mRNA_L-elsbetiae_contig9993.18915.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9993.18915.1 vs. uniprot
Match: D8LN40_ECTSI (60S ribosomal protein L7a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN40_ECTSI) HSP 1 Score: 457 bits (1176), Expect = 8.870e-162 Identity = 242/255 (94.90%), Postives = 249/255 (97.65%), Query Frame = 1 Query: 4 GVAKKQVKKQVKSTPKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSQALDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGKDPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMDIPYCIVKGKARLGTLVHQKNAAVICLTNVNKEDESKLSTLKSNFNAQFNEGFQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 768 GVAKKQVKKQVKSTPKKVADPLFPA+KKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFS+A+DKNQATELLKVLMKYQPEDKKAKQQRL+EIAAAKEAGK+PAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDV PIELVVWLPALCRKM IPYCI+KGKARLGTLVHQKNAAVICLT VNKEDESKLS LKSNF AQFNEGF RKWGGG+MGLKTQRKLEKRQKAIEAELAKKAQY Sbjct: 2 GVAKKQVKKQVKSTPKKVADPLFPARKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSKAIDKNQATELLKVLMKYQPEDKKAKQQRLKEIAAAKEAGKEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVTPIELVVWLPALCRKMGIPYCIMKGKARLGTLVHQKNAAVICLTTVNKEDESKLSNLKSNFTAQFNEGFVRKWGGGVMGLKTQRKLEKRQKAIEAELAKKAQY 256
BLAST of mRNA_L-elsbetiae_contig9993.18915.1 vs. uniprot
Match: A0A6V1R9A7_HETAK (60S ribosomal protein L7a n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9A7_HETAK) HSP 1 Score: 321 bits (822), Expect = 6.680e-108 Identity = 174/242 (71.90%), Postives = 205/242 (84.71%), Query Frame = 1 Query: 55 VADPLFPAKKKSFRIGRDIQPKV-DLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSQALDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEA-GKDPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMDIPYCIVKGKARLGTLVHQKNAAVICLTNVNKEDESKLSTLKSNFNAQFNEGFQRKWGGGIMGLKTQRKLEKRQKAIEAELAKK--AQY 768 V DPLF AK +SFR+G DI+PK DLSR+VKWPR +R+QRQRKIL+QRLKVPP+I QFSQ L+KNQATEL K+L+KYQPE KKAKQQRL+E+AAA G+ P P+ +K+GLKHVTTLIE+++A LV IAHDVNP+ELVVWLPALCRKM +P+C+VK KARLGTL H+KNAAV+ LT VNKED++KL TL +NF AQFN+ RKWGGGIMGLKTQRKLEKRQKA+EAELAKK AQY Sbjct: 19 VKDPLFQAKPRSFRVGGDIRPKKRDLSRYVKWPRNVRIQRQRKILLQRLKVPPAIQQFSQPLEKNQATELFKLLVKYQPETKKAKQQRLKEMAAAGATKGEKPGPT-----LKYGLKHVTTLIEQKEAKLVCIAHDVNPLELVVWLPALCRKMGVPFCVVKDKARLGTLCHKKNAAVVALTEVNKEDKAKLDTLGANFTAQFNDTPVRKWGGGIMGLKTQRKLEKRQKALEAELAKKTSAQY 255
BLAST of mRNA_L-elsbetiae_contig9993.18915.1 vs. uniprot
Match: F0Y2N8_AURAN (60S ribosomal protein L7a (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2N8_AURAN) HSP 1 Score: 311 bits (797), Expect = 4.070e-104 Identity = 170/255 (66.67%), Postives = 200/255 (78.43%), Query Frame = 1 Query: 10 AKKQVKKQVKSTPKKVA---DPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSQALDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGKDPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMDIPYCIVKGKARLGTLVHQKNAAVICLTNVNKEDESKLSTLKSNFNAQFNEGFQ--RKWGGGIMGLKTQRKLEKRQKAIEAELAKK 759 +KK+VK K+ PKK A DPLF A ++FR+G DIQP DLSRFVKWPRY+RLQRQ+KIL QRLKVPP++NQF+ LDKNQA EL K+LMKYQPEDK AK R++ +A AK AG KAP V+KFGLKHVT L+E +KA LV IA DV+PIELVVWLPALC+KMD+PYCIVK K+RLGT+VHQK AAV CLT V KED+ L L+SNF A +N+ RKWGGGIMGLKTQ KL KR+KA++AELAKK Sbjct: 3 SKKEVK---KAPPKKEAAKPDPLFQATPRNFRVGGDIQPTRDLSRFVKWPRYVRLQRQKKILQQRLKVPPALNQFATTLDKNQAAELFKLLMKYQPEDKAAKADRVKALAEAKAAGGAAPEGKAPTVVKFGLKHVTYLVENKKAKLVCIASDVDPIELVVWLPALCKKMDVPYCIVKNKSRLGTVVHQKTAAVCCLTTVKKEDQHSLDQLRSNFKAMYNDNVAHARKWGGGIMGLKTQAKLAKREKALQAELAKK 254
BLAST of mRNA_L-elsbetiae_contig9993.18915.1 vs. uniprot
Match: A0A3R7JAR0_9STRA (60S ribosomal protein L7a n=8 Tax=Peronosporaceae TaxID=4777 RepID=A0A3R7JAR0_9STRA) HSP 1 Score: 311 bits (796), Expect = 8.400e-104 Identity = 170/245 (69.39%), Postives = 197/245 (80.41%), Query Frame = 1 Query: 40 STPKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSQALDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGKDPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMDIPYCIVKGKARLGTLVHQKNAAVICLTNVNKEDESKLSTLKSNFNAQFNEG--FQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 768 S PKK DPLF + K+FR G DIQPK DLSRFV+WPRY+RLQRQRKIL QRLKVPPS+NQFS LDKN AT+L K+L+KYQPE K AK RLR IAA KE P P V+KFGL HVT+L+E +KA LVVIAHDV+PIELVV+LPALCR+ DIPYCIVKGK+RLG LVHQKNAAV+ LT+VNKED++K +L F+A+FNE +RKWGGGIMGLKTQ+KLE R+KA+ AE AKKAQY Sbjct: 28 SKPKK--DPLFQSTPKNFRRGGDIQPKRDLSRFVRWPRYVRLQRQRKILYQRLKVPPSVNQFSNTLDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKEEASAP-----PAVVKFGLNHVTSLVENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKSRLGQLVHQKNAAVVALTHVNKEDKAKFDSLSEAFHAKFNEDSTIRRKWGGGIMGLKTQKKLELREKAVAAEAAKKAQY 265
BLAST of mRNA_L-elsbetiae_contig9993.18915.1 vs. uniprot
Match: T0QDT5_SAPDV (60S ribosomal protein L7a n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0QDT5_SAPDV) HSP 1 Score: 311 bits (796), Expect = 8.690e-104 Identity = 169/242 (69.83%), Postives = 195/242 (80.58%), Query Frame = 1 Query: 49 KKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSQALDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGKDPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMDIPYCIVKGKARLGTLVHQKNAAVICLTNVNKEDESKLSTLKSNFNAQFNEG--FQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 768 KK ADPLFP+ K+FR+G DIQPK DLSRFV+WP+ +RLQRQ KIL RLKVPPSINQF+ LDKN AT+L K+L+KYQPE K AK QRLR+IAA KE P P VIK+GL HVT+LIE +KA +V IAHDV PIELVV+LPALCRKMDIPYCIVKGKARLG LVH+KNAAV+ LT VNKED++K +L + F AQFN+ +RKWGGGIMGLKTQ+KLE R KA+ AELAKKAQY Sbjct: 30 KKGADPLFPSAPKNFRLGGDIQPKRDLSRFVRWPKNVRLQRQHKILTTRLKVPPSINQFTNTLDKNAATDLYKLLLKYQPESKAAKTQRLRDIAAGKEQVSAP-----PAVIKYGLNHVTSLIENKKAKMVCIAHDVTPIELVVFLPALCRKMDIPYCIVKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLNTAFRAQFNDESTHRRKWGGGIMGLKTQKKLELRAKAVAAELAKKAQY 266
BLAST of mRNA_L-elsbetiae_contig9993.18915.1 vs. uniprot
Match: A0A0P1B814_PLAHL (60S ribosomal protein L7a n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1B814_PLAHL) HSP 1 Score: 310 bits (795), Expect = 1.150e-103 Identity = 173/247 (70.04%), Postives = 197/247 (79.76%), Query Frame = 1 Query: 34 VKSTPKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSQALDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGKDPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMDIPYCIVKGKARLGTLVHQKNAAVICLTNVNKEDESKLSTLKSNFNAQFNE--GFQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 768 V ST KK +PLF + K+FR G DIQPK DLSRFV+WPRY+RLQRQRKIL QRLKVPPSINQFS +DKN AT+L K+L+KYQPE K AK RLR IAA K+ P P V+KFGL HVT+LIE +KA LVVIAHDVNPIELVV+LPALCR+ DIPYCIVKGKARLG LVHQKNAAV+ LT+VNKED++K +L F A+FNE +RKWGGGIMGLKTQ+KLE R+KAI AE AKKAQY Sbjct: 25 VSSTSKK--NPLFASTPKNFRKGNDIQPKRDLSRFVRWPRYVRLQRQRKILYQRLKVPPSINQFSNTVDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKQEATAP-----PAVVKFGLNHVTSLIENKKAKLVVIAHDVNPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLSQVFRAKFNEDSATRRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 264
BLAST of mRNA_L-elsbetiae_contig9993.18915.1 vs. uniprot
Match: A0A7S3HBR5_9STRA (60S ribosomal protein L7a n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBR5_9STRA) HSP 1 Score: 305 bits (782), Expect = 8.870e-102 Identity = 159/237 (67.09%), Postives = 193/237 (81.43%), Query Frame = 1 Query: 58 ADPLFPAKKKSFRIGRDIQPK-VDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSQALDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGKDPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMDIPYCIVKGKARLGTLVHQKNAAVICLTNVNKEDESKLSTLKSNFNAQFNEGFQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQ 765 A+PLFP+ KSFRIG D++ K DLSR+V+WPRY+R+QRQ+KIL+QRLKVPPSINQF + LDKNQA+EL K+L+KYQPE K AK RL +A A A + P +KFGLKHVTTLIE++KA LVVI HDV+PIELV+WLPALCRKM++P+ IVKGK+RLGTL H+K +V+CLT+VNKEDESKL TL NF AQFN+ +RKWGGGIMGLKTQ KL+KR KA+E E AKKA+ Sbjct: 19 ANPLFPSTPKSFRIGGDLRLKGKDLSRYVRWPRYVRIQRQKKILLQRLKVPPSINQFQRTLDKNQASELFKLLVKYQPETKAAKTTRLEALAQATAAKESTPSGPPPATLKFGLKHVTTLIEQKKAKLVVIPHDVDPIELVLWLPALCRKMNVPFAIVKGKSRLGTLTHKKTCSVVCLTSVNKEDESKLKTLGENFKAQFNDNVERKWGGGIMGLKTQAKLDKRAKALEVEEAKKAE 255
BLAST of mRNA_L-elsbetiae_contig9993.18915.1 vs. uniprot
Match: K3WB90_GLOUD (60S ribosomal protein L7a n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WB90_GLOUD) HSP 1 Score: 305 bits (782), Expect = 1.290e-101 Identity = 169/243 (69.55%), Postives = 194/243 (79.84%), Query Frame = 1 Query: 46 PKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSQALDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGKDPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMDIPYCIVKGKARLGTLVHQKNAAVICLTNVNKEDESKLSTLKSNFNAQFNEGF--QRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 768 PKK DPLF + K+FR+G DIQPK DLSRFV+WPRY+R+QRQRKIL QRLKVPPSINQF+ +DKN A +L K+L+KYQPE K AK RLR IAA KE P P VIK+GL HVT+LIE +KA LVVIAHDVNPIELVV+LPALCRK DIPY IVKGKARLG LVH+KNAAV+ LT+VNKED+SK +L S F +FN+ +RKWGGGIMGLKTQ+KLE R+KAI AE AKKAQY Sbjct: 34 PKK--DPLFQSAPKNFRLGGDIQPKRDLSRFVRWPRYVRIQRQRKILYQRLKVPPSINQFTNTIDKNTAADLFKLLLKYQPETKAAKTLRLRNIAAGKEEASAP-----PAVIKYGLNHVTSLIENKKAKLVVIAHDVNPIELVVFLPALCRKFDIPYTIVKGKARLGQLVHKKNAAVVALTHVNKEDKSKFDSLASAFKTKFNDDSTTRRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 269
BLAST of mRNA_L-elsbetiae_contig9993.18915.1 vs. uniprot
Match: A0A6G0X5U8_9STRA (60S ribosomal protein L7a n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A6G0X5U8_9STRA) HSP 1 Score: 303 bits (776), Expect = 1.020e-100 Identity = 163/242 (67.36%), Postives = 194/242 (80.17%), Query Frame = 1 Query: 49 KKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSQALDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGKDPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMDIPYCIVKGKARLGTLVHQKNAAVICLTNVNKEDESKLSTLKSNFNAQFNEG--FQRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 768 KK ADPLFP+ ++FR+G +IQPK DLSRFV+WP+ +RLQRQ KIL RLKVPPS+NQF+ LDKN A +LLK+L+KYQPE K AKQQRL++IAA KE P P VIK+GL HVT+LIE +KA LVVIAHDV P+ELVV+LPALCRKMDIPY I KGKARLG LVH+KNAAV+ LT VNKED++K +L + F QFN+ +RKWGGGIMGLKTQ+KLE R+KA+ AE AKKAQY Sbjct: 32 KKAADPLFPSTPRNFRLGGNIQPKRDLSRFVRWPKNVRLQRQAKILQTRLKVPPSVNQFTNTLDKNHAVDLLKLLLKYQPETKAAKQQRLKDIAAGKEQAAAP-----PAVIKYGLNHVTSLIENKKAKLVVIAHDVTPLELVVFLPALCRKMDIPYAIFKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLATAFRGQFNDETTHRRKWGGGIMGLKTQKKLELREKAVAAEAAKKAQY 268
BLAST of mRNA_L-elsbetiae_contig9993.18915.1 vs. uniprot
Match: M4B6Z0_HYAAE (60S ribosomal protein L7a n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B6Z0_HYAAE) HSP 1 Score: 302 bits (774), Expect = 1.790e-100 Identity = 164/238 (68.91%), Postives = 192/238 (80.67%), Query Frame = 1 Query: 61 DPLFPAKKKSFRIGRDIQPKVDLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSQALDKNQATELLKVLMKYQPEDKKAKQQRLREIAAAKEAGKDPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVNPIELVVWLPALCRKMDIPYCIVKGKARLGTLVHQKNAAVICLTNVNKEDESKLSTLKSNFNAQFNEGF--QRKWGGGIMGLKTQRKLEKRQKAIEAELAKKAQY 768 +PLF ++ K+FR G DIQPK DLSRFV+WPRY+R+QRQRKIL QRLKVPPSINQFS ALDKN AT+L K+L+KYQPE K AK RLR IAA KE P P V+KFGL HVTTLIE ++A LVVIAHDV+PIELVV+LPALCR+ DIPYCI+KGKARLG LVHQKNAA + LT+VNKED++K +L A++N+ +RKWGGGIMGLKTQ+KLE R+KAI AE AKKAQY Sbjct: 32 NPLFVSRPKNFRRGGDIQPKRDLSRFVRWPRYVRIQRQRKILYQRLKVPPSINQFSYALDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKEEASAP-----PSVVKFGLNHVTTLIETKRAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIIKGKARLGQLVHQKNAAAVALTHVNKEDKAKFDSLAGVVRAKYNDDSTSRRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 264 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9993.18915.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9993.18915.1 >prot_L-elsbetiae_contig9993.18915.1 ID=prot_L-elsbetiae_contig9993.18915.1|Name=mRNA_L-elsbetiae_contig9993.18915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=257bp QGVAKKQVKKQVKSTPKKVADPLFPAKKKSFRIGRDIQPKVDLSRFVKWPback to top mRNA from alignment at L-elsbetiae_contig9993:1753..4953- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9993.18915.1 ID=mRNA_L-elsbetiae_contig9993.18915.1|Name=mRNA_L-elsbetiae_contig9993.18915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3201bp|location=Sequence derived from alignment at L-elsbetiae_contig9993:1753..4953- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9993:1753..4953- >mRNA_L-elsbetiae_contig9993.18915.1 ID=mRNA_L-elsbetiae_contig9993.18915.1|Name=mRNA_L-elsbetiae_contig9993.18915.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1542bp|location=Sequence derived from alignment at L-elsbetiae_contig9993:1753..4953- (Laminarionema elsbetiae ELsaHSoW15)back to top |