mRNA_L-elsbetiae_contig12573.2079.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12573.2079.1 vs. uniprot
Match: A0A4U9F714_GIBZA (Protein SSH4 n=3 Tax=Gibberella zeae TaxID=5518 RepID=A0A4U9F714_GIBZA) HSP 1 Score: 54.7 bits (130), Expect = 2.730e-6 Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 61 LHPAVRGVHDNLVTQLLRLGASPTAKDEHGEAPIHIAASLGRAKVVKTLLETEEVDEFEVDAKGRTAAH 267
LH AV +D LV +LL +GA + + ++P+ +A SLGR K+VKT+LE++ + D KG+ A H
Sbjct: 650 LHLAVHRKNDELVGRLLSMGAHLSTNKDKSQSPLMLACSLGRLKMVKTMLESKSRAAEDQDGKGKLALH 718
BLAST of mRNA_L-elsbetiae_contig12573.2079.1 vs. uniprot
Match: UPI00021F17A7 (hypothetical protein n=1 Tax=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) TaxID=229533 RepID=UPI00021F17A7) HSP 1 Score: 52.8 bits (125), Expect = 1.180e-5 Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 61 LHPAVRGVHDNLVTQLLRLGASPTAKDEHGEAPIHIAASLGRAKVVKTLLETEEVDEFEVDAKGRTAAH 267
LH AV +D LV +LL +GA + + ++P+ +A SLGR K+V T+LE++ + D KG+ A H
Sbjct: 154 LHLAVHRKNDELVGRLLSMGAHLSTNKDKSQSPLTLACSLGRLKMVNTMLESKSRAAEDQDGKGKLALH 222
BLAST of mRNA_L-elsbetiae_contig12573.2079.1 vs. uniprot
Match: A0A098DAZ8_GIBZE (Protein SSH4 n=1 Tax=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) TaxID=229533 RepID=A0A098DAZ8_GIBZE) HSP 1 Score: 52.8 bits (125), Expect = 1.290e-5 Identity = 27/69 (39.13%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 61 LHPAVRGVHDNLVTQLLRLGASPTAKDEHGEAPIHIAASLGRAKVVKTLLETEEVDEFEVDAKGRTAAH 267
LH AV +D LV +LL +GA + + ++P+ +A SLGR K+V T+LE++ + D KG+ A H
Sbjct: 810 LHLAVHRKNDELVGRLLSMGAHLSTNKDKSQSPLTLACSLGRLKMVNTMLESKSRAAEDQDGKGKLALH 878
BLAST of mRNA_L-elsbetiae_contig12573.2079.1 vs. uniprot
Match: A0A0N4ZIB5_PARTI (ANK_REP_REGION domain-containing protein n=1 Tax=Parastrongyloides trichosuri TaxID=131310 RepID=A0A0N4ZIB5_PARTI) HSP 1 Score: 52.4 bits (124), Expect = 1.790e-5 Identity = 31/91 (34.07%), Postives = 46/91 (50.55%), Query Frame = 1
Query: 61 LHPAVRGVHDNLVTQLLRLGASPTAKDEHGEAPIHIAASLGRAKVVKTLLETEEVDE---FEVDAKGRTAAHPACWNGDVPTVEALMDGSK 324
LH A + + L+ GA+P+AKD+ G+ P+H+AA +VVK L+ ++ + VD G T AH A G V+ LM K
Sbjct: 948 LHYAAKFGQLGVAQALMAFGANPSAKDDKGQTPLHLAAENDYPEVVKLFLKMKQSNMQVLTAVDGNGFTCAHIAAMKGSYAVVKQLMSIDK 1038
BLAST of mRNA_L-elsbetiae_contig12573.2079.1 vs. uniprot
Match: G1X1G2_ARTOA (Uncharacterized protein n=2 Tax=Orbilia oligospora TaxID=2813651 RepID=G1X1G2_ARTOA) HSP 1 Score: 51.6 bits (122), Expect = 2.990e-5 Identity = 38/104 (36.54%), Postives = 51/104 (49.04%), Query Frame = 1
Query: 22 STALLKAGVTGGHLHPAVRGVHDNLVTQLLRLGASPTAKDEH-GEAPIHIAASLGRAKVVKTLL----ETEEVDEFEVDAKGRTAAHPACWNGDVPTVEALMDG 318
S LK G+ L AV + LL GA+P + + +H+AASLGR K+VK LL + EEV++ D G T H AC NG V+ L+ G
Sbjct: 241 SIGKLKGGLGANALMKAVECNYPQTTKLLLEAGANPKSTEPGTSTTALHLAASLGREKIVKYLLKYINDKEEVNKS--DDNGDTPLHRACVNGHYKCVKLLLKG 342
BLAST of mRNA_L-elsbetiae_contig12573.2079.1 vs. uniprot
Match: A0A0K0F903_STRVS (ANK_REP_REGION domain-containing protein n=2 Tax=Strongyloides TaxID=6247 RepID=A0A0K0F903_STRVS) HSP 1 Score: 50.8 bits (120), Expect = 6.200e-5 Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 1
Query: 106 LLRLGASPTAKDEHGEAPIHIAASLGRAKVVKTLLETEEVDE---FEVDAKGRTAAHPACWNGDVPTVEALM 312
LL GA+P+AKD+ G+ P+H+AA VVK L+ ++ + VD G T AH A G V+ LM
Sbjct: 967 LLAFGANPSAKDDKGQTPLHLAAENDYPDVVKLFLKMKQNNRQVLTAVDGNGFTCAHIAAMKGSYAVVKELM 1038
BLAST of mRNA_L-elsbetiae_contig12573.2079.1 vs. uniprot
Match: A0A0K0EEQ0_STRER (ANK_REP_REGION domain-containing protein n=1 Tax=Strongyloides stercoralis TaxID=6248 RepID=A0A0K0EEQ0_STRER) HSP 1 Score: 50.8 bits (120), Expect = 6.200e-5 Identity = 28/72 (38.89%), Postives = 39/72 (54.17%), Query Frame = 1
Query: 106 LLRLGASPTAKDEHGEAPIHIAASLGRAKVVKTLLETEEVDE---FEVDAKGRTAAHPACWNGDVPTVEALM 312
LL GA+P+AKD+ G+ P+H+AA VVK L+ ++ + VD G T AH A G V+ LM
Sbjct: 979 LLAFGANPSAKDDKGQTPLHLAAENDYPDVVKLFLKMKQNNRQVLTAVDGNGFTCAHIAAMKGSYAVVKELM 1050
BLAST of mRNA_L-elsbetiae_contig12573.2079.1 vs. uniprot
Match: A0A090MYR6_STRRB (No mechanoreceptor potential C n=1 Tax=Strongyloides ratti TaxID=34506 RepID=A0A090MYR6_STRRB) HSP 1 Score: 50.4 bits (119), Expect = 8.460e-5 Identity = 27/72 (37.50%), Postives = 39/72 (54.17%), Query Frame = 1
Query: 106 LLRLGASPTAKDEHGEAPIHIAASLGRAKVVKTLLETEEVDE---FEVDAKGRTAAHPACWNGDVPTVEALM 312
LL GA+P+AKD+ G+ P+H+AA VVK L+ ++ + +D G T AH A G V+ LM
Sbjct: 960 LLAFGANPSAKDDKGQTPLHLAAENDYPDVVKLFLKMKQNNRQVLTAIDGNGFTCAHIAAMKGSYAVVKELM 1031 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12573.2079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12573.2079.1 >prot_L-elsbetiae_contig12573.2079.1 ID=prot_L-elsbetiae_contig12573.2079.1|Name=mRNA_L-elsbetiae_contig12573.2079.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp AAGDAPLSTALLKAGVTGGHLHPAVRGVHDNLVTQLLRLGASPTAKDEHGback to top mRNA from alignment at L-elsbetiae_contig12573:1469..1804+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12573.2079.1 ID=mRNA_L-elsbetiae_contig12573.2079.1|Name=mRNA_L-elsbetiae_contig12573.2079.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=336bp|location=Sequence derived from alignment at L-elsbetiae_contig12573:1469..1804+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12573:1469..1804+ >mRNA_L-elsbetiae_contig12573.2079.1 ID=mRNA_L-elsbetiae_contig12573.2079.1|Name=mRNA_L-elsbetiae_contig12573.2079.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=672bp|location=Sequence derived from alignment at L-elsbetiae_contig12573:1469..1804+ (Laminarionema elsbetiae ELsaHSoW15)back to top |