mRNA_L-elsbetiae_contig9958.18887.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9958.18887.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI) HSP 1 Score: 144 bits (364), Expect = 1.250e-37 Identity = 74/134 (55.22%), Postives = 94/134 (70.15%), Query Frame = 3 Query: 3 GACVVGTANGMGSGGTPISSTYTGYIHDKCPECKWGDLDFSASGDGRWEIEWEFVPCPVDGISFSFEGSHDWYWKIQPH-SSTPVVDLTINGVPAARSDDNFF-ILEQYIGFTAA--VVTTTVGGVTRTNEVTV 392 GACV GTA+G GSG PI ST+ +I DKCPEC+ GDLDFS SGDGRW+IEW+FV CP + SF ++ +YWK+QP ++TPVV LT++G A R+ DN F + ++ A VVTTTV GVT T EV+V Sbjct: 153 GACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVSV 286
BLAST of mRNA_L-elsbetiae_contig9958.18887.1 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR) HSP 1 Score: 132 bits (333), Expect = 4.230e-33 Identity = 54/111 (48.65%), Postives = 77/111 (69.37%), Query Frame = 3 Query: 3 GACVVGTANGMGSGGTPISSTYTGYIHDKCPECKWGDLDFSASGDGRWEIEWEFVPCPVDGISFSFEGSHDWYWKIQPHS-STPVVDLTINGVPAARSDDNFFILEQYIGF 332 GAC++ T G GSG P+ T+ Y+HD+CPECK+GD+D S SGDGRW+++W F+PCP + + F FEGS+ +Y K+QP TPV ++NG ++ DNF+IL+ GF Sbjct: 69 GACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPGEWVFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGF 179
BLAST of mRNA_L-elsbetiae_contig9958.18887.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI) HSP 1 Score: 125 bits (314), Expect = 5.400e-31 Identity = 58/107 (54.21%), Postives = 72/107 (67.29%), Query Frame = 3 Query: 3 GACVVGTANGMGSGGTPISSTYTGYIHDKCPECKWGDLDFSASGDGRWEIEWEFVPCPVDGI-SFSFEGSHDWYWKIQPHSS-TPVVDLTINGVPAARSDDNFFILE 317 GAC+ G G G G P+ + Y+ D+CPEC +GDLDF+A GDGRW+I W FVPC +F FEGS+++YWKIQP +PV L ING A RS+DNFFILE Sbjct: 88 GACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILE 194
BLAST of mRNA_L-elsbetiae_contig9958.18887.1 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR) HSP 1 Score: 126 bits (317), Expect = 9.560e-31 Identity = 53/111 (47.75%), Postives = 74/111 (66.67%), Query Frame = 3 Query: 3 GACVVGTANGMGSGGTPISSTYTGYIHDKCPECKWGDLDFSASGDGRWEIEWEFVPCPVDGISFSFEGSHDWYWKIQPHS-STPVVDLTINGVPAARSDDNFFILEQYIGF 332 GAC+ T G GSG PI T+ Y+HD+CPECK+GD+D S GDGRW + W+F+PCP + + F FEGS+ +Y K+QP TPV L++ G ++ DNF+I++ GF Sbjct: 74 GACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPGEFVFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIVQNGGGF 184
BLAST of mRNA_L-elsbetiae_contig9958.18887.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE) HSP 1 Score: 128 bits (322), Expect = 8.080e-30 Identity = 70/135 (51.85%), Postives = 82/135 (60.74%), Query Frame = 3 Query: 3 GACVVGTANGMGSGGTPISSTYTGYIHDKCPECKWGDLDFSASGDGRWEIEWEFVPCPVDGISFSFEGSHDWYWKIQPH-SSTPVVDLTINGVPAARSDDNFFILEQYIGFT----AAVVTTTVGGVTRTNEVTV 392 G+CV G G G G PI T+ G+I DKCPEC GDLDF DGRW+IEW FV CP + +SF +YWKIQP ++TPV LTI G AAR+DDN F LE G VVTTTVGGV E++V Sbjct: 397 GSCVEGEGTGGGGGDNPIG-TFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEMSV 530
BLAST of mRNA_L-elsbetiae_contig9958.18887.1 vs. uniprot
Match: A0A2P6NBD6_9EUKA (Endochitinase-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBD6_9EUKA) HSP 1 Score: 95.5 bits (236), Expect = 4.730e-18 Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = 3 Query: 3 GACVVGTANGMGSGGTPISSTYTGYIHDKCPECKWGDLDFSASGDGRWEIEWEFVPCPV--DGISFSFEGSHDWYWKIQPHSS-TPVVDLTINGVPAA------RSDDNFFIL 314 G+C+ T +G G+G P+ +T +++D+CP C G LDF+ +GDG W+I W+ V CPV GI ++F+GS++WY K+Q + TP+ ++I R+ DNFF L Sbjct: 384 GSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFEL 496
BLAST of mRNA_L-elsbetiae_contig9958.18887.1 vs. uniprot
Match: A0A2P6NBF0_9EUKA (MAP/microtubule affinity-regulating kinase 3-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NBF0_9EUKA) HSP 1 Score: 95.5 bits (236), Expect = 5.070e-18 Identity = 44/113 (38.94%), Postives = 69/113 (61.06%), Query Frame = 3 Query: 3 GACVVGTANGMGSGGTPISSTYTGYIHDKCPECKWGDLDFSASGDGRWEIEWEFVPCPV--DGISFSFEGSHDWYWKIQPHSS-TPVVDLTINGVPAA------RSDDNFFIL 314 G+C+ T +G G+G P+ +T +++D+CP C G LDF+ +GDG W+I W+ V CPV GI ++F+GS++WY K+Q + TP+ ++I R+ DNFF L Sbjct: 777 GSCIQITGSGKGAGSNPVKGNFTAFVNDQCPTCVPGGLDFAKNGDGLWDISWKVVDCPVGNSGIYYAFQGSNEWYMKVQARNHRTPLNFISIQDPNTKQYRKMKRTGDNFFEL 889
BLAST of mRNA_L-elsbetiae_contig9958.18887.1 vs. uniprot
Match: K1QR45_CRAGI (Expansin-yoaJ n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1QR45_CRAGI) HSP 1 Score: 82.4 bits (202), Expect = 1.010e-14 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 3 Query: 30 GMGSGGTPISSTYTGYIHDKCPECKWGDLDFSASGDGRWEIEWEFVPCPVDG--ISFSFEGSHDWYWKIQ 233 G G+G PI+ T+T ++ D CPEC G LD + +GDGRW+IE + + CPV I + F+GS++WY K+Q Sbjct: 85 GQGAGNDPITGTFTAFVKDLCPECHAGALDLAENGDGRWKIEIQAIQCPVGNGKIEYKFQGSNNWYLKLQ 154
BLAST of mRNA_L-elsbetiae_contig9958.18887.1 vs. uniprot
Match: A0A6B2LH25_9EUKA (Uncharacterized protein (Fragment) n=2 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LH25_9EUKA) HSP 1 Score: 78.6 bits (192), Expect = 1.340e-13 Identity = 44/117 (37.61%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 3 GACVVGTANGMGSGGT--PISSTYTGYIHDKCPECKWGDLDFSASGDGRWEIEWEFVPCPVDG-ISFSFE-GSHDWYWKIQPHS---STPVVDLTING--VPAARSDDNFFILEQYI 326 G C+ G GSG + P + YI+++CPEC ++D + + DGRW+IEWE VPCP+ G IS + GS ++Y I P V+L + G V A R N+FI Q + Sbjct: 27 GTCIKIYPLGTGSGNSDFPTRPPFVAYINNQCPECGSANVDLAQTSDGRWDIEWEVVPCPISGKISLQLKTGSSEYYTAIAPRDFIVGVQSVELLVGGSWVSADRQSYNYFIYSQRV 143
BLAST of mRNA_L-elsbetiae_contig9958.18887.1 vs. uniprot
Match: A0A6B2LD32_9EUKA (Uncharacterized protein n=2 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LD32_9EUKA) HSP 1 Score: 78.6 bits (192), Expect = 3.410e-13 Identity = 44/117 (37.61%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 3 GACVVGTANGMGSGGT--PISSTYTGYIHDKCPECKWGDLDFSASGDGRWEIEWEFVPCPVDG-ISFSFE-GSHDWYWKIQPHS---STPVVDLTING--VPAARSDDNFFILEQYI 326 G C+ G GSG + P + YI+++CPEC ++D + + DGRW+IEWE VPCP+ G IS + GS ++Y I P V+L + G V A R N+FI Q + Sbjct: 27 GTCIKIYPLGTGSGNSDFPTRPPFVAYINNQCPECGSANVDLAQTSDGRWDIEWEVVPCPISGKISLQLKTGSSEYYTAIAPRDFIVGVQSVELLVGGSWVSADRQSYNYFIYSQRV 143 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9958.18887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9958.18887.1 >prot_L-elsbetiae_contig9958.18887.1 ID=prot_L-elsbetiae_contig9958.18887.1|Name=mRNA_L-elsbetiae_contig9958.18887.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=122bp MGSGGTPISSTYTGYIHDKCPECKWGDLDFSASGDGRWEIEWEFVPCPVDback to top mRNA from alignment at L-elsbetiae_contig9958:3084..4435- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9958.18887.1 ID=mRNA_L-elsbetiae_contig9958.18887.1|Name=mRNA_L-elsbetiae_contig9958.18887.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1352bp|location=Sequence derived from alignment at L-elsbetiae_contig9958:3084..4435- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9958:3084..4435- >mRNA_L-elsbetiae_contig9958.18887.1 ID=mRNA_L-elsbetiae_contig9958.18887.1|Name=mRNA_L-elsbetiae_contig9958.18887.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=732bp|location=Sequence derived from alignment at L-elsbetiae_contig9958:3084..4435- (Laminarionema elsbetiae ELsaHSoW15)back to top |