAAARADALRPLL---SAGATLCFDAFGRAACDGGADAGPVLPGDAADAALVAALLSDAARGSSXXXXXXXXXAASGPSSAHGRSNIVNGHSGSSSSILGHGSXXXXXXXXGVLLSQGVTQRLHLLRGGGCGYAHVQRSAAPRLRRAGAADAAIAGATRGRALSLLDWFTPPPAVARRREFASCSWCAGAFERIEGEYYSKFAFVYCKVACLRAHRDAGF 482          
BLAST of mRNA_L-elsbetiae_contig1016.209.1 vs. uniprot
Match: A0A485LDY2_9STRA (Phosphotriesterase-related protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LDY2_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.370e-27
Identity = 76/171 (44.44%), Postives = 95/171 (55.56%), Query Frame = 1
Query:  913 ALLSNTKGVVLCFDCFGRVEWSPGSDYYP----SDEESAVRIAELV---------RRGFAERIVISSGVSRRIHLSRFGGHGYGHALRTIPPRLLRLGVSAEDVALMTRTNMLRLLDWYSPPPPMEIPKDYLPCSWCQKRFEPVEGEYFHKFQFVYCRSKCLRGHRDTGFG 1386
            ALL    GV L FD  G    S   D+ P    S ++   R A++V             A R++++S VS+ I  +R GG G  HAL +   RL   GV+A+    MT  N L LL  Y+PPPP E+PKDYL CS C + FEP+ GEYF KF FVYC +KCLR HR  GFG
Sbjct:  230 ALLQALPGVYLSFDLLGLYAVS---DHLPFPSSSSQDGPPRDADIVSCLVQLLAMNPAHAVRLLVTSTVSQTIQYTRHGGGGMTHALTSGRARLAAAGVTADQWNAMT--NPLSLLQCYTPPPPAELPKDYLVCSICARPFEPIVGEYFTKFAFVYCSTKCLRKHRIAGFG 395          
BLAST of mRNA_L-elsbetiae_contig1016.209.1 vs. uniprot
Match: W7TTG0_9STRA (Phosphotriesterase-related protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTG0_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.360e-25
Identity = 147/484 (30.37%), Postives = 213/484 (44.01%), Query Frame = 1
Query:   31 TTMIATVLNPLDAGSITGNCCSREELLHKASAATMKALHENPITLANLTEVRSSGERGRLAASNRLFSLDESVQELA-------SLKKDEGGLIIMECS-ERSDGRDP-SGLAEISRRSGVSIVMAASAKQTDGTAPQPAPDSIGKDLEHQLLFG-EHGSPSHSHSA------PTTAAAPADGAASRIQAGFI-LVKLYDSNSSYPLHQGSTEATTAAPAESALLAHGDSSIAGGTSAVLEGAVKAQHTTGAPLMLAFSHFVRWPRVKATLEMIAEQQRDTADAGTCASGSR--PVIVAGMHGGVSQSLPDQAALLSNTKGVVLCFDCFGRVEW-SPGS---DYYPSDEESAVRIAELVRRGFAERIVISSGVSRRIHLSRFGGHGYGHALRTIPPRLLRLGVSAEDVALMTRTNMLRLLDWYSPPPPMEIPKDYLPCSWCQKRFEPVEGEYFHKFQFVYCRSKCLRGHRDTGFGA--DAVAKP 1407
            TT + T L+ L  GS   +    +E L  A + +  A ++  I L+NL  +RS+   G+   + RL S DE ++EL        SL       +++  S   S  R+P S LA    +  + +V         G++    P+++  DL H+L FG E  SP  +         PT+A  P      RI  GF+ LV L       P  +G          E  LL        G  S + +         G P+ L  +H V W +     E  +E +  +   G  A G++  P++       V   L   AA+L     V L F   G   + SP +       SDEE A  ++ L   GFA RI++S  ++ R+ L ++GG GY H  + I PRLLRLGVS  D+A +   NM            +E P +   CSWC+  FE  E  YF KF +VYC S+CL  H DTG+ A  D+  KP
Sbjct:    6 TTSLETSLSVLCLGS---DGLVLDESLTSAPSMSSSAFNQEEICLSNLGAIRSNP--GQYLWNLRLPSADEMLRELEAVLELPESLSSSTSCKVVIHSSCPTSRDREPLSRLAARLEKKNIMVVTGVLPSDCQGSS---TPETMATDLVHKLKFGVEVSSPGPTSGTLPGLPGPTSALVPLK--MERIGMGFLGLVDL-------PALRGGISEEEGKRLEGVLL-----KAMGMASRLCQ---------GVPIFLT-THDV-WGQ-----EAFSESRALSIIDGVHAGGAKHAPIVFCRCPCHV-HLLRSYAAILKYDDQVHLSFSFHGNAFYASPTAALASEVASDEEGARLVSLLCEEGFASRILLSHTITCRLKLQKYGGFGYTHLPQHILPRLLRLGVSPSDLARVGGGNMRXXXXXXXXXXXVEKPVEIGTCSWCKAAFEVRENAYFSKFAYVYCTSRCLSAHGDTGWKALDDSERKP 450          
BLAST of mRNA_L-elsbetiae_contig1016.209.1 vs. uniprot
Match: A0A329S0I0_9STRA (Phosphotriesterase-related protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S0I0_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.970e-25
Identity = 60/126 (47.62%), Postives = 78/126 (61.90%), Query Frame = 1
Query:  997 PSDEESAVRIAELVR--RGFAERIVISSGVSRRIHLSRFGGHGYGHALRTIPPRLLRLGVSAEDVALMTRTNMLRLLDWYSPPPPMEIPKDYLPCSWCQKRFEPVEGEYFHKFQFVYCRSKCLRGH 1368
            P D      IA LV+    ++ +I++S+ V +RI   R+GG GY +       RLLR GVSA    L+ R N++ LL WY PP    IPK+YL CS C+K FEP+EGEYF KF F+YC +KCLR H
Sbjct:  306 PPDSRLVKWIASLVKIKPQYSSQILLSTNVHQRIQYRRYGGGGYTYLFEHFKHRLLRQGVSAAQWGLIMRENVVDLLAWYVPPEAPPIPKNYLQCSICEKYFEPIEGEYFTKFTFIYCGTKCLRRH 431          
BLAST of mRNA_L-elsbetiae_contig1016.209.1 vs. uniprot
Match: W2PXT5_PHYPN (Phosphotriesterase-related protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2PXT5_PHYPN)

HSP 1 Score: 119 bits (298), Expect = 3.440e-25
Identity = 85/233 (36.48%), Postives = 121/233 (51.93%), Query Frame = 1
Query:  715 AQHTTGAPLMLAFSHFVRWPRV--KATLEMIAEQQRDT---ADAGTCASGSRPVIVAGMHGGVSQSLPDQAALLSNTKGVVLCFD------CFGRVEWSPGSDYY--PSDEESAVRIAELVRRG--FAERIVISSGVSRRIHLSRFGGHGYGHALRTIPPRLLRLGVSAEDVALMTRTNMLRLLDWYSPPPPMEIPKDYLPCSWCQKRFEPVEGEYFHKFQFVYCRSKCLRGH 1368
            AQ  T APL L+FS   +  RV  +A L+  AE+++     AD   C  G+    +      +   L    ++L N  G++   D      C      S  ++    PSD   A  IA L++    ++ +I++S+ V +RI   R+GG GY +       RLLR G+S      + RTN++ LL WY PP    IPK+YL CS C+K FEP+EGEYF KF F+YC +KCLR H
Sbjct:  195 AQAKTHAPLYLSFSCDEQMIRVWIRALLDAGAEKKKLVVCHADR-WCGEGADCAFL------LELLLDSGVSVLFNMVGLLAVSDAMMINPCLSSTSESLDNEDQLPPSDSRLAKWIAGLMKTKPQYSSQILLSTNVHQRIQYRRYGGGGYTYLFEYFKHRLLRQGISEAQWDQIVRTNVVDLLAWYVPPEAPPIPKNYLQCSICEKYFEPIEGEYFTKFTFIYCGTKCLRRH 420          
BLAST of mRNA_L-elsbetiae_contig1016.209.1 vs. uniprot
Match: A0A8K1CPN4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPN4_PYTOL)

HSP 1 Score: 116 bits (290), Expect = 4.000e-24
Identity = 66/163 (40.49%), Postives = 86/163 (52.76%), Query Frame = 1
Query:  931 KGVVLCFDCFGRVEWSPGSDYYPS----------DEESAVRIAELVRR-GFAERIVISSGVSRRIHLSRFGGHGYGHALRTIPPRLLR-LGVSAEDVALMTRTNMLRLLDWYSPPPPMEIPKDYLPCSWCQKRFEPVEGEYFHKFQFVYCRSKCLRGHRDTGF 1383
            +GV+L FD  G    S  S   PS          D   A  IA L+   G  +++++S+ V+ R    R+GG GY +  R    RL    GV+      + R N L LL WY+PP    IPK +L CS C+K FEP+ GEYF KFQF+YC +KCLR H   GF
Sbjct:  270 RGVMLSFDAIGLYTVSDVSLTSPSLDRDSSEPPRDSTIARAIASLINNHGLTQQLLVSTNVTLRTQFQRYGGGGYAYLFRHFKGRLAEDFGVTEAHWTQIVRDNALGLLTWYTPPEAAAIPKHFLLCSICKKPFEPIVGEYFTKFQFIYCGTKCLRKHSKLGF 432          
BLAST of mRNA_L-elsbetiae_contig1016.209.1 vs. uniprot
Match: A0A6A3S731_9STRA (Phosphotriesterase-related protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3S731_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.460e-23
Identity = 57/126 (45.24%), Postives = 75/126 (59.52%), Query Frame = 1
Query:  997 PSDEESAVRIAELV--RRGFAERIVISSGVSRRIHLSRFGGHGYGHALRTIPPRLLRLGVSAEDVALMTRTNMLRLLDWYSPPPPMEIPKDYLPCSWCQKRFEPVEGEYFHKFQFVYCRSKCLRGH 1368
            P D      +A LV  +  +  +I++S+ V +RI   R+GG GY +   +   RLLR GV+A     + RTN++ LL WY PP    IPK+YL CS C   FEP+EGEYF KF F YC +KCLR H
Sbjct:  308 PPDSRLVEWVASLVNDQSRYVSQILLSTNVHQRIQYRRYGGGGYTYLFESFKHRLLRQGVTAVQWGEIVRTNVVSLLAWYIPPEAPPIPKNYLQCSICANYFEPIEGEYFTKFTFTYCGTKCLRRH 433          
BLAST of mRNA_L-elsbetiae_contig1016.209.1 vs. uniprot
Match: A0A2D4BQ76_PYTIN (Phosphotriesterase-related protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQ76_PYTIN)

HSP 1 Score: 114 bits (285), Expect = 1.670e-23
Identity = 123/412 (29.85%), Postives = 178/412 (43.20%), Query Frame = 1
Query:  238 DESVQELASLKKDEGGL-IIMECSERSDGRDPSGLAEISRRSGVSIVMAASAKQ--------TDGTAPQPAPDSIGKDLEHQLLFGEHGSPSHSHSAPTTAAAPADGAASRIQAGFILVKLYDSNSSYPLHQGSTEATTAAPAESALLAHGDSSIAGGTSAVLEGAVKAQHTTGAPLMLAFSH------FVRW-PRVKA---TLEMIAEQQRDTADAGTCASGSRPVIVAGMHGGVSQSLPDQAALLS-------NTKGVVLCFDCFGRVEWSPGSDYYPSDEESAVRIAELVRRGFAE-RIVISSGVSRRIHLSRFGGHGYGHALRTIPPRLLRL---GVSAEDVALMTRTNMLRLLDWYSPPPPMEIPKDYLPCSWCQKRFEPVEGEYFHKFQFVYCRSKCLRGHRDTGF 1383
            DE  +EL SL K   G  I+++ +   +GR    L  +S+R     ++AA++ Q         D +  Q A + I K LE +LLFG   S                  +  ++AG I  ++              +A  A   E  LLA G                 AQ  T AP+ L+FS+       + W  R++A   ++E +     D      C S S  V++        + L  +  L+S           V L   C       P     P+D   A  I +LV +   E +I+ISSGV++R+   R+GG G+ HAL     RL+     G+S     ++TR   +RLL WY+PP    IPK +L CS C   FEP+ GEYF KF F+YC +KCLR H   GF
Sbjct:   80 DEVFRELESLSKSVTGHGIVLDTTTSEEGRSADQLRRLSKRLPQVDIVAATSFQPSEIRSLSADLSFEQKA-ERIAKFLETELLFGITDS------------------SEEVRAGVIYQQV--------------DAALAMTTEDDLLARG--------------LALAQANTRAPIFLSFSYASTNDAILGWVSRLEAHGASMECVVVCHADR----WCDSDSGEVLL--------RELGHRRMLVSFDWIGLYTISDVALVNPCHSIGHVEP-----PNDRAIARCILKLVHQHNMEHQIMISSGVTQRLQFQRYGGGGFSHALLHFRRRLMTQEXPGLSPSQWRIITRETPMRLLAWYTPPEAAPIPKHFLLCSICATPFEPIVGEYFTKFSFIYCGTKCLRKHSKMGF 427          
BLAST of mRNA_L-elsbetiae_contig1016.209.1 vs. uniprot
Match: D0N4W7_PHYIT (Phosphotriesterase-related protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N4W7_PHYIT)

HSP 1 Score: 111 bits (278), Expect = 5.950e-23
Identity = 52/115 (45.22%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 1024 IAELVRRGFAERIVISSGVSRRIHLSRFGGHGYGHALRTIPPRLLRLGVSAEDVALMTRTNMLRLLDWYSPPPPMEIPKDYLPCSWCQKRFEPVEGEYFHKFQFVYCRSKCLRGH 1368
            I  L    +  ++++S+ V +RI   R+GG GY +      PR LR GVS      + R+N++ LL WY PP    IPK+YL CS C   FEP+EGEYF KF F+YC +KCLR H
Sbjct:  245 IGLLAVSDYCSQLLLSTNVHQRIQYRRYGGGGYTYLFDHFKPRFLRRGVSEAQWEQIVRSNVVDLLAWYEPPEAPPIPKNYLQCSICANYFEPIEGEYFTKFTFIYCGTKCLRRH 359          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1016.209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY28_ECTSI1.580e-18364.38Phosphotriesterase-related protein n=2 Tax=Ectocar... [more]
A0A835ZDS4_9STRA3.290e-4830.04Phosphotriesterase-related protein n=1 Tax=Tribone... [more]
A0A485LDY2_9STRA2.370e-2744.44Phosphotriesterase-related protein n=1 Tax=Aphanom... [more]
W7TTG0_9STRA1.360e-2530.37Phosphotriesterase-related protein n=2 Tax=Monodop... [more]
A0A329S0I0_9STRA2.970e-2547.62Phosphotriesterase-related protein n=2 Tax=Phytoph... [more]
W2PXT5_PHYPN3.440e-2536.48Phosphotriesterase-related protein n=8 Tax=Phytoph... [more]
A0A8K1CPN4_PYTOL4.000e-2440.49Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A3S731_9STRA1.460e-2345.24Phosphotriesterase-related protein n=3 Tax=Phytoph... [more]
A0A2D4BQ76_PYTIN1.670e-2329.85Phosphotriesterase-related protein n=1 Tax=Pythium... [more]
D0N4W7_PHYIT5.950e-2345.22Phosphotriesterase-related protein n=2 Tax=Phytoph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1016contigL-elsbetiae_contig1016:4960..7909 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score119.4
Seed ortholog evalue4.4e-24
Seed eggNOG ortholog4792.ETI40698
KEGG koko:K07048
Hectar predicted targeting categoryother localisation
EggNOG free text desc.zinc ion binding
EggNOG OGs2RDJM@2759,3QEFP@4776,COG1735@1
COG Functional cat.S
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000
Ec32 ortholog descriptionAryldialkylphosphatase
Ec32 orthologEc-27_006880.1
Exons3
Model size1909
Cds size1380
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1016.209.1prot_L-elsbetiae_contig1016.209.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1016 4996..7416 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815247.0681977-UTR-L-elsbetiae_contig1016:4959..49951622815247.0681977-UTR-L-elsbetiae_contig1016:4959..4995Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1016 4960..4995 +
1691682793.9721174-UTR-L-elsbetiae_contig1016:4959..49951691682793.9721174-UTR-L-elsbetiae_contig1016:4959..4995Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1016 4960..4995 +
1622815247.1088862-UTR-L-elsbetiae_contig1016:7416..79091622815247.1088862-UTR-L-elsbetiae_contig1016:7416..7909Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1016 7417..7909 +
1691682794.008368-UTR-L-elsbetiae_contig1016:7416..79091691682794.008368-UTR-L-elsbetiae_contig1016:7416..7909Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1016 7417..7909 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815247.0797045-CDS-L-elsbetiae_contig1016:4995..53551622815247.0797045-CDS-L-elsbetiae_contig1016:4995..5355Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1016 4996..5355 +
1691682793.982271-CDS-L-elsbetiae_contig1016:4995..53551691682793.982271-CDS-L-elsbetiae_contig1016:4995..5355Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1016 4996..5355 +
1622815247.0896142-CDS-L-elsbetiae_contig1016:5764..64711622815247.0896142-CDS-L-elsbetiae_contig1016:5764..6471Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1016 5765..6471 +
1691682793.9920166-CDS-L-elsbetiae_contig1016:5764..64711691682793.9920166-CDS-L-elsbetiae_contig1016:5764..6471Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1016 5765..6471 +
1622815247.0992799-CDS-L-elsbetiae_contig1016:7103..74161622815247.0992799-CDS-L-elsbetiae_contig1016:7103..7416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1016 7104..7416 +
1691682794.0007546-CDS-L-elsbetiae_contig1016:7103..74161691682794.0007546-CDS-L-elsbetiae_contig1016:7103..7416Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1016 7104..7416 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1016.209.1

>prot_L-elsbetiae_contig1016.209.1 ID=prot_L-elsbetiae_contig1016.209.1|Name=mRNA_L-elsbetiae_contig1016.209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=460bp
MIATVLNPLDAGSITGNCCSREELLHKASAATMKALHENPITLANLTEVR
SSGERGRLAASNRLFSLDESVQELASLKKDEGGLIIMECSERSDGRDPSG
LAEISRRSGVSIVMAASAKQTDGTAPQPAPDSIGKDLEHQLLFGEHGSPS
HSHSAPTTAAAPADGAASRIQAGFILVKLYDSNSSYPLHQGSTEATTAAP
AESALLAHGDSSIAGGTSAVLEGAVKAQHTTGAPLMLAFSHFVRWPRVKA
TLEMIAEQQRDTADAGTCASGSRPVIVAGMHGGVSQSLPDQAALLSNTKG
VVLCFDCFGRVEWSPGSDYYPSDEESAVRIAELVRRGFAERIVISSGVSR
RIHLSRFGGHGYGHALRTIPPRLLRLGVSAEDVALMTRTNMLRLLDWYSP
PPPMEIPKDYLPCSWCQKRFEPVEGEYFHKFQFVYCRSKCLRGHRDTGFG
ADAVAKPTV*
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mRNA from alignment at L-elsbetiae_contig1016:4960..7909+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1016.209.1 ID=mRNA_L-elsbetiae_contig1016.209.1|Name=mRNA_L-elsbetiae_contig1016.209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2950bp|location=Sequence derived from alignment at L-elsbetiae_contig1016:4960..7909+ (Laminarionema elsbetiae ELsaHSoW15)
GGCGTAGCGTTTGTCTGACTCCTTCTCTTGACCACGATGATCGCCACGGT GCTTAACCCGTTAGACGCTGGCAGCATCACAGGCAATTGCTGCAGCCGCG AAGAATTGCTGCACAAGGCGTCTGCTGCAACCATGAAGGCTCTCCACGAG AACCCCATTACGCTGGCTAACCTTACGGAGGTCAGGAGTAGCGGTGAAAG AGGCCGTCTGGCCGCTAGTAATCGTTTGTTCTCGCTAGACGAGAGCGTGC AAGAGCTAGCTTCGTTGAAGAAGGACGAGGGTGGATTGATAATCATGGAA TGCTCGGAGCGTAGCGACGGCCGGGATCCGTCAGGTCTGGCGGAGATCTC CAGAAGAAGCGGAGTGAGCATTGTGATGGCCGCTTCCGCGAAACAGGTGG GTGCATGTGACATGGACTCTGTGTATTTTCCCTCGAGTCATCTTCAACTG CGGTGCTGCAGCAATGAACCTCCGTGCTTCGAAGGACACACGGCGATTAT CTGCGTTCGAACATAAGTTACGTACGTATGTACATATATTTAGTCTAGCA AGAGAGAAATGGTATGTAGCAATGTCCCGTAGCGCATGCGCCCGGCACAT TGGTAGATTGAACTTGGCTCACCAAGGACGGCAAGTAGAGTTGTTCCACA AACGCACTACTGCTTGCTGTTGCAATGATGTGTGGCCCCATCACCTCCTC TCTGGTATAAACCCAGTGTATGGGGCGAAAGGCTCTTTACTTTGTAGTTG TCCTGGCTTCCTTCGATGTGTAACCCCCCTCCATTTATTATTTTATCCCA CCCAGACGGACGGCACGGCACCGCAGCCGGCGCCAGACTCCATCGGCAAG GACCTGGAACATCAGCTTCTCTTCGGAGAACACGGAAGCCCTTCTCATTC TCACTCTGCTCCCACTACCGCTGCTGCACCGGCTGATGGTGCAGCTTCCA GGATTCAAGCTGGGTTCATCCTCGTCAAGCTCTATGATAGTAACAGCAGT TACCCTCTCCACCAAGGGTCGACAGAAGCTACTACAGCCGCTCCTGCAGA AAGCGCTCTACTGGCGCATGGTGACAGCAGTATTGCTGGTGGCACAAGCG CGGTCCTGGAAGGGGCGGTGAAGGCACAACACACCACAGGAGCGCCGCTC ATGTTAGCTTTCTCTCATTTCGTGCGGTGGCCGAGGGTGAAAGCCACTCT TGAGATGATAGCCGAGCAACAGAGAGACACGGCGGATGCTGGTACATGTG CGTCAGGGTCGAGACCGGTGATCGTGGCAGGTATGCACGGTGGCGTGTCT CAATCGCTCCCAGACCAAGCTGCGCTGCTGAGCAATACCAAGGGGGTGGT CTTGTGTTTCGACTGCTTCGGAAGAGTGGAATGGTCGCCTGGGTCGGACT ACTACCCTTCGGACGAGGAGAGCGCTGTGAGGATTGCGGAGCTCGTGCGG CGGGGATTTGCGGAGCGGATAGTAATATCGTCGGGGGTGTCTCGACGCAT TCATCTTTCCAGGTTGGCGGTTTGTTGTGCCGAGCGAGAGAAGAAAACTT TACTGTTCGATTTGTCTTTGGGGCATCTCACTCGCCCGACTGGCTTCAGT GGAAGAACATTAAAATTGGCATATGTCTCAACATGTAAACTGCTACTTCC GCGTTGCACGAGAGTGGAAATATATGCATTCACTCCAGTGTTGTGGTGAC TTAGCCTTTTTCCTGTCAGGTCTTCTCGTTGGCGTCTTGGTTCTTGAGTA GCCCATTTACCCTCAAGTGTGACCCTGATGTGCGAATTCTCATCGGCACA CAGGTGCCTGCACCATACCTACGTTCGTCCTCCCACCCATGTGCATTGTT CAGCCAAAGGGAAAGCCAAGCCTTGTGCGCATGTTTCCAGTTCAACACTA ACCCACACGCCTTGCTCCTCACCAAAAGTAGGTCAGGTCTAGTCTTGCTG GATACATACGCCCACCCTCCTCCCGCCCCTTTCTATGTACCGAAAAGCTC TTTCTCTCGTCTAGCCTTGTTTGTACTCCCTTTGTCAGCGTCCGTGTCGG CCTGGTGTTTTCTCTTTCGGCCACCGCTAACACCTGTGTGTCCTTGCGTC GCGTGTTGTGTGTGCGCTCCTCCTATGGTGCAACCCTGACCAAGGTTTGG AGGACACGGCTACGGCCACGCCTTGCGTACCATCCCGCCGCGCCTGCTTC GCCTCGGGGTAAGCGCGGAAGACGTCGCACTCATGACTAGAACAAACATG CTGCGGCTGTTGGACTGGTACAGCCCGCCTCCTCCTATGGAGATCCCGAA GGACTACTTGCCGTGCTCTTGGTGCCAGAAACGCTTCGAGCCCGTGGAGG GGGAATATTTTCACAAGTTCCAGTTTGTTTATTGCAGGAGCAAGTGCCTG CGTGGTCACCGAGACACTGGGTTCGGTGCGGATGCTGTTGCGAAACCAAC GGTGTAGACGAGAAAGATGCAAGAGAAGGCTCTGGGCAAGTCTCTCCTTC TGCGGCGAGCTGGTTTGGTACGAGAGAATATGTAGCGATAGCATTGTCCT TGAGGTTCAGTGCCAGTGCACTCGACGTGGAAGGCTTGGAGTTTCTGTCA AATAAAGCTACTCTACTATAATCCAGAAAAGTTTGTTTCAGTTGGTGGCA AGTCAGCGCCAGCCGAATAATTAGTGGCGGGAGTTGGCACCAACATTTAA CACTCTTTGTAAGAGGCGACAAGCAGAAGTGTTGATGGCGTTGATCTTCC ATCTAAGAAGTTTGTGCAGCACATATGATGTGTTCTGGGAGGGGGGTGTG GTAACAGGCAACGCGTTTTGTTTGATGGGTTGTGGTAGAGAAGTGAACCA AGGGGATGAATCCTGGCTTACCAACACATTATTGTACGTTGTACTGAAGT TATCTTTTAGTCTACATTTCTGAGTGGCAATAATTGAACATTTCCTAAAT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1016:4960..7909+

>mRNA_L-elsbetiae_contig1016.209.1 ID=mRNA_L-elsbetiae_contig1016.209.1|Name=mRNA_L-elsbetiae_contig1016.209.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2760bp|location=Sequence derived from alignment at L-elsbetiae_contig1016:4960..7909+ (Laminarionema elsbetiae ELsaHSoW15)
ATGATCGCCACGGTGCTTAACCCGTTAGACGCTGGCAGCATCACAGGCAA
TTGCTGCAGCCGCGAAGAATTGCTGCACAAGGCGTCTGCTGCAACCATGA
AGGCTCTCCACGAGAACCCCATTACGCTGGCTAACCTTACGGAGGTCAGG
AGTAGCGGTGAAAGAGGCCGTCTGGCCGCTAGTAATCGTTTGTTCTCGCT
AGACGAGAGCGTGCAAGAGCTAGCTTCGTTGAAGAAGGACGAGGGTGGAT
TGATAATCATGGAATGCTCGGAGCGTAGCGACGGCCGGGATCCGTCAGGT
CTGGCGGAGATCTCCAGAAGAAGCGGAGTGAGCATTGTGATGGCCGCTTC
CGCGAAACAGATGATCGCCACGGTGCTTAACCCGTTAGACGCTGGCAGCA
TCACAGGCAATTGCTGCAGCCGCGAAGAATTGCTGCACAAGGCGTCTGCT
GCAACCATGAAGGCTCTCCACGAGAACCCCATTACGCTGGCTAACCTTAC
GGAGGTCAGGAGTAGCGGTGAAAGAGGCCGTCTGGCCGCTAGTAATCGTT
TGTTCTCGCTAGACGAGAGCGTGCAAGAGCTAGCTTCGTTGAAGAAGGAC
GAGGGTGGATTGATAATCATGGAATGCTCGGAGCGTAGCGACGGCCGGGA
TCCGTCAGGTCTGGCGGAGATCTCCAGAAGAAGCGGAGTGAGCATTGTGA
TGGCCGCTTCCGCGAAACAGACGGACGGCACGGCACCGCAGCCGGCGCCA
GACTCCATCGGCAAGGACCTGGAACATCAGCTTCTCTTCGGAGAACACGG
AAGCCCTTCTCATTCTCACTCTGCTCCCACTACCGCTGCTGCACCGGCTG
ATGGTGCAGCTTCCAGGATTCAAGCTGGGTTCATCCTCGTCAAGCTCTAT
GATAGTAACAGCAGTTACCCTCTCCACCAAGGGTCGACAGAAGCTACTAC
AGCCGCTCCTGCAGAAAGCGCTCTACTGGCGCATGGTGACAGCAGTATTG
CTGGTGGCACAAGCGCGGTCCTGGAAGGGGCGGTGAAGGCACAACACACC
ACAGGAGCGCCGCTCATGTTAGCTTTCTCTCATTTCGTGCGGTGGCCGAG
GGTGAAAGCCACTCTTGAGATGATAGCCGAGCAACAGAGAGACACGGCGG
ATGCTGGTACATGTGCGTCAGGGTCGAGACCGGTGATCGTGGCAGGTATG
CACGGTGGCGTGTCTCAATCGCTCCCAGACCAAGCTGCGCTGCTGAGCAA
TACCAAGGGGGTGGTCTTGTGTTTCGACTGCTTCGGAAGAGTGGAATGGT
CGCCTGGGTCGGACTACTACCCTTCGGACGAGGAGAGCGCTGTGAGGATT
GCGGAGCTCGTGCGGCGGGGATTTGCGGAGCGGATAGTAATATCGTCGGG
GGTGTCTCGACGCATTCATCTTTCCAGACGGACGGCACGGCACCGCAGCC
GGCGCCAGACTCCATCGGCAAGGACCTGGAACATCAGCTTCTCTTCGGAG
AACACGGAAGCCCTTCTCATTCTCACTCTGCTCCCACTACCGCTGCTGCA
CCGGCTGATGGTGCAGCTTCCAGGATTCAAGCTGGGTTCATCCTCGTCAA
GCTCTATGATAGTAACAGCAGTTACCCTCTCCACCAAGGGTCGACAGAAG
CTACTACAGCCGCTCCTGCAGAAAGCGCTCTACTGGCGCATGGTGACAGC
AGTATTGCTGGTGGCACAAGCGCGGTCCTGGAAGGGGCGGTGAAGGCACA
ACACACCACAGGAGCGCCGCTCATGTTAGCTTTCTCTCATTTCGTGCGGT
GGCCGAGGGTGAAAGCCACTCTTGAGATGATAGCCGAGCAACAGAGAGAC
ACGGCGGATGCTGGTACATGTGCGTCAGGGTCGAGACCGGTGATCGTGGC
AGGTATGCACGGTGGCGTGTCTCAATCGCTCCCAGACCAAGCTGCGCTGC
TGAGCAATACCAAGGGGGTGGTCTTGTGTTTCGACTGCTTCGGAAGAGTG
GAATGGTCGCCTGGGTCGGACTACTACCCTTCGGACGAGGAGAGCGCTGT
GAGGATTGCGGAGCTCGTGCGGCGGGGATTTGCGGAGCGGATAGTAATAT
CGTCGGGGGTGTCTCGACGCATTCATCTTTCCAGGTTTGGAGGACACGGC
TACGGCCACGCCTTGCGTACCATCCCGCCGCGCCTGCTTCGCCTCGGGGT
AAGCGCGGAAGACGTCGCACTCATGACTAGAACAAACATGCTGCGGCTGT
TGGACTGGTACAGCCCGCCTCCTCCTATGGAGATCCCGAAGGACTACTTG
CCGTGCTCTTGGTGCCAGAAACGCTTCGAGCCCGTGGAGGGGGAATATTT
TCACAAGTTCCAGTTTGTTTATTGCAGGAGCAAGTGCCTGCGTGGTCACC
GAGACACTGGGTTCGGTGCGGATGCTGTTGCGAAACCAACGGTGTAGGTT
TGGAGGACACGGCTACGGCCACGCCTTGCGTACCATCCCGCCGCGCCTGC
TTCGCCTCGGGGTAAGCGCGGAAGACGTCGCACTCATGACTAGAACAAAC
ATGCTGCGGCTGTTGGACTGGTACAGCCCGCCTCCTCCTATGGAGATCCC
GAAGGACTACTTGCCGTGCTCTTGGTGCCAGAAACGCTTCGAGCCCGTGG
AGGGGGAATATTTTCACAAGTTCCAGTTTGTTTATTGCAGGAGCAAGTGC
CTGCGTGGTCACCGAGACACTGGGTTCGGTGCGGATGCTGTTGCGAAACC
AACGGTGTAG
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