mRNA_L-elsbetiae_contig9924.18862.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9924.18862.1
Unique NamemRNA_L-elsbetiae_contig9924.18862.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig9924.18862.1 vs. uniprot
Match: D7G3I4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I4_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 2.270e-43
Identity = 205/510 (40.20%), Postives = 247/510 (48.43%), Query Frame = 1
Query:  439 EVDEAADRNSELMDEIARMDEESILLEAESDLMAITIDSSDXXXXXXXXXXXXXXXXXXXXXRGAEASSSTQDEKEVEAEGAGPADGSRASLDDSGYAPDAETTPSSAGAVDEAISGEEWEEEGVSSDGKSAEAAAVVATVSGAGGSCSGRHAVAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVDNAVRETLENLTAGVAILVGDEQ-----FLSCSEVLSELQSDAGDD---------------------------------HGGXXXXXXXXXXXXXXXXXXEGGIPLLAGARAGESLQTVAGSAPHKRLKIAVGPDMQEEEPPVPRLQWGVNSVLMDSPLTPSRYDSGDGSRSPSACSVSPCRLASTSLLLQETAEDGEGLGGGPLAIEVEVEGDDGDAADDDDNAVEEARDSSSWEEGAPQAFMGPLSPLSIASSPEFLGASEPSKQNG-WGGRLSVVSEGHESRAS 1851
            E D+AA+ ++ +MD+IARMDE+SILL+AE+ LMAI+IDS D                       AEA+                  G+R+SLDDSGYAPDAE  P S   VD+               G + +A   +A   G+    S      PS                        XXXXXXXXXXXXXXXXXXXXXXX                  VD AVRETL+NL AGVAIL G ++      L C EVLSELQS+ GD                                   G                   E   PL A   AGES++T      HKRLKIAVG ++QEEEPPVPRL WGVN + MDSPLTPSRYD     R+PS  S+SPCR   T LLL++ +E     G   L IE  + G+  +   +D +  EE R SS W  G P+  M PLSP S+ SSP+ L  SE +K N  WGGRLSV+SEG ESR S
Sbjct:  973 EKDDAAEISA-VMDDIARMDEQSILLDAETALMAISIDSGDDV---------------------AEAAGG----------------GARSSLDDSGYAPDAEMNPPSLAGVDDDAPA-----------GPARDADPQLAAERGSFDPASAGEEEGPSDVEGETATGDERRVLASPVASDHDXXXXXXXXXXXXXXXXXXXXXXXGGESTGG-----------VDAAVRETLDNLAAGVAILAGGDEEECDELLGCDEVLSELQSEDGDAGEGTVGDXXXXXXXXXXXXXXXXXXXXDEDPGVRGTKEAGGDGAGDVDAGGAVVEEHAPLAAKELAGESVRTGL----HKRLKIAVGSELQEEEPPVPRLHWGVNHIAMDSPLTPSRYDD---ERAPSTSSLSPCRQEFTGLLLEKGSESAGSTGA--LTIEPGLLGNSSNGGAND-SFEEETRVSSPWR-GDPERLMSPLSPFSVDSSPDALEESELTKPNKLWGGRLSVLSEGGESRLS 1411          
BLAST of mRNA_L-elsbetiae_contig9924.18862.1 vs. uniprot
Match: A0A6H5KR12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR12_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.740e-41
Identity = 240/593 (40.47%), Postives = 285/593 (48.06%), Query Frame = 1
Query:  439 EVDEAADRNSELMDEIARMDEESILLEAESDLMAITIDSSDXXXXXXXXXXXXXXXXXXXXXRGAEASSSTQDEKEVEAEGAGPADGSRASLDDSGYAPDAETTPSSAGAVDEAISGEEWEEEGVSSDGKSAEAAAVVATVSGAGGSCSGRHAVAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVDNAVRETLENLTAGVAILVGDEQ-----FLSCSEVLSELQSDAGDDHGGXXXXXXXXXXXXXXXXXX----------------EGG-----------------IPLLAGARAGESLQTVAGSAPHKRLKIAVGPDMQEEEPPVPRLQWGVNSVLMDSPLTPSRYDSGDGSRSPSACSVSPCRLASTSLLLQETAEDGEGLGGGPLAIEVEVEGDDGDAADDDDNAVEEARDSSSWEEGAPQAFMGPLSPLSIASSPEFLGASEPSKQNGW-GGRLSVVSEGHESRASAGSAGDGGDVNGDGGGDDGTASLMKKARCMTGGTEETASPPSRRVSTEFL-PPADATAAA-------------GDGAAEPGQD 2058
            E D+AA+ ++ ++++IAR DEESILL+AE+ LMAI+ DS +                       AEA                   G+R+SLDDSGYAPDAE  P S   VD+               G + +A   +A   G+    S R    PS                      XXXXXXXXXXXXXXXXXXXXXXXXXXX                VD AVRETL NL AGVAIL G ++      L C EVLSELQS+ GD   G            XXXXXX                EGG                  PL A   AGES++T      HKRLKIAVG ++QEEEPPVPRL WGVN + MDSPLTPSRYD     R P   S+SPCR   T LL+++ +E     G   +   +     +G A   +D+  EE R SS W  G P+  + PLSP S+ASSP+ L  SE +K N   GGRLSV+SEG ESR S  S G          GDD TA   K      G  E+TASP S+  STE L PP    AAA             GDG A P QD
Sbjct: 1008 EKDDAAEIST-VINDIARTDEESILLDAETALMAISNDSGNDV---------------------AEAVGG----------------GTRSSLDDSGYAPDAEMNPPSLAGVDDDAPA-----------GPADDADPQLAAERGSFDPASAREEEGPSDVEGETATGDEQRVSASPVASDXXXXXXXXXXXXXXXXXXXXXXXXXXXESTGG-----------VDAAVRETLNNLAAGVAILAGGDEDECDELLGCDEVLSELQSEDGDAGAGTVGDTAREDSAEXXXXXXXXXXXXDEAPGVRGTKEGGSDGAGAADAGGAVVEEHAPLAAKGLAGESVRTGL----HKRLKIAVGSELQEEEPPVPRLHWGVNHIAMDSPLTPSRYDDD---RVPPTSSLSPCRQEFTGLLVEKGSESAGSTGAHTIEPGLLGNKSNGGA---NDSFEEETRVSSPWR-GDPERLISPLSPFSVASSPDALEGSELTKPNKLCGGRLSVLSEGGESRLSRESRGSVESKVTSVAGDD-TAGPQKGRHTTGGADEQTASPSSQWASTEPLSPPPSIRAAASPAVGSXXXXXXXGDGTALPQQD 1528          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9924.18862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3I4_ECTSI2.270e-4340.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR12_9PHAE1.740e-4140.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9924contigL-elsbetiae_contig9924:554..5789 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-19_004720.1
Exons4
Model size2119
Cds size2118
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9924.18862.1prot_L-elsbetiae_contig9924.18862.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9924 555..5789 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817052.019526-CDS-L-elsbetiae_contig9924:554..9271622817052.019526-CDS-L-elsbetiae_contig9924:554..927Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9924 555..927 -
1691684010.9791603-CDS-L-elsbetiae_contig9924:554..9271691684010.9791603-CDS-L-elsbetiae_contig9924:554..927Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9924 555..927 -
1622817052.0325775-CDS-L-elsbetiae_contig9924:2404..26681622817052.0325775-CDS-L-elsbetiae_contig9924:2404..2668Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9924 2405..2668 -
1691684010.9911828-CDS-L-elsbetiae_contig9924:2404..26681691684010.9911828-CDS-L-elsbetiae_contig9924:2404..2668Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9924 2405..2668 -
1622817052.0438662-CDS-L-elsbetiae_contig9924:3530..36631622817052.0438662-CDS-L-elsbetiae_contig9924:3530..3663Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9924 3531..3663 -
1691684011.002149-CDS-L-elsbetiae_contig9924:3530..36631691684011.002149-CDS-L-elsbetiae_contig9924:3530..3663Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9924 3531..3663 -
1622817052.0552442-CDS-L-elsbetiae_contig9924:4441..57891622817052.0552442-CDS-L-elsbetiae_contig9924:4441..5789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9924 4442..5789 -
1691684011.012836-CDS-L-elsbetiae_contig9924:4441..57891691684011.012836-CDS-L-elsbetiae_contig9924:4441..5789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9924 4442..5789 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9924.18862.1

>prot_L-elsbetiae_contig9924.18862.1 ID=prot_L-elsbetiae_contig9924.18862.1|Name=mRNA_L-elsbetiae_contig9924.18862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=706bp
GGAGAWALDTSCEDPEEEGHEQVGRVSTAAPPDGDQARAERLSGVSVIGP
GTLSDEGEEGEEEEEETEGFFMPMADLGGQGNGCCPAGQGGEHAPSPEPA
AVAAPVSAQEEEGPPLLPGAEVVEPEAAAAVGGVPLPAEEEGGGGGEVDE
AADRNSELMDEIARMDEESILLEAESDLMAITIDSSDDGDAAAAADDDDS
DDPGDDDHRGAEASSSTQDEKEVEAEGAGPADGSRASLDDSGYAPDAETT
PSSAGAVDEAISGEEWEEEGVSSDGKSAEAAAVVATVSGAGGSCSGRHAV
APSAEEEEAQDGTEHAAAAAAAAAVAAAAGNASATAAAAAAAAATAAAAA
AAAAAAECAAAAAESAAVVDNAVRETLENLTAGVAILVGDEQFLSCSEVL
SELQSDAGDDHGGKAAGGAGGGAVEEEEQEQEGGIPLLAGARAGESLQTV
AGSAPHKRLKIAVGPDMQEEEPPVPRLQWGVNSVLMDSPLTPSRYDSGDG
SRSPSACSVSPCRLASTSLLLQETAEDGEGLGGGPLAIEVEVEGDDGDAA
DDDDNAVEEARDSSSWEEGAPQAFMGPLSPLSIASSPEFLGASEPSKQNG
WGGRLSVVSEGHESRASAGSAGDGGDVNGDGGGDDGTASLMKKARCMTGG
TEETASPPSRRVSTEFLPPADATAAAGDGAAEPGQDGGAGAAAGAADDKR
SPSQEE
back to top

mRNA from alignment at L-elsbetiae_contig9924:554..5789-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9924.18862.1 ID=mRNA_L-elsbetiae_contig9924.18862.1|Name=mRNA_L-elsbetiae_contig9924.18862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5236bp|location=Sequence derived from alignment at L-elsbetiae_contig9924:554..5789- (Laminarionema elsbetiae ELsaHSoW15)
GGCGGCGCCGGGGCGTGGGCTCTCGATACCAGCTGCGAAGACCCAGAGGA AGAGGGCCACGAGCAAGTCGGACGGGTGTCTACGGCGGCTCCCCCTGACG GCGATCAGGCGAGGGCAGAACGCCTGTCGGGGGTGAGCGTCATCGGGCCC GGCACTCTCTCGGACGAAGGCGAAGAGGGAGAGGAGGAGGAGGAGGAGAC GGAGGGCTTCTTCATGCCGATGGCGGATCTTGGAGGGCAGGGCAATGGAT GCTGCCCCGCCGGCCAGGGCGGAGAGCACGCCCCCTCGCCGGAGCCAGCG GCCGTTGCCGCACCCGTGTCTGCACAAGAAGAGGAGGGCCCGCCGCTGCT CCCAGGGGCCGAGGTTGTTGAGCCGGAGGCGGCGGCGGCGGTGGGCGGCG TACCGCTGCCGGCGGAGGAGGAGGGTGGTGGTGGTGGCGAGGTGGACGAG GCCGCAGACCGAAACAGCGAACTGATGGACGAGATCGCGAGGATGGACGA GGAGAGCATCCTTCTGGAGGCCGAGAGCGACCTGATGGCCATCACGATCG ACAGCAGCGACGACGGTGATGCCGCCGCCGCCGCCGACGACGACGACAGT GACGACCCAGGCGATGACGACCACCGTGGTGCCGAGGCCTCGTCCTCCAC CCAGGACGAGAAGGAGGTCGAAGCCGAAGGCGCCGGTCCGGCTGATGGTT CGCGAGCGTCGTTGGACGACAGCGGTTACGCCCCGGACGCGGAAACCACC CCGTCGTCCGCGGGGGCAGTCGATGAAGCGATCTCCGGAGAAGAGTGGGA GGAGGAGGGCGTTTCGTCGGATGGGAAGTCGGCGGAAGCAGCGGCGGTGG TTGCGACAGTGAGCGGAGCCGGCGGCAGCTGCAGCGGTAGGCACGCTGTT GCTCCGTCCGCCGAGGAGGAGGAAGCGCAGGACGGCACTGAGCATGCTGC TGCTGCTGCTGCTGCCGCTGCCGTTGCCGCTGCCGCTGGAAATGCGTCCG CTACTGCTGCCGCCGCCGCGGCTGCCGCCGCTACCGCCGCCGCCGCTGCG GCTGCTGCTGCTGCCGCTGAGTGTGCTGCCGCTGCTGCTGAAAGTGCCGC CGTTGTGGACAACGCCGTCCGCGAAACCCTGGAGAACCTGACCGCCGGCG TGGCGATCCTCGTCGGCGACGAGCAGTTCCTCAGCTGCTCCGAGGTGCTC TCGGAGCTCCAGTCCGACGCGGGAGACGACCACGGCGGCAAGGCGGCTGG AGGCGCCGGCGGGGGTGCCGTGGAAGAGGAGGAGCAGGAGCAGGAGGGGG GTATTCCGTTGCTGGCGGGTGCACGGGCTGGAGAGAGTCTTCAGACCGGT GAGTCGGGATGGACGAAAGGAGGCGTTTTTTAATTCGTGGCTTTTGAGGA AAGCGGCAAATGGTAGGTTGTGTTATGTTTGTGAAAACAAGTATACACAT GTTGTGTGCGCTTTTCAGTTGTTTTTTTGCAAAAAAAAAAACTTTAGCAA ATAAAAATGGAGGGGCTGGGGTTGCGCGGCGAGCGTTTTTGGGCTCGCCG TTTTGTTTTGCTTCTTTGCTCCTCCCTTTTGTGCCACATTAGTCCGAAAC TAATAATGGGGGCACACTCGACGCCGCCGAACAAAAGCTTAACGTGATGC TCGCTTTACCCGTTCCGTTGTCTTGTGTTTGGTTCACCTACGTAAGTAGT ACTGCTGTAGTACAACCGTAATGATGCGAAGGTTGGGTTCGCACCCCCGT GTTAGCGTTTTTCTATAGCGTATTTTTCCACAACCAGGAGGGTACCACTG CCGAAAAGGGTGGTTTTCGAAACGTTTCGTCGGGGGCTTTCCAGAGAGGC ATCAGTTAGTGTTCGCACCCTCCTGGTTGTGGAGAAATACGCTATAGAAA AACGCTTCCACGGGGGTGCGAACCTTCGCGTGATTACGGTACATGCCCCC CCTTTTTCTCACACACCATTGCTTGACTTCTTTGCGGGCACCGTCCGCTC CGGTCCCCAGAAAAATGCAAAGAGGCATGTATATATGTGTATGTAATGTA GAAAACAAGTACCATACCATACACTTTAACTTACTTGGCTTCTCCGGCTG CCCCGACCTACGTGATGTGTGTGCAGTGGCCGGATCGGCGCCACACAAGC GCCTCAAGATAGCGGTGGGGCCCGACATGCAGGAGGAGGAACCTCCCGTT CCGCGGCTGCAGTGGGGAGTGAACAGCGTGCTTATGGACAGCCCCTTGAC CCCGTCCCGGTACGTCCCATCCTCGCTGCTGTCTTGGCATTATTTAAAGC CGTTCCGATCTCTGCTATCCGTACCTCCATGAGTCCGTGTGTATGTATGG TACTAACTACATATTCCAACGCTGACGCCCATAGGTTCCCGTGGTCACAG CATAAGTTGCCCTATAAAAAAGGGCATGCTGGCATCTCGTGTTTGCTTTT ACAGCGCGACCCCGGTATTTTTTGTTGTTGTTGCAAGCTGCACTGGTTTG TGTGTGTGTGCGTGTGTGTGTTGACTGCTTGTGCTTGGGCCCATGGTGGG TCTGTGTGTGTTGTTGTTGTTGTTGTTCCACATTAGCTCGTATAATCGAG ACTGCTAGTTCCAAAAAATCTAGCAACTCACGGCCCGTGGTTACAGAAAT GCTAGAGCCATCAGAAGATCCGAAAAGGACATACGCAGATCCACCGGGCA AGGGTACACAAGGCCGAGGAGGTACACCCTATGATTATTCCGGTAAAAAA GAAAACAGATATCCTACTGAACCACGCATCCACGAATGAATTTGTGTGTG CGTGTGTGTGTTGACTGCTTGTGCTTGGGCTCATACGGTCTACTGCTGTC AGCACGAAGGCGGGTTGCTTGTGTTTTGGGGGTTCGCGCCTCTGAGGCCA GGAGGCGTGCTTGTGGTGCGCTTACTGGGCGCTACCTATGGAATGTCGTT GACAGTCCCGTGGCAGTCCCAGGTTGGTTTTGCTGTACACTGCGCACGTG CATACAAACGTGTGTTTTTTTCGTTTTTTTTCATGCCCCACTCGTTTGCC TGTTGTATTACCCCGCCCTTGTAACCTGGACCCATTGGCAACCTGCCTGT ACATATCAAACGAACACACAGCTACGATAGCGGCGACGGCAGTCGGTCGC CTTCGGCGTGCTCGGTCTCCCCGTGCCGCCTGGCATCTACTAGCTTGCTC CTCCAAGAGACGGCGGAGGACGGCGAAGGCCTAGGTGGAGGGCCTCTCGC CATCGAGGTCGAGGTTGAAGGGGATGACGGCGATGCTGCCGACGACGACG ACAACGCGGTCGAGGAGGCCCGTGATTCGTCATCGTGGGAGGAGGGGGCT CCGCAAGCGTTTATGGGCCCGCTCTCGCCCCTCAGGTGACTTTCTTGAGA ATGATGGTTTTGTGCTTCGGCTTCAGTAGTTTTGGCGCCCCCCCTCCCAA TACATCCGAGAGGCGGAGGGGGTGTCCAATACGTAGGTACCGTAGGTGAC ACAAGATACCACACCCCCTGGACCGACTTTTAGAGCTCTGTTACTCCGTA ACGAAGAGGGTTCCAGCACCCAACTACACTTTTTTGGACAGCCTTTGACT AGGTCTTTCCAACGCCACCCCCTTCGGCACTGGTACTCTTCTTGCTGGAG GAGGAATCAAGCTTTGAAAATATGTCCAGGGTGTGTGATATCTGGTGTCA CCTACGGTTGCATGTACAATGAGTGACTGGCCGGTCTGCGGAGTGGTCAC ATGAGCTGGGGATATCCTCTTTCGAGTGCCGCTGCTGCTCGTGGCGCAGT AGTCTACGCGGGGTTTTTGTCTTAAGCTAACATATGGGATAAAGTATGGA AACCGCAGCACTGGAGTCAAGTGTCATATACACCAGTAGCTCGGTACAGC GACCTAGGCCTAAACCCGACACACCAACCTAGCCTGGTGTGTGGATGTGG GTTAGGGTTAAGGGTGGTTAGGGTGCGTGTTAGGCCGACCGCCGTGATGA ACCAAAAGGCCGGAAACCTAGCGTAGGCCTAGGTTTTTCGCGTCTACCTC CAACTGAAACCTAGGTTTATTACTCCGCTGGTGTAAAAGCAAAACACCAG GGCTTGTGTATGGACGCCGGCTGGTATGGAAACCGTTTGGGGGGGTCGGT GGTTGGGGTGGGGTTAGAGTTAGTAGTATAAATTTAATTTCTGCGTAGGC GGTCCTCGTGGCGGCGGATTTCCGTGACCGAGCGAAAAGAGCGAACGATA ACTTTCGGACAACGTTGCATGGTGGTGCTTAGCACCCGACGGATGGCTGG ATTGGTTGCTGTTAATGGTTCGGCAAGGCAGCCACGCTTGTGGTTGTTGT TGTTGTTGTTGTTTCTTCACATTCAAAACCGTTCCGATCTCTCCACCCAG TACCTCCTTATGGGCGTACACTATTCCAACACTTGATGCGGTCAATCCCC GATGTCACAGACTGACTATGTGTGTAAAGTAGTGGTAGTACCTAAAAATG GTCTACGAAAATCAAATGGGCCCGAAGTTTGCGAGGTCGATTTTTGCGCC TTTTTCTATGACCATACAAGCATTTAGCCCTGATTATTGATTGCTCCAGC TATAAGAGACACCGACCTGTGTCGGTAATGTTCTTGAAGCTTACGGTTGT CGTATCTCCTGTCTTTGAGTTGTATGTAGCCATGTAAATGGTACTTTACT CGTGTCGACTGTTTCGCTGAGAGCGGGGTGTGGCTCCCGGCCTGTTGTTT TCGACAAGTTACGCCGCTCCATCGCCGTCGCTTTTTTTTTTCTAACGCAC CGTTCTCTCGGCCGTTTCGATGCCCCGTGCCGCGATCGCCGCTGCCGCCG CCGCCGGAACAGCATCGCGTCTTCGCCCGAGTTCCTGGGGGCGTCGGAGC CGAGCAAGCAAAACGGTTGGGGAGGGCGGCTGAGCGTGGTTTCGGAGGGC CATGAATCTCGGGCGTCCGCTGGGTCGGCGGGCGACGGCGGCGACGTCAA CGGCGACGGCGGCGGCGATGACGGCACGGCTAGCCTGATGAAGAAGGCCC GCTGCATGACGGGCGGTACCGAGGAGACCGCCTCGCCGCCCTCCAGGCGC GTCTCCACGGAGTTCTTGCCGCCCGCGGACGCCACGGCGGCCGCCGGCGA CGGCGCGGCGGAGCCTGGGCAAGACGGCGGCGCTGGTGCTGCCGCCGGTG CTGCCGACGACAAGCGCTCGCCGTCGCAGGAAGAGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig9924:554..5789-

>mRNA_L-elsbetiae_contig9924.18862.1 ID=mRNA_L-elsbetiae_contig9924.18862.1|Name=mRNA_L-elsbetiae_contig9924.18862.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4236bp|location=Sequence derived from alignment at L-elsbetiae_contig9924:554..5789- (Laminarionema elsbetiae ELsaHSoW15)
GGCGGCGCCGGGGCGTGGGCTCTCGATACCAGCTGCGAAGACCCAGAGGA
AGAGGGCCACGAGCAAGTCGGACGGGTGTCTACGGCGGCTCCCCCTGACG
GCGATCAGGCGAGGGCAGAACGCCTGTCGGGGGTGAGCGTCATCGGGCCC
GGCACTCTCTCGGACGAAGGCGAAGAGGGAGAGGAGGAGGAGGAGGAGAC
GGAGGGCTTCTTCATGCCGATGGCGGATCTTGGAGGGCAGGGCAATGGAT
GCTGCCCCGCCGGCCAGGGCGGAGAGCACGCCCCCTCGCCGGAGCCAGCG
GCCGTTGCCGCACCCGTGTCTGCACAAGAAGAGGAGGGCCCGCCGCTGCT
CCCAGGGGCCGAGGTTGTTGAGCCGGAGGCGGCGGCGGCGGTGGGCGGCG
TACCGCTGCCGGCGGAGGAGGAGGGTGGTGGTGGTGGCGAGGTGGACGAG
GCCGCAGACCGAAACAGCGAACTGATGGACGAGATCGCGAGGATGGACGA
GGAGAGCATCCTTCTGGAGGCCGAGAGCGACCTGATGGCCATCACGATCG
ACAGCAGCGACGACGGTGATGCCGCCGCCGCCGCCGACGACGACGACAGT
GACGACCCAGGCGATGACGACCACCGTGGTGCCGAGGCCTCGTCCTCCAC
CCAGGACGAGAAGGAGGTCGAAGCCGAAGGCGCCGGTCCGGCTGATGGTT
CGCGAGCGTCGTTGGACGACAGCGGTTACGCCCCGGACGCGGAAACCACC
CCGTCGTCCGCGGGGGCAGTCGATGAAGCGATCTCCGGAGAAGAGTGGGA
GGAGGAGGGCGTTTCGTCGGATGGGAAGTCGGCGGAAGCAGCGGCGGTGG
TTGCGACAGTGAGCGGAGCCGGCGGCAGCTGCAGCGGTAGGCACGCTGTT
GCTCCGTCCGCCGAGGAGGAGGAAGCGCAGGACGGCACTGAGCATGCTGC
TGCTGCTGCTGCTGCCGCTGCCGTTGCCGCTGCCGCTGGAAATGCGTCCG
CTACTGCTGCCGCCGCCGCGGCTGCCGCCGCTACCGCCGCCGCCGCTGCG
GCTGCTGCTGCTGCCGCTGAGTGTGCTGCCGCTGCTGCTGAAAGTGCCGC
CGTTGTGGACAACGCCGTCCGCGAAACCCTGGAGAACCTGACCGCCGGCG
TGGCGATCCTCGTCGGCGACGAGCAGTTCCTCAGCTGCTCCGAGGTGCTC
TCGGAGCTCCAGTCCGACGCGGGAGACGACCACGGCGGCAAGGCGGCTGG
AGGCGCCGGCGGGGGTGCCGTGGAAGAGGAGGAGCAGGAGCAGGAGGGGG
GTATTCCGTTGCTGGCGGGTGCACGGGCTGGAGAGAGTCTTCAGACCGGG
CGGCGCCGGGGCGTGGGCTCTCGATACCAGCTGCGAAGACCCAGAGGAAG
AGGGCCACGAGCAAGTCGGACGGGTGTCTACGGCGGCTCCCCCTGACGGC
GATCAGGCGAGGGCAGAACGCCTGTCGGGGGTGAGCGTCATCGGGCCCGG
CACTCTCTCGGACGAAGGCGAAGAGGGAGAGGAGGAGGAGGAGGAGACGG
AGGGCTTCTTCATGCCGATGGCGGATCTTGGAGGGCAGGGCAATGGATGC
TGCCCCGCCGGCCAGGGCGGAGAGCACGCCCCCTCGCCGGAGCCAGCGGC
CGTTGCCGCACCCGTGTCTGCACAAGAAGAGGAGGGCCCGCCGCTGCTCC
CAGGGGCCGAGGTTGTTGAGCCGGAGGCGGCGGCGGCGGTGGGCGGCGTA
CCGCTGCCGGCGGAGGAGGAGGGTGGTGGTGGTGGCGAGGTGGACGAGGC
CGCAGACCGAAACAGCGAACTGATGGACGAGATCGCGAGGATGGACGAGG
AGAGCATCCTTCTGGAGGCCGAGAGCGACCTGATGGCCATCACGATCGAC
AGCAGCGACGACGGTGATGCCGCCGCCGCCGCCGACGACGACGACAGTGA
CGACCCAGGCGATGACGACCACCGTGGTGCCGAGGCCTCGTCCTCCACCC
AGGACGAGAAGGAGGTCGAAGCCGAAGGCGCCGGTCCGGCTGATGGTTCG
CGAGCGTCGTTGGACGACAGCGGTTACGCCCCGGACGCGGAAACCACCCC
GTCGTCCGCGGGGGCAGTCGATGAAGCGATCTCCGGAGAAGAGTGGGAGG
AGGAGGGCGTTTCGTCGGATGGGAAGTCGGCGGAAGCAGCGGCGGTGGTT
GCGACAGTGAGCGGAGCCGGCGGCAGCTGCAGCGGTAGGCACGCTGTTGC
TCCGTCCGCCGAGGAGGAGGAAGCGCAGGACGGCACTGAGCATGCTGCTG
CTGCTGCTGCTGCCGCTGCCGTTGCCGCTGCCGCTGGAAATGCGTCCGCT
ACTGCTGCCGCCGCCGCGGCTGCCGCCGCTACCGCCGCCGCCGCTGCGGC
TGCTGCTGCTGCCGCTGAGTGTGCTGCCGCTGCTGCTGAAAGTGCCGCCG
TTGTGGACAACGCCGTCCGCGAAACCCTGGAGAACCTGACCGCCGGCGTG
GCGATCCTCGTCGGCGACGAGCAGTTCCTCAGCTGCTCCGAGGTGCTCTC
GGAGCTCCAGTCCGACGCGGGAGACGACCACGGCGGCAAGGCGGCTGGAG
GCGCCGGCGGGGGTGCCGTGGAAGAGGAGGAGCAGGAGCAGGAGGGGGGT
ATTCCGTTGCTGGCGGGTGCACGGGCTGGAGAGAGTCTTCAGACCGTGGC
CGGATCGGCGCCACACAAGCGCCTCAAGATAGCGGTGGGGCCCGACATGC
AGGAGGAGGAACCTCCCGTTCCGCGGCTGCAGTGGGGAGTGAACAGCGTG
CTTATGGACAGCCCCTTGACCCCGTCCCGTGGCCGGATCGGCGCCACACA
AGCGCCTCAAGATAGCGGTGGGGCCCGACATGCAGGAGGAGGAACCTCCC
GTTCCGCGGCTGCAGTGGGGAGTGAACAGCGTGCTTATGGACAGCCCCTT
GACCCCGTCCCGCTACGATAGCGGCGACGGCAGTCGGTCGCCTTCGGCGT
GCTCGGTCTCCCCGTGCCGCCTGGCATCTACTAGCTTGCTCCTCCAAGAG
ACGGCGGAGGACGGCGAAGGCCTAGGTGGAGGGCCTCTCGCCATCGAGGT
CGAGGTTGAAGGGGATGACGGCGATGCTGCCGACGACGACGACAACGCGG
TCGAGGAGGCCCGTGATTCGTCATCGTGGGAGGAGGGGGCTCCGCAAGCG
TTTATGGGCCCGCTCTCGCCCCTCAGCTACGATAGCGGCGACGGCAGTCG
GTCGCCTTCGGCGTGCTCGGTCTCCCCGTGCCGCCTGGCATCTACTAGCT
TGCTCCTCCAAGAGACGGCGGAGGACGGCGAAGGCCTAGGTGGAGGGCCT
CTCGCCATCGAGGTCGAGGTTGAAGGGGATGACGGCGATGCTGCCGACGA
CGACGACAACGCGGTCGAGGAGGCCCGTGATTCGTCATCGTGGGAGGAGG
GGGCTCCGCAAGCGTTTATGGGCCCGCTCTCGCCCCTCAGCATCGCGTCT
TCGCCCGAGTTCCTGGGGGCGTCGGAGCCGAGCAAGCAAAACGGTTGGGG
AGGGCGGCTGAGCGTGGTTTCGGAGGGCCATGAATCTCGGGCGTCCGCTG
GGTCGGCGGGCGACGGCGGCGACGTCAACGGCGACGGCGGCGGCGATGAC
GGCACGGCTAGCCTGATGAAGAAGGCCCGCTGCATGACGGGCGGTACCGA
GGAGACCGCCTCGCCGCCCTCCAGGCGCGTCTCCACGGAGTTCTTGCCGC
CCGCGGACGCCACGGCGGCCGCCGGCGACGGCGCGGCGGAGCCTGGGCAA
GACGGCGGCGCTGGTGCTGCCGCCGGTGCTGCCGACGACAAGCGCTCGCC
GTCGCAGGAAGAGCATCGCGTCTTCGCCCGAGTTCCTGGGGGCGTCGGAG
CCGAGCAAGCAAAACGGTTGGGGAGGGCGGCTGAGCGTGGTTTCGGAGGG
CCATGAATCTCGGGCGTCCGCTGGGTCGGCGGGCGACGGCGGCGACGTCA
ACGGCGACGGCGGCGGCGATGACGGCACGGCTAGCCTGATGAAGAAGGCC
CGCTGCATGACGGGCGGTACCGAGGAGACCGCCTCGCCGCCCTCCAGGCG
CGTCTCCACGGAGTTCTTGCCGCCCGCGGACGCCACGGCGGCCGCCGGCG
ACGGCGCGGCGGAGCCTGGGCAAGACGGCGGCGCTGGTGCTGCCGCCGGT
GCTGCCGACGACAAGCGCTCGCCGTCGCAGGAAGAG
back to top