prot_L-elsbetiae_contig9891.18831.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9891.18831.1
Unique Nameprot_L-elsbetiae_contig9891.18831.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length452
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9891.18831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 407..452
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 384..406
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..78
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 198..383
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 181..197
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..112
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..180
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
NoneNo IPR availableTMHMMTMhelixcoord: 80..99
NoneNo IPR availableTMHMMTMhelixcoord: 384..406
NoneNo IPR availableTMHMMTMhelixcoord: 180..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9891contigL-elsbetiae_contig9891:95..1450 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9891.18831.1mRNA_L-elsbetiae_contig9891.18831.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9891 95..1451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9891.18831.1 ID=prot_L-elsbetiae_contig9891.18831.1|Name=mRNA_L-elsbetiae_contig9891.18831.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=452bp
LPGRCLPPQENRSPVGPTVHKSRARGRQPPRRRRRCRRSRPQQRLRFGEP
HRPRGARGHQRVPERSRGVRGDNPRGKDAAVVVLCALVGGAVHGAVLVFA
CFVVVVVVVVLAGEAAAVVVALVDRAPGGPPEGILDRDGGRHRPSSAGAA
VSVANGQRDRGPTPIADADAVVGPLLFHREVAPRTFFVFVFFILGLADDR
RRRSSRRSSSRCCCFSGRRRPGSGNRHHLPAVGPSARLQRLKAAAAGRCA
AVSIRGVGGGAARAARYRRPSQPPADPRHPAATVSGSLGDGRSRRCLRTR
NHAAAAAAAAVGAAALRPHHPSRCRLRARPFRRLLGAGLDHRDGRSEEEA
RPPVGRRSAEQKRGKLSAVGNGDRRRERRAASPLWWAAGVVATTAAAAAA
AAVFYLRASNRSSSGSSSSGVDRGGRRGGRGRRGGRGENRLQRQHDRPPL
PR
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