mRNA_L-elsbetiae_contig995.18880.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig995.18880.1
Unique NamemRNA_L-elsbetiae_contig995.18880.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig995.18880.1 vs. uniprot
Match: A0A6H5JDN4_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN4_9PHAE)

HSP 1 Score: 506 bits (1302), Expect = 2.150e-164
Identity = 278/429 (64.80%), Postives = 305/429 (71.10%), Query Frame = 1 
Query:    1 GSVTKVNEYIIVRDIGEGSSAEVKLCRLVIPSRPPPSPGEHCDSPQSE------------------------------------RHHASAF--------EACGDGRGREEEDGEGFYNDLYVRESKKWCGSKGKCS-------AVKIFDRTELMRRGARFARPRARGPDGALLPLAAASDNYIKVQREIAIMKKLVHPNIVQLVEVIDAPRDRSLYMVMEYAERGAVMRCVEPGMGRYECP--VN-GGCLDAPLAAGYFADILAGLEYLHLHLIAHRDLKPENVLIGDDGRAKIADFGVSQYFTDDEPRTPKSARSLARSNSRAQMSTTEGTWCFWAPEMCGTRKEGAAFNAYAADSWAAGVTLWCFLYGKVPFFSLSPMDLFASIAVDPTPIPPGANTALRDLLERLLAKDPRERLTVPEAREHIWVR 1125
            GSVTKVNEY++VRD+G GSSAEVKLCRL++P      P    D+  +                                     RH ASA         +  G   GR++E       DLYV    + C              AVKIFDR ELMRRGARFARPRARGPDGALLP  A SDNYIKVQREIAIMKKLVHPN+VQLVEVIDAPRDRSLYMVMEY ERGAVM CVE GMGRYEC   VN G CLDA  AA YF+D+LAGLEYLHL LIAHRDLKPENVLIG+D RAKIADFGVSQYF DDEPRTPKSARSLARS SRAQMS+TEGTWCFW+PEMCG   EGAAFNAYA+D+WAAGVTLWC LYG VPFFSL+PMDLF SIA DP P+P GA+T L+DLL RLL KDP +RLTVPEAR+H W++
Sbjct:  104 GSVTKVNEYVVVRDLGRGSSAEVKLCRLLMP------PDRVFDNQHTSDIGLSANRESIVDTVGGGXXXESRSGSSGFGGEGRRRHRASAGTYKERVEGQEGGQDHGRDQERDGLDGGDLYVCSGGEACVGVENVDVRDTPLVAVKIFDRAELMRRGARFARPRARGPDGALLPAKATSDNYIKVQREIAIMKKLVHPNVVQLVEVIDAPRDRSLYMVMEYVERGAVMYCVEQGMGRYECSPSVNEGSCLDARTAARYFSDVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFNDDEPRTPKSARSLARSTSRAQMSSTEGTWCFWSPEMCGEWGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADTPLKDLLNRLLTKDPGKRLTVPEARDHRWLQ 526
[Close]
BLAST of mRNA_L-elsbetiae_contig995.18880.1 vs. uniprot
Match: D8LKE4_ECTSI (Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKE4_ECTSI)

HSP 1 Score: 498 bits (1282), Expect = 8.460e-163
Identity = 271/409 (66.26%), Postives = 298/409 (72.86%), Query Frame = 1 
Query:    1 GSVTKVNEYIIVRDIGEGSSAEVKLCRLVIPSRPPPSPGEHCDSPQSERHHASAFE-------------------------------ACGDGRGREEEDGEGFYNDLYVRESKKWCGSKGKCSAVKIFDRTELMRRGARFARPRARGPDGALLPLAAASDNYIKVQREIAIMKKLVHPNIVQLVEVIDAPRDRSLYMVMEYAERGAVMRCVEPGMGRYECPVN---GGCLDAPLAAGYFADILAGLEYLHLHLIAHRDLKPENVLIGDDGRAKIADFGVSQYFTDDEPRTPKSARSLARSNSRAQMSTTEGTWCFWAPEMCGTRKEGAAFNAYAADSWAAGVTLWCFLYGKVPFFSLSPMDLFASIAVDPTPIPPGANTALRDLLERLLAKDPRERLTVPEAREHIWVR 1125
            GSV KVNEY++VRD+G GSSAEVKLCRL++P      P    D+  +  +  SA                                 A GD      E  EG  +    +E  +  G  G   AVKIFDR ELMRRGARFARPRARGPDGALLP  A  +NYIKVQREIAIMKKLVHPN+VQLVEVIDAPRDRSLYMVMEY ERGAVM CVE  MGRYEC  +   GGCLDA  AA YFAD+LAGLEYLHL LIAHRDLKPENVLIG+D RAKIADFGVSQYF DDEPRT KSARSLARS SRAQMS+TEGTWCFW+PEMCG R EGAAFNAYA+D+WAAGVTLWC LYG VPFFSL+PMDLF SIA DP P+P GA+  L+DLL RLL KDP +RLTVPEAR+H WV+
Sbjct:   57 GSVAKVNEYVVVRDLGRGSSAEVKLCRLLMP------PDRVIDNRHTNDNGLSATRESIADTVGGGXXXXXXXXXXXXXXXXXXXXXARGDTYKERVERQEGGQDHGRDQERDELDG--GDLYAVKIFDRAELMRRGARFARPRARGPDGALLPAKATPENYIKVQREIAIMKKLVHPNVVQLVEVIDAPRDRSLYMVMEYVERGAVMCCVEQEMGRYECSPSVSEGGCLDARTAARYFADVLAGLEYLHLQLIAHRDLKPENVLIGNDDRAKIADFGVSQYFHDDEPRTLKSARSLARSTSRAQMSSTEGTWCFWSPEMCGERGEGAAFNAYASDAWAAGVTLWCLLYGTVPFFSLNPMDLFTSIAQDPAPVPDGADMTLKDLLNRLLTKDPGKRLTVPEARDHCWVQ 457
[Close]
BLAST of mRNA_L-elsbetiae_contig995.18880.1 vs. uniprot
Match: A0A4D9D4E9_9STRA (Protein kinase domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4E9_9STRA)

HSP 1 Score: 234 bits (598), Expect = 5.480e-63
Identity = 167/439 (38.04%), Postives = 231/439 (52.62%), Query Frame = 1 
Query:    1 GSVTKVNEYIIVRDIGEGSSAEVKLCRLVIPSRPPPS-------PGEH------CDSPQSERHHASAFEACGDGRGREEEDGEGFYNDLYVRESKKWCGSKGKCSAVKIFDRTELMRRGARFARPRARGPDGALLPLAAASDNYIKVQREIAIMKKLVHPNIVQLVEVIDAPRDRSLYMVMEYAERGAVMRCVEPGMGRYECPVNG---GCLDAPLAAGYFADILAGLEYLHLHLIAHRDLKPENVLIGDDGRAKIADFGVSQYFT---------DDEPRTPKSARSLA-------------------RSNSRAQMSTTEGTWCFWAPEMCGTRKEGAAFNAYAADSWAAGVTLWCFLYGKVPFFSLSPMDLFASIAVDPTPIP---PGANTALRDLLERLLAKDPRERLTVPEAREHIWVRSWLERGCRQSGTTSGGG 1176
            G +  VN+Y I++++G G+ AEVKLC+   PS P P+        GE+        SP++ R  AS     G     EE      Y    +   ++         A+K+F ++ L+RR   F R R    +G +    + + +  KVQREIAIMKKL+HP++V L EVID     +LY+V+EY   G +M   +    RY C  +    G L+   AA   +D+LAGL YLH+H IAHRDLKPENVL+G  GR KIADFGV+ YF          DD+     S   LA                   RS+SR  +  ++GTW FWAPEMC   ++GA F+ Y+ D WAAGV LW F++GK+PF   SP  LF +I       P      ++ ++DLL+  L K PRER+TV +A +H WV+   E    + GT +G G
Sbjct:   16 GGLMNVNQYAIIKELGRGAFAEVKLCKRQYPSIPDPTFQSMATGSGEYHSLVSGTGSPKARREEASPSPPRGVSPTSEESRS---YTPSPIPMDEEADKDAKDLYAIKVFSKSLLLRRK-NFGRNR----EGRM----SLTTDLDKVQREIAIMKKLIHPHLVSLYEVIDDASQDALYLVLEYVPGGPIMD-FDAEERRYVCTRSSDGMGVLNEVHAARVLSDMLAGLVYLHVHHIAHRDLKPENVLVGRGGRCKIADFGVAHYFEEEAARILALDDQAGAGASREGLATGTTSPSVSSHEHQLHYLYRSSSRGLLHKSDGTWSFWAPEMC---EQGATFSGYSCDVWAAGVCLWAFMFGKLPFQEDSPEVLFEAIRDKELDFPLEERQVSSEVQDLLQSFLQKLPRERITVGQALDHPWVQLADEE--EEHGTRAGKG 436
[Close]
BLAST of mRNA_L-elsbetiae_contig995.18880.1 vs. uniprot
Match: A0A7S3Y6M6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6M6_HETAK)

HSP 1 Score: 222 bits (566), Expect = 9.920e-62
Identity = 118/243 (48.56%), Postives = 154/243 (63.37%), Query Frame = 1 
Query:  397 KVQREIAIMKKLVHPNIVQLVEVIDAPRDRSLYMVMEYAERGAVMRCVEPGMGRYECPVNGGCLDAPLAAGYFADILAGLEYLHLHLIAHRDLKPENVLIGDDGRAKIADFGVSQYFTDDEPRTPKSARSLARSNSRAQMSTTEGTWCFWAPEMCGTRKEGAAFNAYAADSWAAGVTLWCFLYGKVPFFSLSPMDLFASIAVDPTPIPPGANTA--LRDLLERLLAKDPRERLTVPEAREHIW 1119
            KVQ+EIAIMKKL HPN+VQ+ EVID P    L+MV+EY   G VM   E     Y     GG      AAG+  DI AG++YLH + I HRDLKPEN+L+    R KIADFGVS YF  DE ++P+  R L RS SR Q+  TEGTW FWAPEMC  +     ++ YAAD W+ GV LW  L+GK+PF + +P +LFA+IA  P  +P   + +  ++++L+ LL KDPRER+ + +     W
Sbjct:    9 KVQQEIAIMKKLCHPNLVQMFEVIDDPDGDQLFMVLEYVPNGIVMEWDETADAFYS-RFTGGVYTEEQAAGHMMDICAGMQYLHQNHICHRDLKPENILLSSQNRCKIADFGVSHYFEQDEQKSPR--RDLYRSESRGQLKNTEGTWSFWAPEMC--QPGHGNYSGYAADMWSMGVVLWVMLFGKLPFSAETPPELFAAIAAAPHEVPADKHPSEEVKEVLDGLLKKDPRERIGLGDLSNSRW 246
[Close]
BLAST of mRNA_L-elsbetiae_contig995.18880.1 vs. uniprot
Match: A0A7S4E3P3_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3P3_9STRA)

HSP 1 Score: 218 bits (556), Expect = 3.070e-60
Identity = 132/312 (42.31%), Postives = 189/312 (60.58%), Query Frame = 1 
Query:  205 GEGFYNDLYVRES---KKWCGSKGKCSAVKIFDRTELMRRGARFARPRARGPDGALLPLAAASDNYIKVQREIAIMKKLVHPNIVQLVEVIDAPRDRSLYMVMEYAERGAVMRCVEPGMGRYECPVNGGCLDAPLAAGYFADILAGLEYLHLHLIAHRDLKPENVLIGDDGRAKIADFGVSQYFTDDEPRTPK-SARSLARSNSRAQMSTTEGTWCFWAPEMCGTRKEGAAFNAYAADSWAAGVTLWCFLYGKVPFFSLSPMDLFASIAVDPTPIPPGANTALRDLLERLLAKDPRERLTVPEAREHIWVRS 1128
            G+G + ++++ +S   + +C       A K+FD++ L R+     R  +R  +G  +          KV +EI IMKKLVHPN+V+L+EVID  +D  L+++ME+ E G VM+  +    ++   V GG  +  LA  Y  DI +GL YLHLH IAHRDLKP+NVL+G  GR KIADFGV+ YF +D       S RSL RS+SRAQ+  T+GT+CFWAPEM    K+   FNAY+ D WAAGV  + F+ GK+PF++ SP+++F  IA     IP   +   R ++  LLA +   RLTV + +   W++S
Sbjct:   32 GQGSFAEVFLAKSDVDETYC-------AAKVFDKSLLRRK-----RTISRTVEGFKI-----HSELDKVDKEIGIMKKLVHPNLVRLLEVIDDKKDNQLFLLMEFVELGPVMK-YDRETNKFTSTVTGGLCEERLAGQYLLDIASGLGYLHLHHIAHRDLKPDNVLLGKLGRCKIADFGVAHYFEEDHANDKTLSVRSLERSHSRAQIRDTQGTYCFWAPEMIQGDKK---FNAYSCDMWAAGVCYFIFVTGKLPFYAESPVEMFDFIAQASPVIPNTLSNHSRRVIFGLLATNIDTRLTVQDLQSDPWLKS 322
[Close]
BLAST of mRNA_L-elsbetiae_contig995.18880.1 vs. uniprot
Match: A0A7S2RI55_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RI55_9STRA)

HSP 1 Score: 216 bits (551), Expect = 7.490e-59
Identity = 149/385 (38.70%), Postives = 201/385 (52.21%), Query Frame = 1 
Query:    1 GSVTKVNEYIIVRDIGEGSSAEVKLCRLVIPSRPPPSPGEHCDSPQSERHHASAFEACGDGRGREEEDGEGFYNDLYVRESKKWCGSKGKCSAVKIFDRTELMRRGARFARPRARGPDGALLPLAAASDNYIKVQREIAIMKKLVHPNIVQLVEVIDAPRDRSLYMVMEYAERGAVMRCVEPGMGRYECPVN-------GGCLDAPLA----AGYFADILAGLEYLHLHLIAHRDLKPENVLIGDDGRAKIADFGVSQYFTDDEPRTPKSARSLARSNSRAQMSTTEGTWCFWAPEMCGTRKEGAAFNAYAADSWAAGVTLWCFLYGKVPFFSLSPMDLFASIAVDPTPIPPGANTALRDLLERLLAKDPRERLTVPEAREHIWV 1122
            G VT VNEY I+  IG GS+A   LC            GEH           S F                                     A+K+F+++ L RR     R  +RG  G ++ +++A D   +V REIA+MKKL H N+V+L EVID   +  ++MV+E+ E G ++    P   R+  PV+        G   A  A    A Y  DIL GL++LH + IAHRDLKPENVLI  DG AKIADFGV+ YF D+E +  +   +LARS+S+ Q++ TEGT+ FWAPEMC    +G AFN YAAD WA GV ++C ++G +PF   S  DLF +I  +    P   +    D L  LL KDP +RL++ EA  H W+
Sbjct:   58 GEVTDVNEYHIIELIGTGSTASAYLCER--------RGGEH-----------SRF-------------------------------------ALKVFEKSMLSRR-----RTMSRGERGNMI-VSSALD---QVSREIAVMKKLEHINLVRLFEVIDDENEDQMFMVLEFVEGGTILDW-NPEEERFNLPVSQLKGPKRSGAASAMYAEEEAAAYTVDILRGLKFLHQNHIAHRDLKPENVLITGDGHAKIADFGVAHYFQDEEDKPLRP--NLARSHSQGQLTKTEGTYYFWAPEMC----DGLAFNGYAADLWALGVCVFCMVFGALPFSGSSATDLFDAIQTENLTFPSPVSEDCADFLSGLLNKDPDQRLSLEEAVAHPWL 370
[Close]
BLAST of mRNA_L-elsbetiae_contig995.18880.1 vs. uniprot
Match: A0A7R9U356_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U356_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.400e-50
Identity = 112/246 (45.53%), Postives = 148/246 (60.16%), Query Frame = 1 
Query:  400 VQREIAIMKKLVHPNIVQLVEVIDAPRDRSLYMVMEYAERGAVMRCVEPGMGRYECPVNGGCLDAPLAAGYFADILAGLEYLHLHLIAHRDLKPENVLIGDDGRAKIADFGVSQYFTDDEPRTPKSARSLARSNSRAQMSTTEGTWCFWAPEMC-GTRKEGAAFNAYAADSWAAGVTLWCFLYGKVPF-FSLSPMDLFASIAV---DPTPIPPGANTALRDLLERLLAKDPRERLTVPEAREHIWV 1122
            V RE+A+MKKL HP IV LVEVID      + M+ME    G +M   +    R+      G L    AA     +L G+ YLH + +AHRDLKPEN+L   DGR KI+DFGVS +F ++  +  +  R+L R  SR Q++ TEGTW FWAPEMC  TRK    ++AYAAD WAAGV LW F++G +PF  S  P DLF  I     +    P   +  L D ++RLL KDP++R++VP+A  H W+
Sbjct:  146 VAREVALMKKLEHPCIVDLVEVIDDVESDLIVMIMELMGNGPIMDYSDQEQ-RFVYQPTQGTLPEEDAAWTIKAVLLGIGYLHQNHVAHRDLKPENILRSSDGRVKISDFGVSHFFEEETAKERRPLRTLIRQESRGQLTKTEGTWAFWAPEMCTSTRKP--QWSAYAADLWAAGVCLWVFIFGTLPFDASGGPTDLFDMIERYDDEHVDFPHEVSPDLADFIKRLLRKDPKDRMSVPDALAHRWI 388
[Close]
BLAST of mRNA_L-elsbetiae_contig995.18880.1 vs. uniprot
Match: A0A267DDB4_9PLAT (Protein kinase domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DDB4_9PLAT)

HSP 1 Score: 194 bits (493), Expect = 3.240e-50
Identity = 127/310 (40.97%), Postives = 165/310 (53.23%), Query Frame = 1 
Query:  277 AVKIFDRTELMRRGARFARPRAR-----------GPDG-----------ALLPLAAASDNYIKVQREIAIMKKLVHPNIVQLVEVIDAPRDRSLYMVMEYAERGAVMRCVEPGMGRYECPVNGGCLDAPLAAGYFADILAGLEYLHLHLIAHRDLKPENVLIGDDGRAKIADFGVSQYFTDDEPRTPKSARSLARSNSRAQMSTTEGTWCFWAPEMCGTRKEGAAFNAYAADSWAAGVTLWCFLYGKVPFFSLSPMDLFASIAVDP---TPIPPGANTALRDLLERLLAKDPRERLTVPEAREHIWVRSW 1131
            A+KI  + +L R    F RP  R            P G           +L  +AAA D   +V REIA+ KKL HPN+V+LVEV+D P   +LYMV E  ERG VM          E P +   LD   A  YF DI++GLEYLH   I HRD+KP N+L+ DDGR KIADFGVS  F                S +   +S T G+  F APE    R+    F   A D WA GVTL+CFLYGKVPF     + L+ SI  D    + +PP +   + DL++R++ KDP  R+T+PE +EH+WV ++
Sbjct:  141 AMKILSKKKLRRSAGFFRRPPPRVLSAGSGPSIDNPSGVDSPSLGASSSSLAAVAAAPDPLQRVYREIAMQKKLNHPNVVKLVEVLDDPEQDNLYMVFELVERGQVM----------EVPTDSP-LDEETAWNYFRDIVSGLEYLHFQKIVHRDIKPSNLLLTDDGRIKIADFGVSNEF----------------SGNDILLSNTAGSPAFLAPEC--VREGQKYFTGRALDIWALGVTLYCFLYGKVPFDKDPKIALYHSIVHDQPEFSDVPPLSEYVI-DLMKRMMTKDPETRITLPEIKEHVWVTNF 420
[Close]
BLAST of mRNA_L-elsbetiae_contig995.18880.1 vs. uniprot
Match: A0A1I8GEH0_9PLAT (Protein kinase domain-containing protein n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GEH0_9PLAT)

HSP 1 Score: 194 bits (493), Expect = 5.180e-50
Identity = 127/310 (40.97%), Postives = 165/310 (53.23%), Query Frame = 1 
Query:  277 AVKIFDRTELMRRGARFARPRAR-----------GPDG-----------ALLPLAAASDNYIKVQREIAIMKKLVHPNIVQLVEVIDAPRDRSLYMVMEYAERGAVMRCVEPGMGRYECPVNGGCLDAPLAAGYFADILAGLEYLHLHLIAHRDLKPENVLIGDDGRAKIADFGVSQYFTDDEPRTPKSARSLARSNSRAQMSTTEGTWCFWAPEMCGTRKEGAAFNAYAADSWAAGVTLWCFLYGKVPFFSLSPMDLFASIAVDP---TPIPPGANTALRDLLERLLAKDPRERLTVPEAREHIWVRSW 1131
            A+KI  + +L R    F RP  R            P G           +L  +AAA D   +V REIA+ KKL HPN+V+LVEV+D P   +LYMV E  ERG VM          E P +   LD   A  YF DI++GLEYLH   I HRD+KP N+L+ DDGR KIADFGVS  F                S +   +S T G+  F APE    R+    F   A D WA GVTL+CFLYGKVPF     + L+ SI  D    + +PP +   + DL++R++ KDP  R+T+PE +EH+WV ++
Sbjct:  102 AMKILSKKKLRRSAGFFRRPPPRVLSAGSGPSIDNPSGVDSPSLGASSSSLAAVAAAPDPLQRVYREIAMQKKLNHPNVVKLVEVLDDPEQDNLYMVFELVERGQVM----------EVPTDSP-LDEETAWNYFRDIVSGLEYLHFQKIVHRDIKPSNLLLTDDGRIKIADFGVSNEF----------------SGNDILLSNTAGSPAFLAPEC--VREGQKYFTGRALDIWALGVTLYCFLYGKVPFDKDPKIALYHSIVHDQPEFSDVPPLSEYVI-DLMKRMMTKDPETRITLPEIKEHVWVTNF 381
[Close]
BLAST of mRNA_L-elsbetiae_contig995.18880.1 vs. uniprot
Match: A0A1E7FT08_9STRA (Kinase-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FT08_9STRA)

HSP 1 Score: 186 bits (471), Expect = 8.350e-50
Identity = 124/289 (42.91%), Postives = 156/289 (53.98%), Query Frame = 1 
Query:  277 AVKIFDRTELMRRGARFARPRARGPDGALLPLAAASDNYIKVQREIAIMKKLVHPNIVQLVEVIDAPRDRSLYMVMEYAERGAVMRCVE--PGMGRYEC----PVNG---GCLDAPLAAGYFADILAGLEYLHLHLIAHRDLKPENVLIGDDGRAKIADFGVSQYFTDDEPRTPKSARSLARSNSRAQMSTTEGTWCFWAPEMCGTRKEGAAFNAYAADSWAAGVTLWCFLYGKVPFFSLSPMDLFASIAVDPTPIPP-GANTALRDLLERLLAKDPRERLTVPEAREH 1113
            AVKI  ++ L RR     R   R  +   + +  A   Y +VQREIA+MKKL HPN+VQL EVID+P    LYMV+EY   G ++   E      R E      ++G   G  D   AA YF DIL GL YLH H I HRDLKPEN+L+ +   AKI DFGVS  F ++    P+                TEGTWCFW+PEMC   +    F+ YAAD WAAG+ L+ F+ GK+PF+S  P+DLF  IA         G +  L DLL+  L KDP  R  V +   H
Sbjct:    4 AVKILSKSNLKRR-----RTIERDRNTKSVKIRNA---YQQVQREIALMKKLSHPNLVQLYEVIDSPETDILYMVLEYMPLGEILTYQENTATFKRSESLRHKKIDGLFNGHFDEEHAALYFVDILHGLAYLHQHHICHRDLKPENILLSNRKIAKIGDFGVSHIFEEESENGPRRM--------------TEGTWCFWSPEMCNGSR---GFSLYAADIWAAGICLYIFVTGKLPFYSTVPLDLFEMIAKTEIQYSDLGLSDTLIDLLKCCLEKDPNCRAGVGDCLHH 267
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig995.18880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JDN4_9PHAE2.150e-16464.80Protein kinase domain-containing protein n=1 Tax=E... [more]
D8LKE4_ECTSI8.460e-16366.26Ca2+/calmodulin-dependent protein kinase kinase be... [more]
A0A4D9D4E9_9STRA5.480e-6338.04Protein kinase domain-containing protein n=3 Tax=M... [more]
A0A7S3Y6M6_HETAK9.920e-6248.56Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4E3P3_9STRA3.070e-6042.31Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A7S2RI55_9STRA7.490e-5938.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9U356_9STRA1.400e-5045.53Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A267DDB4_9PLAT3.240e-5040.97Protein kinase domain-containing protein n=1 Tax=M... [more]
A0A1I8GEH0_9PLAT5.180e-5040.97Protein kinase domain-containing protein n=2 Tax=M... [more]
A0A1E7FT08_9STRA8.350e-5042.91Kinase-like protein (Fragment) n=1 Tax=Fragilariop... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig995contigL-elsbetiae_contig995:22285..29449 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score210.3
Seed ortholog evalue1.5e-51
Seed eggNOG ortholog44056.XP_009037349.1
Preferred nameTIF35
KEGG koko:K03248,ko:K05666,ko:K07359,ko:K20304
KEGG TC3.A.1.208.2
KEGG Pathwayko01523,ko01524,ko02010,ko03013,ko04140,ko04152,ko04211,ko04920,ko04921,ko04976,ko05034,map01523,map01524,map02010,map03013,map04140,map04152,map04211,map04920,map04921,map04976,map05034
Hectar predicted targeting categoryother localisation
GOsGO:0001732,GO:0002181,GO:0002183,GO:0002188,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005852,GO:0006412,GO:0006413,GO:0006415,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0016043,GO:0016282,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0032984,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043614,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070993,GO:0071540,GO:0071541,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.translation initiation factor activity
EggNOG OGsKOG0122@1,KOG0122@2759,KOG0585@1,KOG0585@2759
EC2.7.11.17
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko02000,ko03012,ko04131
Ec32 ortholog descriptionCa2 /calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases
Ec32 orthologEc-16_002680.1
Exons10
Model size2346
Cds size1113
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig995.18880.1prot_L-elsbetiae_contig995.18880.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig995 23580..28685 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817053.8609836-UTR-L-elsbetiae_contig995:22284..231581622817053.8609836-UTR-L-elsbetiae_contig995:22284..23158Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig995 22285..23158 -
1691684012.2757947-UTR-L-elsbetiae_contig995:22284..231581691684012.2757947-UTR-L-elsbetiae_contig995:22284..23158Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig995 22285..23158 -
1622817053.87332-UTR-L-elsbetiae_contig995:23526..235791622817053.87332-UTR-L-elsbetiae_contig995:23526..23579Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig995 23527..23579 -
1691684012.2877836-UTR-L-elsbetiae_contig995:23526..235791691684012.2877836-UTR-L-elsbetiae_contig995:23526..23579Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig995 23527..23579 -
1622817053.9943702-UTR-L-elsbetiae_contig995:28685..287151622817053.9943702-UTR-L-elsbetiae_contig995:28685..28715Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig995 28686..28715 -
1691684012.3800771-UTR-L-elsbetiae_contig995:28685..287151691684012.3800771-UTR-L-elsbetiae_contig995:28685..28715Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig995 28686..28715 -
1622817054.005047-UTR-L-elsbetiae_contig995:29173..294491622817054.005047-UTR-L-elsbetiae_contig995:29173..29449Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig995 29174..29449 -
1691684012.3892176-UTR-L-elsbetiae_contig995:29173..294491691684012.3892176-UTR-L-elsbetiae_contig995:29173..29449Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig995 29174..29449 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817053.8859892-CDS-L-elsbetiae_contig995:23579..235991622817053.8859892-CDS-L-elsbetiae_contig995:23579..23599Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 23580..23599 -
1691684012.2974036-CDS-L-elsbetiae_contig995:23579..235991691684012.2974036-CDS-L-elsbetiae_contig995:23579..23599Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 23580..23599 -
1622817053.8974733-CDS-L-elsbetiae_contig995:23735..241081622817053.8974733-CDS-L-elsbetiae_contig995:23735..24108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 23736..24108 -
1691684012.3076286-CDS-L-elsbetiae_contig995:23735..241081691684012.3076286-CDS-L-elsbetiae_contig995:23735..24108Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 23736..24108 -
1622817053.9094129-CDS-L-elsbetiae_contig995:25204..252651622817053.9094129-CDS-L-elsbetiae_contig995:25204..25265Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 25205..25265 -
1691684012.318558-CDS-L-elsbetiae_contig995:25204..252651691684012.318558-CDS-L-elsbetiae_contig995:25204..25265Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 25205..25265 -
1622817053.9226635-CDS-L-elsbetiae_contig995:26103..262741622817053.9226635-CDS-L-elsbetiae_contig995:26103..26274Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 26104..26274 -
1691684012.328676-CDS-L-elsbetiae_contig995:26103..262741691684012.328676-CDS-L-elsbetiae_contig995:26103..26274Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 26104..26274 -
1622817053.9401891-CDS-L-elsbetiae_contig995:26841..269511622817053.9401891-CDS-L-elsbetiae_contig995:26841..26951Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 26842..26951 -
1691684012.3417256-CDS-L-elsbetiae_contig995:26841..269511691684012.3417256-CDS-L-elsbetiae_contig995:26841..26951Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 26842..26951 -
1622817053.9570086-CDS-L-elsbetiae_contig995:27663..277701622817053.9570086-CDS-L-elsbetiae_contig995:27663..27770Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 27664..27770 -
1691684012.3506877-CDS-L-elsbetiae_contig995:27663..277701691684012.3506877-CDS-L-elsbetiae_contig995:27663..27770Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 27664..27770 -
1622817053.969057-CDS-L-elsbetiae_contig995:27998..281761622817053.969057-CDS-L-elsbetiae_contig995:27998..28176Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 27999..28176 -
1691684012.3595755-CDS-L-elsbetiae_contig995:27998..281761691684012.3595755-CDS-L-elsbetiae_contig995:27998..28176Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 27999..28176 -
1622817053.9802656-CDS-L-elsbetiae_contig995:28592..286851622817053.9802656-CDS-L-elsbetiae_contig995:28592..28685Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 28593..28685 -
1691684012.3710198-CDS-L-elsbetiae_contig995:28592..286851691684012.3710198-CDS-L-elsbetiae_contig995:28592..28685Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig995 28593..28685 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig995.18880.1

>prot_L-elsbetiae_contig995.18880.1 ID=prot_L-elsbetiae_contig995.18880.1|Name=mRNA_L-elsbetiae_contig995.18880.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=371bp
MRRGARFARPRARGPDGALLPLAAASDNYIKVQREIAIMKKLVHPNIVQL
VEVIDAPRDRSLYMVMEYAERGAVMRCVEPGMGRYECPVNGGCLDAPLAA
GYFADILAGLEYLHLHLIAHRDLKPENVLIGDDGRAKIADFGVSQYFTDD
EPRTPKSARSLARSNSRAQMSTTEGTWCFWAPEMCGTRKEGAAFNAYAAD
SWAAGVTLWCFLYGKVPFFSLSPMDLFASIAVDPTPIPPGANTALRDLLE
RLLAKDPRERLTVPEAREHIWVRSWLERGCRQSGTTSGGGGVAPLRGALL
LAESSFSSSFSSPSRCEDDGPLFGAGNNPDGNVSCVGCSGCSGDGGGGGS
CGGGGSGGGGGGDGAAGWSP*
back to top

mRNA from alignment at L-elsbetiae_contig995:22285..29449-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig995.18880.1 ID=mRNA_L-elsbetiae_contig995.18880.1|Name=mRNA_L-elsbetiae_contig995.18880.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7165bp|location=Sequence derived from alignment at L-elsbetiae_contig995:22285..29449- (Laminarionema elsbetiae ELsaHSoW15)
GGATCGGTTACGAAAGTTAACGAGTATATCATCGTTCGCGACATCGGAGA
GGGCTCCTCGGCTGAGGTGAAGCTGTGCCGGTTGGTGATACCGTCGCGCC
CGCCTCCGTCGCCGGGTGAACATTGCGATAGTCCGCAGTCAGAGAGACAC
CACGCTAGCGCCTTTGAGGCTTGCGGAGATGGGAGAGGGCGGGAAGAGGA
GGATGGGGAAGGCTTCTACAACGATCTCTATGTACGTGAGAGCAAGAAAT
GGTGTGGATCAAAGGGGAAGTGTAGTGTAAGTGAGCCAACCCGGAATGCT
CTCTTTCCTGCGCGCTTTTTATAATGCAGGGTTGGCGCAGCTTGCAGCCA
ATGAAATCACTGATGTTTTACCCTTCTGGTGAGCGGACAACAATAAGAAG
GAGGACGATGTGATTGTGTACTACCAGGCGACACAGCAATATTCGCCAGT
TCCGAGAAAAAACTCGCATGTTTTCAACCCGCGTTCATAAAAAGCCTGTA
GTTCGCCGCCCCTCTCTTTCCCTGGTTATCTGTATCTTTGTATTTTGCCC
TTCGCTCTCTTTGCTCTCTCTCTCTTTCACTCATCACCATTTGTCTGTTA
GGAACTGCACTGGGGCCGAATCGGGGCAGGTTTTGGCCACGATGTGCCTG
TTTTTGTTGTTGCTATTGGTGGTGGTGGTGGTGTTGATGCTGCTGCTGCC
GTTTTCTGTGTGTGTGTTCCGCATGGCAAGACAGGCGGTGAAGATTTTCG
ACCGGACAGAGCTGATGCGGCGCGGCGCTCGATTCGCAAGGCCCCGGGCG
CGCGGGCCTGACGGGGCACTGCTGCCGTTGGCCGCCGCTTCTGACAATTA
CATCAAGGTGAGCAGGCACCGCAGAAACATCACCGGTTGAACAAAAGTAG
TCCTAGCGGAGGACCCTTTTGTGGTAGCGAGTACGTGGGAGAGAGCGTGT
GTTCGTGCAACCCTGCGATAGCGCTCTCGACAAGGTGGCATCGTTAGTTT
TTTTGTAGCTGCGTTGCTATGCAGCTGTACGCAGCGTCGGTTTCTAGTGT
AATCCTTCCCGACCAGGGGCACAAAACTCAAGGGTGGGGATCCCCACCGC
CGCCATCGCCACCACCGCCACCAAAAACTCCAGGTTCGGTGTGAATCTTA
CAAGGATGTTCGCGTGTTCATGTTTTTGTCGTTCCCTTGATTCATCTCCA
CTTGCGCGTCTGTCATATTTGGGCTCGCAAACCCCACGTTCTCCAACCAT
CATTTACGTCGTCACGTGTGTAGGTGCAGCGAGAGATTGCTATCATGAAG
AAGTTGGTGCACCCAAACATCGTCCAGCTCGTGGAGGTGATCGACGCCCC
TAGAGACCGGTCCCTGTACATGGTTATGGAATATGCGGAGAGGGGCGCGG
TGATGCGCTGCGTCGAGCCGGGGATGGGTCGCTACGAGTGCCCCGTAAAT
GGTGAGAGCTTTTTTGGGTCATGGGCTTTGGTTGTCTACCGGGTGCAAGG
GCAAGTGAGACGCCGTAGGTGAGACTAGCACGTTCTCAACGAAGCGCCGA
GACCAAGAGCCCCTTCGGAAAAAGCTCGATCTGTGAATTTTTCTTGCACA
TGGTCAATGTTTTCTGCCGTGTGCTCTTCGGGTGGTGGTTTAACAGTTTG
ATATTTTGATTGCAATTGCTCCGTTATAGGCGGTTGCTTGGACGCCCCAC
TGGCGGCCGGCTACTTTGCGGACATACTGGCCGGGCTGGAGTACCTCCAC
CTTCACCTCATCGCACATCGAGACCTCAAGCCGGAGGTAAAACACAAGAA
ATGCAAAAACTCCCGCAAGTCGGACCACATGGTAAAAGAATCCCACGGCC
ATCCCCCGTGATGTCTTCCCCTAACCACAATGCATTGGATAGTATAGTGA
CAGGAACGCTATTGGCGCGCTTCTTGCGTTACCCATTTTTTGCGATAAAT
TAAGGAGAACTAACGAAGCCCCCACCCAAGACGGGAAGGAAGGACTGAGG
GTACTGGGGTATGTCGCATGTTGCGGTTGCCTTACGCTTACGCAGCAGAG
AAAGCAGAGAAAAGCAATAGCGTTCAGCTCTGCCGCTGCGAACAACAAGA
GGTGTTGACTTGGAAGGTGTGCGCATTTCTTCGCTTGCCGCAAGCCTAAG
TGGACGGTGGACGCGCTTTGACCCACCTCCCGTAGTCGCAACATACTCCT
ATGTTACTTCATTTTGTTTCCCCGCCGCCTGACCAAACAGGCAAGCCGCT
GCCTTTTCCGCAACGGGTGCTGTTTTTGTTTCGGCACGCGAAGGAATAGA
CCACCCTCCGCCGCCTGCGTCGACCGATCGACTCAAAGTCAAGCTCCTTT
TAGTTGCGCGTCGGGTGGCGGGAGGGCTCTAGTGTCGCGCCCCTCGCTCT
CTGTCCGGAAATATTGATCGGTCGTTGCATTGCATCGGTTGCACCACGAC
CCCGACTGATGAATAATTACAAAACCACTCCACACATACACACAACAGAA
TGTCCTGATTGGAGACGACGGCCGAGCGAAGATAGCGGACTTTGGCGTCT
CTCAGTACTTCACCGACGACGAACCACGGACTCCTAAGTCGGCGCGCTCC
CTGGCCAGGTACGTGAACAAACGTACACACGTGCCTTCATTTTTGGGGGC
CCTTTTGAGGGCAAGCAGCGCACGCAGTGTATGTACCCGGCACCTGGTAT
ATACTTTCGGGTTTGGGAGCGCCCCTTATCATGCGTAACGCCCCTTATCG
ATCCGTGTTCTTAGTGGTGGTGGTGGTGATTTTGGTGGTGGAACTCGTGG
TTGTCAGCTTTGTAAAGGGGGTGTCGGCGATGGGGATGGCGAAGCAATCA
AATAGCTGCTCCTCGTGGGCAATTTTTTTAAGCGGGCGGCAACATGTACC
AGCTAGTATGGGGCACTTTTGACACGGCCTTACTCTAGTTTGAAACGTCT
CCCCCTCCGTGACTGGTCTTTAGGCGATACAGCGCCGAACAGACTTGAAG
GTGGTGCTTTCTAAGGGATGTGCGACGGATCTATTCTAGCCCGAAAGATG
ACTGCGGTCATCCCCAACGTTCGACAGACATAAGTATTTGTTTGCACCTT
TGTACATACCCCGTTCCTCCCTCTCTTTCTCCCATAAACAAGCCGTTAAC
GCCTCCCGCAAACCAACAACAACAGGTCCAACTCTCGTGCTCAGATGAGC
ACCACGGAGGGCACGTGGTGCTTCTGGGCGCCGGAGATGTGCGGCACGCG
GAAGGAGGGGGCTGCCTTCAACGCCTACGCAGCCGACTCATGGGCGGCGG
GGGTGACGCTCTGGTGCTTCCTGTACGGAAAGGTGCCGTTTTTCAGGTTC
GTTTCGTTCTTCGCGGAGTCTTGTTACAATATGGTGCTGAGTCGGTTTTT
TTTTGCGAGACTGCTGCACTTGCTGTGTAGACAGCCGTGTTTTTGGTGCC
GAGTCCTTTCTTTTTTTGCAACACTAAATAGATTACTGCTCTTCTTGCTG
TGTAGACAGCAACTGCAGATGTCGTCGTCGTCGTCGTCGTCGTCACCTGT
TGTCGCTGAGGTTTGGCCCTGGCGCGACTTGTTGCCGACGTTTTACTTTT
TTTTTGTTTTTTTGCGTGTTTTTGCGTGTCCCGCTCGGCTTGTGCCTGCG
TATTGGCGTGCCTTTGGTGATCGTGAGGTTTTTCGGATATAGGGTTGTTG
ATGTTATTGGTGGTGGTGGTGTGCTATGGCCATCCCCGTTTGAAAGTCTC
CCCTCTTTTTTTCTACAAGTCGTTCCAGGGAACTGTTGACAACACACATG
CCGTATCCCCGCGCCCACCTACACTTGTTTGAAAGCTGGTCATGCAGTTA
CGTGGCACCTAAGGTGAGCCTAGCTGCACTTATTCACACTTTTGGAAGAC
AGCTAACACAAAAGAAAGGGATCCATTGGTGCACGGCATTGGAATCTATC
TAACCCGGCACCATCTCTGGTCGTAGACTGCTGACGTAACACACACATCA
TAGAAGTATATTTTGTTTTTTCACGCGCATTCCCAAGTAGATTCCACTTT
TGGTTGCGGCCACCGCTTGCGCAACACCCCCTAACTGCCGTTGCATTGCG
TTCGTTTCGACGTGTTTGACGCCTCCTGCCTGCCTGCCTGCCTGCCTGCC
TGCCTGCTTGCTCGACTGACACTGACTCCTTCAGCCTCAGCCCCATGGAT
CTGTTCGCGTCGATCGCCGTGGACCCGACACCCATACCGCCAGGGGTGAG
TTTTGCTCTTTCGCTGCGGGCGCGCGCGTACGTGCGTGCGTGCGGCTGTC
CACGCACGTGCGTTCTTGGGGCGGCGTGGTTTGCTTCGCTCTCGAGCAAA
AGAGTTCACTTGACAGGAAGAGCGCCTTGAGGGAGGCTGGTCGGTATCTT
GGTTCGTCTTCAAACTCCTCGCGCATCAATGGTTCGAGATGTCCGCATTG
CTTTTGCGGGCGCAGACCGTGCCAAGCGGCTGACCATTTATGGTAAAAGA
CTGCCGTTTGTAAGGTTGAGGCAACAACCGAAGGCTACCGTCAGTGTTGC
CGGGACGCCTCAGGAAAAAGGCTATCGTTTGGTCCGGCCATGCAACGAGT
GGACCGAAGCTCGCTCCGGAGCTTGTGGTAGTTGCAAAAATTACGCCCTC
CGAGTACGAAAACAAGCGCAAAAAAGGGGGAAGAAAATGAAGTGATGGCG
AAGTCGGCGTCAGTATTCGCAAGTGCTGTTTTAGCCCTGCTGCTGCTGCT
ACTGCCGCCGCCGCTGCCGCTGCTGCCGTTTTTGTTGTCGATTCTCGGCT
GGGGAGGATAGAAGGATAGAAGGAGAGGCCAACCTAACCTCCCGTGTGTC
CGTATGTCTTTCTCCCGGCGGGTCGTGTGTTGAGTGCGTGCGTATTGTAT
TTGTGCGGTGCCTGCCGTGTGCCGGTAAAAAGATTGATTGGAAGGTAGTC
AGTCGTAGTTGGGGGCGGGTTTGGCGGTTAGCCTGTAAATACTTGCCCAA
CAAAGCCGACCGCTAGCGTGAGTGGAGCACAATCGAAACGATGTACCGGC
ATAGAAACACGAGAGAGTCTTCAAAACGTGCGGTAGAAGGCCATATCGTC
AGGATTAACCAGCAGAGTGGTTTATTGCACTGCCGGGGTGTTGTAGCATA
TTCGTGACGGAAGTGCGCTTGGTCTTCATGGGACTTACGGAACAGCCTTT
ACAGCGATCCGCTCTGCGCGGTTTTGCCCGCTTGCTTGCTTGCTTTAATC
TGGCGTGCCCGCCCCCCTATGTATGGCCCCGAACGACTCCGGCGCGCATG
GTCATTTAACACCCCCCCCGTGTGTGATGGTTGCTGCCCAGGCGAACACG
GCCCTCCGAGACCTCCTCGAGAGGCTTCTTGCCAAAGATCCAAGGGAGCG
CCTCACCGTGCCGGAAGCTCGCGAACACATCTGGGTTCGGTCGTGGCTGG
AGAGGGGGTGCCGTCAGAGCGGTACTACTAGCGGTGGTGGTGGGGTTGCT
CCCCTGCGAGGCGCATTGCTGCTGGCGGAGAGCAGCTTTTCTTCCTCGTT
TTCGTCTCCCTCTCGTTGCGAAGACGACGGACCTCTCTTTGGCGCCGGCA
ACAATCCGGACGGCAATGTCAGCTGTGTTGGTTGTAGTGGTTGTAGTGGT
GATGGTGGTGGCGGTGGTAGCTGTGGTGGGGGGGGTAGTGGTGGTGGTGG
TGGTGGTGATGGTGGTGGTGATGGTGGTGATGGTGGGAGTGGCGGCGGTG
ACAGTGGTGGTTGGGAAGAGGGCGGCACCTTTGACGGTTCCGCACCTCGT
TACCATGTCGGTGGGGGGCTTCGGGGCCTTTCCGCGGAGCTGACTGGAAG
CGGCAGGATGGTCGCCGTGACTGACGAGGACATAAGAGCTGCGGTAACCC
AAGCCTCCGGTTTCGTTGTCGTGGTGAGCGGGCGAAGAGGCAGAGAGGGA
GTAGATGTTGATGATCATGGGAAGGTTTGAGTGGGTTGTGAGGGGCGGCT
GTCTTGTTTCGGTCTCATTGTCGGTGTGTTGTTTTCGCTGTGGCGTTACG
TGGCGCTTGGAAAGCAAACGAAAAGCCAAATGCTAGAAAACGAGGTGTTT
CTAGGCGGTTCTTGGCGGATACCCTCATCGCGTGTGCGTTGCTGGTTCGA
TGGTGGCCAACCTCTGGCTTGGCTCCTCAGGTGCGCCACATGATACTTTT
CGTGCCTCTCACCACGTGAACACATTCCGTGGTTGCTGCCCTCGCGCGCT
TGGTGCTGGCATGTGCCGGCGCTTTGATCCCCCCCATCCAGGCCAAGCTA
AAGGACAAGATGCACGGGATAAAGGAAAGGGCGCGCCGCCTTTCGAGCGA
GCTCGGGGCGGCCACGAGGGTCGCCGCTCTCAGAGGAGCAAAACAGAAAG
CAAGGCGGCGGCGTTACATCCACGCCTGCGGCGAAACCCAAAGCCAAAGC
GAAGACGAAGACGAAGACAGCGGCGGGGACGTTGCCACCGCAGCAGCCGC
CGGAGTCGCCGCGGGCACTCCGGCGGGAGACGGAGGACGCGAGGCCTGCG
ACGACGCGCCGATAGAAAAAGAGCGACTCCACCCGGAGGAGAGAGAAGAG
ACGAAGGAGGAAGAGGGGGGCGGGGGGGCGCCTCATCGCCGACGCCGAGC
GTCGTCCACCGCCTGCCTGGTCAGCTAGCTAGAAACGCGCCAAGCAGCGA
GCCTCTCCCACCAGATGTTAGTTGGACGTGGTCACCTCGTCGAACACGAA
CCTAAGAATAAGCGCGCCGAGGGGATAGACGTGGTCTATTCGACCAAAAA
GGCGCCCAGGGATAGTTACGCCGTGTTCGCTGTTGTATATAGATGCCATC
GGGTGAGTGAGTGCCATCGGCGACAAGAGAGCACCGTGTAAGTATTACTT
GGGGCACTCTCCGCACATGCCTTTGTTTTTGTGGGAGTGCTTCGTTTTTG
TTGTCCGGGGTTGGTTCTTTTTTTTTCTTAAAAAATTAATGCGTCTGCAG
CAGACATTCAGTGAAATGTGTGTTACTTCGTACTTTTCCCTGTGTTCCTA
CCCTTTTGGAGTATGGGGTGGTGTGCTCCCTCTCTCCCACGCGCCGTTTC
GTTTTGGATGTGATTCTTGTCTTGAGTCGCGCCTTGCGTGCATGGCCCCA
AGAAGTTCTGTCAAG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig995:22285..29449-

>mRNA_L-elsbetiae_contig995.18880.1 ID=mRNA_L-elsbetiae_contig995.18880.1|Name=mRNA_L-elsbetiae_contig995.18880.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2226bp|location=Sequence derived from alignment at L-elsbetiae_contig995:22285..29449- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGGCGCGGCGCTCGATTCGCAAGGCCCCGGGCGCGCGGGCCTGACGG
GGCACTGCTGCCGTTGGCCGCCGCTTCTGACAATTACATCAAGATGCGGC
GCGGCGCTCGATTCGCAAGGCCCCGGGCGCGCGGGCCTGACGGGGCACTG
CTGCCGTTGGCCGCCGCTTCTGACAATTACATCAAGGTGCAGCGAGAGAT
TGCTATCATGAAGAAGTTGGTGCACCCAAACATCGTCCAGCTCGTGGAGG
TGATCGACGCCCCTAGAGACCGGTCCCTGTACATGGTTATGGAATATGCG
GAGAGGGGCGCGGTGATGCGCTGCGTCGAGCCGGGGATGGGTCGCTACGA
GTGCCCCGTAAATGGTGCAGCGAGAGATTGCTATCATGAAGAAGTTGGTG
CACCCAAACATCGTCCAGCTCGTGGAGGTGATCGACGCCCCTAGAGACCG
GTCCCTGTACATGGTTATGGAATATGCGGAGAGGGGCGCGGTGATGCGCT
GCGTCGAGCCGGGGATGGGTCGCTACGAGTGCCCCGTAAATGGCGGTTGC
TTGGACGCCCCACTGGCGGCCGGCTACTTTGCGGACATACTGGCCGGGCT
GGAGTACCTCCACCTTCACCTCATCGCACATCGAGACCTCAAGCCGGAGG
CGGTTGCTTGGACGCCCCACTGGCGGCCGGCTACTTTGCGGACATACTGG
CCGGGCTGGAGTACCTCCACCTTCACCTCATCGCACATCGAGACCTCAAG
CCGGAGAATGTCCTGATTGGAGACGACGGCCGAGCGAAGATAGCGGACTT
TGGCGTCTCTCAGTACTTCACCGACGACGAACCACGGACTCCTAAGTCGG
CGCGCTCCCTGGCCAGAATGTCCTGATTGGAGACGACGGCCGAGCGAAGA
TAGCGGACTTTGGCGTCTCTCAGTACTTCACCGACGACGAACCACGGACT
CCTAAGTCGGCGCGCTCCCTGGCCAGGTCCAACTCTCGTGCTCAGATGAG
CACCACGGAGGGCACGTGGTGCTTCTGGGCGCCGGAGATGTGCGGCACGC
GGAAGGAGGGGGCTGCCTTCAACGCCTACGCAGCCGACTCATGGGCGGCG
GGGGTGACGCTCTGGTGCTTCCTGTACGGAAAGGTGCCGTTTTTCAGGTC
CAACTCTCGTGCTCAGATGAGCACCACGGAGGGCACGTGGTGCTTCTGGG
CGCCGGAGATGTGCGGCACGCGGAAGGAGGGGGCTGCCTTCAACGCCTAC
GCAGCCGACTCATGGGCGGCGGGGGTGACGCTCTGGTGCTTCCTGTACGG
AAAGGTGCCGTTTTTCAGCCTCAGCCCCATGGATCTGTTCGCGTCGATCG
CCGTGGACCCGACACCCATACCGCCAGGGCCTCAGCCCCATGGATCTGTT
CGCGTCGATCGCCGTGGACCCGACACCCATACCGCCAGGGGCGAACACGG
CCCTCCGAGACCTCCTCGAGAGGCTTCTTGCCAAAGATCCAAGGGAGCGC
CTCACCGTGCCGGAAGCTCGCGAACACATCTGGGTTCGGTCGTGGCTGGA
GAGGGGGTGCCGTCAGAGCGGTACTACTAGCGGTGGTGGTGGGGTTGCTC
CCCTGCGAGGCGCATTGCTGCTGGCGGAGAGCAGCTTTTCTTCCTCGTTT
TCGTCTCCCTCTCGTTGCGAAGACGACGGACCTCTCTTTGGCGCCGGCAA
CAATCCGGACGGCAATGTCAGCTGTGTTGGTTGTAGTGGTTGTAGTGGTG
ATGGTGGTGGCGGTGGTAGCTGTGGTGGGGGGGGTAGTGGTGGTGGTGGT
GGTGGTGATGGTGGCGAACACGGCCCTCCGAGACCTCCTCGAGAGGCTTC
TTGCCAAAGATCCAAGGGAGCGCCTCACCGTGCCGGAAGCTCGCGAACAC
ATCTGGGTTCGGTCGTGGCTGGAGAGGGGGTGCCGTCAGAGCGGTACTAC
TAGCGGTGGTGGTGGGGTTGCTCCCCTGCGAGGCGCATTGCTGCTGGCGG
AGAGCAGCTTTTCTTCCTCGTTTTCGTCTCCCTCTCGTTGCGAAGACGAC
GGACCTCTCTTTGGCGCCGGCAACAATCCGGACGGCAATGTCAGCTGTGT
TGGTTGTAGTGGTTGTAGTGGTGATGGTGGTGGCGGTGGTAGCTGTGGTG
GGGGGGGTAGTGGTGGTGGTGGTGGTGGTGATGGTGCGGCAGGATGGTCG
CCGTGACGGCAGGATGGTCGCCGTGA
back to top