prot_L-elsbetiae_contig9930.18865.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9930.18865.1
Unique Nameprot_L-elsbetiae_contig9930.18865.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length173
Homology
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BLAST of mRNA_L-elsbetiae_contig9930.18865.1 vs. uniprot
Match: D7FIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN4_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.690e-14
Identity = 68/105 (64.76%), Postives = 73/105 (69.52%), Query Frame = 0 
Query:   20 RVSVSGHMFWERNLRTVSKITSKKKDNSPSGKKDALRRATRKAGXXXXXXXXXXXXXXXXXXXXX--------------EDGRPSVGTWTKAQTYLQILKELSGK 110
            RVS SGHM WERNLRTVSK   KKK  S   KK+AL RA R+ G XXXXXXXXXXXXXXXXXXXX              EDGRPS+GTW   Q YL+ILKE+SGK
Sbjct:  655 RVSASGHMAWERNLRTVSKFQPKKKVTSLPSKKEALHRAMRRGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGEDGRPSIGTWATTQNYLKILKEISGK 759
[Close]
BLAST of mRNA_L-elsbetiae_contig9930.18865.1 vs. uniprot
Match: A0A6H5KD39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD39_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 7.640e-13
Identity = 66/101 (65.35%), Postives = 70/101 (69.31%), Query Frame = 0 
Query:   21 VSVSGHMFWERNLRTVSKITSKKKDNSPSGKKDALRRATRKAGXXXXXXXXXXXXXXXXXXXXX-----------EDGRPSVGTWTKAQTYLQILKELSGK 110
            VS SGHM WERNLRTVSK    KK  S   KK+AL RA R  G XXXXXXXXXXXXXXXXXXXX           EDGRPS+GTW   Q YL+ILKE+SGK
Sbjct:  649 VSASGHMAWERNLRTVSKFQPNKKVTSLQRKKEALHRAMRTGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDGRPSIGTWATTQNYLKILKEISGK 749
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9930.18865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIN4_ECTSI2.690e-1464.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KD39_9PHAE7.640e-1365.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9930contigL-elsbetiae_contig9930:6677..7195 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9930.18865.1mRNA_L-elsbetiae_contig9930.18865.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9930 6325..7384 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9930.18865.1 ID=prot_L-elsbetiae_contig9930.18865.1|Name=mRNA_L-elsbetiae_contig9930.18865.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=173bp
MVWPSTYSKNVAHEIVFGGRVSVSGHMFWERNLRTVSKITSKKKDNSPSG
KKDALRRATRKAGNGGGGGGRGGGGGGGGEGGGGEDGRPSVGTWTKAQTY
LQILKELSGKVGFAFEASCQPLACLWKRGVPKKLPGGASACLSLSRNDNR
GNDDAYLSQMSKCRMCVSRVVP*
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