mRNA_L-elsbetiae_contig10.19.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10.19.1
Unique NamemRNA_L-elsbetiae_contig10.19.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig10.19.1 vs. uniprot
Match: D1J792_ECTSI (ATP synthase subunit a, chloroplastic n=40 Tax=Phaeophyceae TaxID=2870 RepID=D1J792_ECTSI)

HSP 1 Score: 474 bits (1221), Expect = 6.160e-169
Identity = 242/247 (97.98%), Postives = 244/247 (98.79%), Query Frame = 1 
Query:    1 MNILQSTNTINLNSLTFLSDIEVGKHLYWEVNDITFHGQVIIVSSFVILLTFLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAQNQLGKEYRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 741
            MNILQSTNTINLNSL FLSDIEVGKHLYWEVNDITFHGQVI+VSS VILLT LFSFLGTSNKNIVPNGWQNFMESVVEFVKEIA+NQLGKEYRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH
Sbjct:    1 MNILQSTNTINLNSLIFLSDIEVGKHLYWEVNDITFHGQVILVSSLVILLTLLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAENQLGKEYRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 247
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BLAST of mRNA_L-elsbetiae_contig10.19.1 vs. uniprot
Match: A0A8F0F721_9PHAE (ATP synthase CF0 A subunit subunit IV n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F721_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 6.160e-151
Identity = 217/248 (87.50%), Postives = 229/248 (92.34%), Query Frame = 1 
Query:    1 MNILQSTNTINLNSLTFLSDIEVGKHLYWEVNDITFHGQVIIVSSFVILLTFLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAQNQLGK-EYRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 741
            M+I Q+ N   LNSL FL+DIEVGKHLYWE NDITFHGQV+IVSS VIL+  LFS  GTSNK  +P GWQNFME+VVEFVK+IAQNQLG   YRPWLPFIGTLFLF+FGCNWAGA+IPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGN+LADELTVSVL LLVPLIVPLPVM+LGVFASSVQALIFSTLAGAYIAEAVEGH
Sbjct:    1 MDIFQNENFSGLNSLIFLADIEVGKHLYWEFNDITFHGQVLIVSSLVILMILLFSIFGTSNKEAIPTGWQNFMEAVVEFVKDIAQNQLGATNYRPWLPFIGTLFLFIFGCNWAGALIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTLLVPLIVPLPVMVLGVFASSVQALIFSTLAGAYIAEAVEGH 248
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BLAST of mRNA_L-elsbetiae_contig10.19.1 vs. uniprot
Match: A0A141BSD6_9PHAE (ATP synthase subunit a, chloroplastic n=14 Tax=Fucales TaxID=3009 RepID=A0A141BSD6_9PHAE)

HSP 1 Score: 425 bits (1092), Expect = 2.920e-149
Identity = 211/248 (85.08%), Postives = 231/248 (93.15%), Query Frame = 1 
Query:    1 MNILQSTNTINLNSLTFLSDIEVGKHLYWEVNDITFHGQVIIVSSFVILLTFLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAQNQLGKE-YRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 741
            MN LQS++ IN +SL FLSDIEVGKH Y E+N ITFHGQV++VSS VIL+ FLFSFLGTSNKNI+PNGWQNFMESVVEF+K+IA NQLG+  YRPWLPFIGT+FLFVFGCNWAGA+IPWKLIKL+EGEF APTNDINTTVALALLTSF YFYAG STKGFGYFKRYIEPTP+LLPINILEDFTKPLSLSFRLFGN+LADELTVSVL +LVPL +PLPVMLLGVFASSVQALIFSTLAGAYIAE++EGH
Sbjct:    1 MNTLQSSSLINFDSLLFLSDIEVGKHFYLELNGITFHGQVLVVSSIVILIVFLFSFLGTSNKNIIPNGWQNFMESVVEFIKDIAVNQLGESAYRPWLPFIGTIFLFVFGCNWAGAVIPWKLIKLNEGEFAAPTNDINTTVALALLTSFTYFYAGFSTKGFGYFKRYIEPTPILLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTVLVPLFIPLPVMLLGVFASSVQALIFSTLAGAYIAESIEGH 248
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BLAST of mRNA_L-elsbetiae_contig10.19.1 vs. uniprot
Match: D1GJH7_FUCVE (ATP synthase subunit a, chloroplastic n=5 Tax=Fucales TaxID=3009 RepID=D1GJH7_FUCVE)

HSP 1 Score: 414 bits (1064), Expect = 6.690e-145
Identity = 210/241 (87.14%), Postives = 222/241 (92.12%), Query Frame = 1 
Query:    1 MNILQSTNTINLNSLTFLSDIEVGKHLYWEVNDITFHGQVIIVSSFVILLTFLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAQNQLGKE-YRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYI 720
            MN  QSTN IN  SL FLSDIEVGK LY E+N ITFHGQV+IVSSFVILL FLFS LGT NKNI+PNGWQNFMESVVEF+K+IA NQLG+  YRPWLPFIGT+FLFVFGCNWAGAIIPWKLIKL EGEF APTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTP+LLPINILEDFTKPLSLSFRLFGN+LADELTVSVL +LVPL +PLPVMLLGVFASSVQALIFSTLAGAY+
Sbjct:    1 MNTFQSTNFINFKSLIFLSDIEVGKRLYLELNGITFHGQVLIVSSFVILLVFLFSLLGTLNKNIIPNGWQNFMESVVEFIKDIAVNQLGESAYRPWLPFIGTIFLFVFGCNWAGAIIPWKLIKLPEGEFAAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPILLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTVLVPLFIPLPVMLLGVFASSVQALIFSTLAGAYL 241
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BLAST of mRNA_L-elsbetiae_contig10.19.1 vs. uniprot
Match: A0A8E6D5Q8_9PHAE (ATP synthase subunit a, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D5Q8_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 4.420e-144
Identity = 211/248 (85.08%), Postives = 225/248 (90.73%), Query Frame = 1 
Query:    1 MNILQSTNTINLNSLTFLSDIEVGKHLYWEVNDITFHGQVIIVSSFVILLTFLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAQNQLGKE-YRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 741
            M+ +Q  N  NL S   LSD+EVGKHLY E+  ITFHGQV+IVSS VIL+  LF+FLGTS +  VP GWQNFMESVVEFVK+IAQNQLG+  YRPWLPFIGTLFLF+FGCNWAGA+IPWKLIKLSEGEFGAPTNDINTTVAL+LLTSFMYFYAGLSTKG GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLI+PLPVMLLGVFASSVQALIFSTLAGAYIAEAVE H
Sbjct:    1 MDTVQYINFTNLKSSLILSDVEVGKHLYLEIGTITFHGQVLIVSSIVILVIILFAFLGTSRRKTVPEGWQNFMESVVEFVKDIAQNQLGESAYRPWLPFIGTLFLFIFGCNWAGALIPWKLIKLSEGEFGAPTNDINTTVALSLLTSFMYFYAGLSTKGLGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIIPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEEH 248
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BLAST of mRNA_L-elsbetiae_contig10.19.1 vs. uniprot
Match: A0A7S6U9W7_9STRA (ATP synthase subunit a, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9W7_9STRA)

HSP 1 Score: 389 bits (998), Expect = 5.680e-135
Identity = 192/246 (78.05%), Postives = 219/246 (89.02%), Query Frame = 1 
Query:    1 MNILQSTNTINLNSLTFLSDIEVGKHLYWEVNDITFHGQVIIVSSFVILLTFLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAQNQLGKE-YRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVE 735
            M+ +Q+T +I+LNSL FLS +EVGKH YWE   ITFHGQV++VS FVI L  LF+ LGT NK  VP GWQNFME+V+EF ++IAQNQLGK  Y+PW+PFI TLFLF+FGCNWAGA+IPWKLIKLSEGE  APTNDINTTVALALLTSFMYFYAG+S KG GYFKRY+EPTP+LLPINILEDFTKPLSLSFRLFGN+LADELTVSVL +LVPLI+PLP+M+LG+FASSVQALIFSTLA AYIAEA+E
Sbjct:    1 MDFVQTTTSIDLNSLFFLSGVEVGKHFYWEFAGITFHGQVLLVSWFVIALLLLFTLLGTLNKQRVPTGWQNFMEAVIEFTQDIAQNQLGKTFYKPWVPFISTLFLFIFGCNWAGALIPWKLIKLSEGELAAPTNDINTTVALALLTSFMYFYAGISKKGLGYFKRYLEPTPILLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTMLVPLIIPLPIMVLGIFASSVQALIFSTLAAAYIAEALE 246
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BLAST of mRNA_L-elsbetiae_contig10.19.1 vs. uniprot
Match: A0A2I4Q287_9PHAE (ATP synthase subunit a, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q287_9PHAE)

HSP 1 Score: 376 bits (966), Expect = 1.060e-129
Identity = 194/248 (78.23%), Postives = 215/248 (86.69%), Query Frame = 1 
Query:    1 MNILQSTNTINLNSLTFLSDIEVGKHLYWEVNDITFHGQVIIVSSFVILLTFLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAQNQLGK-EYRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 741
            M+I+Q T    L+SL FL+DIEVGKH YWE++ ITFHGQV+IVSS V+ L FL SF GT++K ++P   QNFME VV FVK+IA NQ+G   Y+PWLPF+G LFLF+FGCN AGA+IPWKLIKL EGEFGAPTNDINTTVALALLTSFMYFYAG+S KGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVL LLVPLI PLPVM LGVFASSVQALIFSTLA AYI E++EG 
Sbjct:    1 MDIVQQT---KLSSLIFLTDIEVGKHFYWEISGITFHGQVLIVSSLVLALIFLLSFWGTADKQLIPKTGQNFMELVVLFVKDIAVNQIGAGSYKPWLPFVGNLFLFIFGCNLAGALIPWKLIKLPEGEFGAPTNDINTTVALALLTSFMYFYAGISKKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLVLLVPLIAPLPVMALGVFASSVQALIFSTLAAAYIGESLEGE 245
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BLAST of mRNA_L-elsbetiae_contig10.19.1 vs. uniprot
Match: B7T1S1_VAULI (ATP synthase subunit a, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1S1_VAULI)

HSP 1 Score: 371 bits (952), Expect = 1.120e-127
Identity = 188/248 (75.81%), Postives = 212/248 (85.48%), Query Frame = 1 
Query:    1 MNILQSTNTINLNSLTFLSDIEVGKHLYWEVNDITFHGQVIIVSSFVILLTFLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAQNQLG-KEYRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 741
            M+ LQS N+IN +S   LS++EVGKH YWE+  IT HGQV IVS FVI L  LF+FLGTSN   +P+ +QNFMESVVEF K+IA NQLG  EYRPWL FIGTLFLF+ GCNWAGA+IPWKLIKL EGE  APTNDINTTVALALLTS  YF+AGL  KG GYFKRY++PTP+LLPINILEDFTKPLSLSFRLFGNILADELTV+VL +LVPLI+PLP+M+LGVFASS+QALIFSTLA AYI+EAVE H
Sbjct:   18 MDFLQSMNSINPSSFLLLSEVEVGKHFYWEIRGITLHGQVFIVSWFVIFLILLFTFLGTSNIQKIPSNFQNFMESVVEFTKKIAVNQLGHSEYRPWLSFIGTLFLFILGCNWAGALIPWKLIKLPEGELSAPTNDINTTVALALLTSGTYFFAGLQKKGIGYFKRYLQPTPVLLPINILEDFTKPLSLSFRLFGNILADELTVTVLTMLVPLIIPLPIMVLGVFASSIQALIFSTLAAAYISEAVELH 265
[Close]
BLAST of mRNA_L-elsbetiae_contig10.19.1 vs. uniprot
Match: A0T0N9_THAPS (ATP synthase subunit a, chloroplastic n=24 Tax=Bacillariophyta TaxID=2836 RepID=A0T0N9_THAPS)

HSP 1 Score: 352 bits (903), Expect = 1.430e-120
Identity = 171/233 (73.39%), Postives = 199/233 (85.41%), Query Frame = 1 
Query:   40 SLTFLSDIEVGKHLYWEVNDITFHGQVIIVSSFVILLTFLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAQNQLGKE-YRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVE 735
            + TFL++ EVGKH YW +     HGQV++V  FV+LL  +FSFLGT   + +P+ WQNFMES ++FV +IA+NQLG+  YR W+PFIGTLFLF+FGCNWAGA+IPWKLI+L EGEF APTNDINTTVALALLTSF YFYAGLS KG GYFKRY+ P PLLLPINILEDFTKPLSLSFRLFGN+LADELTV+VL  LVPL++PLP+MLLG+FA SVQALIFSTLA AYIAEA+E
Sbjct:   10 TFTFLAEAEVGKHFYWNIAGFLVHGQVLVVIWFVVLLLLIFSFLGTREADRIPHSWQNFMESALDFVVDIARNQLGESFYREWIPFIGTLFLFIFGCNWAGAVIPWKLIQLPEGEFAAPTNDINTTVALALLTSFSYFYAGLSKKGLGYFKRYVNPIPLLLPINILEDFTKPLSLSFRLFGNVLADELTVTVLTSLVPLVIPLPIMLLGIFAGSVQALIFSTLAAAYIAEALE 242
[Close]
BLAST of mRNA_L-elsbetiae_contig10.19.1 vs. uniprot
Match: A0A023JER3_9STRA (ATP synthase subunit a, chloroplastic n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A023JER3_9STRA)

HSP 1 Score: 350 bits (899), Expect = 5.820e-120
Identity = 171/236 (72.46%), Postives = 201/236 (85.17%), Query Frame = 1 
Query:   31 NLNSLTFLSDIEVGKHLYWEVNDITFHGQVIIVSSFVILLTFLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAQNQLGKE-YRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVE 735
            N N+ T L++ EVGKH YW +     HGQV+IV  FV+L+  + SFLGT N + +P+GWQNFME+ V+FV +IA++QLG+  Y+ W+P+IGTLFLF+FGCNWAGA+IPWKLI+L EGE  APTNDINTTVALALLTSF YFYAGLS KG GYFKRY++P PLLLPINILEDFTKPLSLSFRLFGN+LADELTVSVL  LVPL+VPLP+MLLG+FA SVQALIFSTLA AYIAEA+E
Sbjct:    7 NSNTFTLLANAEVGKHFYWNIAGFLVHGQVLIVIWFVLLILLVLSFLGTKNADRIPHGWQNFMEAAVDFVTDIARDQLGESFYKEWIPYIGTLFLFIFGCNWAGAVIPWKLIELPEGELAAPTNDINTTVALALLTSFAYFYAGLSKKGLGYFKRYVQPIPLLLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTSLVPLVVPLPIMLLGIFAGSVQALIFSTLAAAYIAEALE 242
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J792_ECTSI6.160e-16997.98ATP synthase subunit a, chloroplastic n=40 Tax=Pha... [more]
A0A8F0F721_9PHAE6.160e-15187.50ATP synthase CF0 A subunit subunit IV n=1 Tax=Prot... [more]
A0A141BSD6_9PHAE2.920e-14985.08ATP synthase subunit a, chloroplastic n=14 Tax=Fuc... [more]
D1GJH7_FUCVE6.690e-14587.14ATP synthase subunit a, chloroplastic n=5 Tax=Fuca... [more]
A0A8E6D5Q8_9PHAE4.420e-14485.08ATP synthase subunit a, chloroplastic n=1 Tax=Ishi... [more]
A0A7S6U9W7_9STRA5.680e-13578.05ATP synthase subunit a, chloroplastic n=1 Tax=Schi... [more]
A0A2I4Q287_9PHAE1.060e-12978.23ATP synthase subunit a, chloroplastic n=1 Tax=Dict... [more]
B7T1S1_VAULI1.120e-12775.81ATP synthase subunit a, chloroplastic n=1 Tax=Vauc... [more]
A0T0N9_THAPS1.430e-12073.39ATP synthase subunit a, chloroplastic n=24 Tax=Bac... [more]
A0A023JER3_9STRA5.820e-12072.46ATP synthase subunit a, chloroplastic n=3 Tax=Baci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10contigL-elsbetiae_contig10:40207..40950 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score476.5
Seed ortholog evalue7.7e-132
Seed eggNOG ortholog2880.D1J792
Preferred nameATP6
KEGG koko:K02108,ko:K02126,ko:K02967
KEGG TC3.A.2.1
KEGG Pathwayko00190,ko00195,ko01100,ko03010,ko04714,ko05010,ko05012,ko05016,map00190,map00195,map01100,map03010,map04714,map05010,map05012,map05016
KEGG ModuleM00157,M00158,M00178,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000276,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0006950,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008324,GO:0008340,GO:0008553,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009544,GO:0009579,GO:0009628,GO:0009987,GO:0010259,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016043,GO:0016310,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031090,GO:0031224,GO:0031226,GO:0031966,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0033177,GO:0034220,GO:0034357,GO:0034641,GO:0034654,GO:0036296,GO:0036442,GO:0040011,GO:0042407,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042651,GO:0042776,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044455,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046716,GO:0046907,GO:0046933,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055035,GO:0055085,GO:0055086,GO:0055093,GO:0060249,GO:0061024,GO:0065007,GO:0065008,GO:0070050,GO:0070482,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098807,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600,GO:1990542
EggNOG free text desc.ATP synthesis coupled proton transport
EggNOG OGsCOG0356@1,KOG4665@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko00194,ko03011,ko03029,ko03110
Exons1
Model size744
Cds size744
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815232.1129544-CDS-L-elsbetiae_contig10:40206..409501622815232.1129544-CDS-L-elsbetiae_contig10:40206..40950Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 40207..40950 +
1691682783.9705966-CDS-L-elsbetiae_contig10:40206..409501691682783.9705966-CDS-L-elsbetiae_contig10:40206..40950Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 40207..40950 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10.19.1prot_L-elsbetiae_contig10.19.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10 40207..40950 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10.19.1

>prot_L-elsbetiae_contig10.19.1 ID=prot_L-elsbetiae_contig10.19.1|Name=mRNA_L-elsbetiae_contig10.19.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=248bp
MNILQSTNTINLNSLTFLSDIEVGKHLYWEVNDITFHGQVIIVSSFVILL
TFLFSFLGTSNKNIVPNGWQNFMESVVEFVKEIAQNQLGKEYRPWLPFIG
TLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYF
YAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADEL
TVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH*
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mRNA from alignment at L-elsbetiae_contig10:40207..40950+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10.19.1 ID=mRNA_L-elsbetiae_contig10.19.1|Name=mRNA_L-elsbetiae_contig10.19.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig10:40207..40950+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAATATTCTTCAAAGCACTAATACTATTAATTTAAATTCATTAACCTT
TTTATCAGATATTGAAGTTGGGAAACATCTTTATTGGGAAGTAAATGATA
TTACTTTTCATGGGCAAGTAATTATTGTGAGTTCTTTTGTAATATTGTTA
ACATTTTTATTTTCGTTTTTAGGTACATCAAATAAAAATATAGTTCCCAA
TGGTTGGCAAAATTTTATGGAATCCGTTGTAGAATTTGTTAAAGAGATTG
CTCAAAACCAACTTGGTAAAGAATATAGACCATGGTTACCATTTATTGGG
ACTTTATTTCTATTTGTTTTTGGTTGTAATTGGGCCGGAGCTATAATACC
TTGGAAATTAATAAAGCTTTCGGAAGGTGAATTTGGAGCCCCAACAAATG
ATATAAATACAACTGTAGCTTTAGCATTATTAACATCATTTATGTATTTC
TATGCTGGTTTAAGTACAAAAGGATTTGGTTATTTTAAACGATATATAGA
ACCTACACCTCTTTTGCTACCAATTAATATTTTAGAAGACTTTACCAAGC
CTCTTTCGCTAAGTTTTCGTTTGTTTGGGAATATCTTAGCTGATGAATTA
ACTGTTTCAGTATTGGCTTTATTAGTTCCTTTAATTGTCCCATTACCAGT
TATGCTATTAGGGGTATTTGCTAGTTCAGTCCAAGCCTTAATTTTTTCTA
CTTTAGCAGGTGCTTATATTGCTGAGGCTGTTGAAGGTCATTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig10:40207..40950+

>mRNA_L-elsbetiae_contig10.19.1 ID=mRNA_L-elsbetiae_contig10.19.1|Name=mRNA_L-elsbetiae_contig10.19.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1488bp|location=Sequence derived from alignment at L-elsbetiae_contig10:40207..40950+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAATATTCTTCAAAGCACTAATACTATTAATTTAAATTCATTAACCTT
TTTATCAGATATTGAAGTTGGGAAACATCTTTATTGGGAAGTAAATGATA
TTACTTTTCATGGGCAAGTAATTATTGTGAGTTCTTTTGTAATATTGTTA
ACATTTTTATTTTCGTTTTTAGGTACATCAAATAAAAATATAGTTCCCAA
TGGTTGGCAAAATTTTATGGAATCCGTTGTAGAATTTGTTAAAGAGATTG
CTCAAAACCAACTTGGTAAAGAATATAGACCATGGTTACCATTTATTGGG
ACTTTATTTCTATTTGTTTTTGGTTGTAATTGGGCCGGAGCTATAATACC
TTGGAAATTAATAAAGCTTTCGGAAGGTGAATTTGGAGCCCCAACAAATG
ATATAAATACAACTGTAGCTTTAGCATTATTAACATCATTTATGTATTTC
TATGCTGGTTTAAGTACAAAAGGATTTGGTTATTTTAAACGATATATAGA
ACCTACACCTCTTTTGCTACCAATTAATATTTTAGAAGACTTTACCAAGC
CTCTTTCGCTAAGTTTTCGTTTGTTTGGGAATATCTTAGCTGATGAATTA
ACTGTTTCAGTATTGGCTTTATTAGTTCCTTTAATTGTCCCATTACCAGT
TATGCTATTAGGGGTATTTGCTAGTTCAGTCCAAGCCTTAATTTTTTCTA
CTTTAGCAGGTGCTTATATTGCTGAGGCTGTTGAAGGTCATTAAATGAAT
ATTCTTCAAAGCACTAATACTATTAATTTAAATTCATTAACCTTTTTATC
AGATATTGAAGTTGGGAAACATCTTTATTGGGAAGTAAATGATATTACTT
TTCATGGGCAAGTAATTATTGTGAGTTCTTTTGTAATATTGTTAACATTT
TTATTTTCGTTTTTAGGTACATCAAATAAAAATATAGTTCCCAATGGTTG
GCAAAATTTTATGGAATCCGTTGTAGAATTTGTTAAAGAGATTGCTCAAA
ACCAACTTGGTAAAGAATATAGACCATGGTTACCATTTATTGGGACTTTA
TTTCTATTTGTTTTTGGTTGTAATTGGGCCGGAGCTATAATACCTTGGAA
ATTAATAAAGCTTTCGGAAGGTGAATTTGGAGCCCCAACAAATGATATAA
ATACAACTGTAGCTTTAGCATTATTAACATCATTTATGTATTTCTATGCT
GGTTTAAGTACAAAAGGATTTGGTTATTTTAAACGATATATAGAACCTAC
ACCTCTTTTGCTACCAATTAATATTTTAGAAGACTTTACCAAGCCTCTTT
CGCTAAGTTTTCGTTTGTTTGGGAATATCTTAGCTGATGAATTAACTGTT
TCAGTATTGGCTTTATTAGTTCCTTTAATTGTCCCATTACCAGTTATGCT
ATTAGGGGTATTTGCTAGTTCAGTCCAAGCCTTAATTTTTTCTACTTTAG
CAGGTGCTTATATTGCTGAGGCTGTTGAAGGTCATTAA
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