mRNA_L-elsbetiae_contig987.18810.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig987.18810.1
Unique Name	mRNA_L-elsbetiae_contig987.18810.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot
Match: D7FS87_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS87_ECTSI)

HSP 1 Score: 444 bits (1142), Expect = 2.630e-149
Identity = 315/463 (68.03%), Postives = 354/463 (76.46%), Query Frame = 1

Query:  181 MRRRVPPRPRLRDSKGGE------------PPQVFPVDMNLVKGILREFDRGAYGEEFRGDRLAKIAVLGKGSTSTVWKVVDVDYLRVVAVKEMVVCNSKESAILRHELSVLNPQMQRLIPPKTWRLSGRKSKSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGEASSLERPGKCAYMPCYYGSFVSQDDAGRPCVSIVLEHVSGVDLAKWTEEMGGTSSGAARGGRWPVSQAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVWLARVCRDMLEALRYLHERRRIHRDVKPGNLLLGPEGARLVDFGSTIGEEEGE-GDRMHGTVRFMSPERLCAKPYRPSSDLWAAALTVASAALGENPIPHSHNEFENAEYAEAAFRLVREHPASSGLSPRLLNFLKAALESDPDKRPTVEQMLAHPFV 1530
            MRR   P  R R++K G             PPQ +P+D+N VKGILREFDR AYGE FRGDRLAKIA LG+GSTSTVWKVVD++ LRVVAVKEM+VC+SK+  ILRHELSVL+PQ+Q L+PPK  RLSGR+S+++A              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       + RPG C YMP YYGSFVS DD GRP VSIV+E+VSGVDLA+W EE+GG SSG   G R                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXX     E+WL RVCRDMLEALRYLHER  IHRDVKP N+LLGP GARLVDFGSTI + E E G RMHGTVRFMSPERLCA+PYRPSSDLWAA LTVASAALGENP+PHS N+FE A +AE AF +VR HPAS+GLSP LL+FL+A L +DP++RPTVEQMLAHP++
Sbjct:    1 MRRVAMPLRRQREAKLGXXXXXXXXXXXXGPPQAYPMDLNTVKGILREFDRAAYGEAFRGDRLAKIAFLGRGSTSTVWKVVDIETLRVVAVKEMIVCDSKQGTILRHELSVLHPQLQPLVPPKPKRLSGRRSRASAAPVGDAASSGTNTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------PVVRPGPCPYMPRYYGSFVSHDDGGRPRVSIVMEYVSGVDLARWIEEVGG-SSGEGEGRR-----------------EGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPIPEMWLPRVCRDMLEALRYLHERGFIHRDVKPANVLLGPGGARLVDFGSTIDDREDECGGRMHGTVRFMSPERLCARPYRPSSDLWAAGLTVASAALGENPVPHSANKFEAAGHAEVAFEMVRSHPASAGLSPSLLDFLRAVLVADPERRPTVEQMLAHPYL 439

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BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot
Match: A0A6H5K7A9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7A9_9PHAE)

HSP 1 Score: 442 bits (1136), Expect = 4.790e-142
Identity = 277/433 (63.97%), Postives = 317/433 (73.21%), Query Frame = 1

Query:  235 PPQVFPVDMNLVKGILREFDRGAYGEEFRGDRLAKIAVLGKGSTSTVWKVVDVDYLRVVAVKEMVVCNSKESAILRHELSVLNPQMQRLIPPKTWRLSGRKSKSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGGEASSLERPGKCAYMPCYYGSFVSQDDAGRPCVSIVLEHVSGVDLAKWTEEMGGTSSGAARGGRWPVSQAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVWLARVCRDMLEALRYLHERRRIHRDVKPGNLLLGPEGARLVDFGSTI-GEEEGEGDRMHGTVRFMSPERLCAKPYRPSSDLWAAALTVASAALGENPIPHSHNEFENAEYAEAAFRLVREHPASSGLSPRLLNFLKAALESDPDKRPTVEQMLAHPFV 1530
            PPQV+P+D+N VKGILREFDR AYGE FRGDRLAKIAVLG+GS+STVWKVVD++ LRVVAVKEM+VC+SK+  ILRHELSVL+PQ+Q L+PPK  RLSGR+S+++A                      XXXXXXXX                      ++ + RPG C YMP YYGSFVS DD GRP VSIV+E+VSGVDLA+W EE+GG SSG   G R                       XXXXXXXXXXXXXXXXXXXXXXXXX     E+WL+RVCRD+LEALRYLHER  IHRDVKP N+LLGP GARLVDFGSTI G E+  G RMHGTVRFMSPERLCA+PY PSSDLWAA LTVASAALGENP+PHS  +FE A +AE AF +VR HPAS+GLSP LL+FL+A L +DP++RPTVEQMLAHPFV
Sbjct:   32 PPQVYPMDLNTVKGILREFDRAAYGEAFRGDRLAKIAVLGRGSSSTVWKVVDIETLRVVAVKEMIVCDSKQGTILRHELSVLHPQLQPLVPPKPKRLSGRRSRASAAPISGAGAGDAASSGTNTPTIAXXXXXXXXSARRSGKKSLGGGKSVAA-ASTSAPVVRPGPCPYMPRYYGSFVSHDDGGRPRVSIVMEYVSGVDLARWIEEVGG-SSGDGEGRR----------------------EXXXXXXXXXXXXXXXXXXXXXXXXXRPPIPELWLSRVCRDILEALRYLHERGFIHRDVKPANVLLGPGGARLVDFGSTIDGREDECGGRMHGTVRFMSPERLCARPYWPSSDLWAAGLTVASAALGENPVPHSATKFEAAGHAEVAFEMVRSHPASAGLSPSLLDFLRAVLVADPERRPTVEQMLAHPFV 440

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BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot
Match: A0A7S1TZN7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZN7_9STRA)

HSP 1 Score: 107 bits (268), Expect = 2.470e-22
Identity = 62/162 (38.27%), Postives = 91/162 (56.17%), Query Frame = 1

Query: 1063 LARVCRDMLEALRYLHERRRIHRDVKPGNLLLGPEG-ARLVDFGST--IGEEEGEGDRMHGTVRFMSPERLCAKPYRPSSDLWAAALTVASAALGENPIPHSHNEFENAEYAEAAFRLVREHPA---SSGLSPRLLNFLKAALESDPDKRPTVEQMLAHPFV 1530
            LA +   +L  L +LH RRR+HRD+KP NLL+   G  +  DFG    +     + +   GT  +MSPER+  +PY  SSD+WA  LT+ + ALG    P+S    +  +Y  +    +R+ PA    +G S    +FL A LE DPD+RP+ + +L HPF+
Sbjct:   58 LANISYQVLRGLAFLHSRRRMHRDIKPSNLLINHTGEVKFCDFGLARDLDHTLAQAETFVGTYPYMSPERISGQPYTTSSDIWAFGLTMMTLALGR--FPYSGQATDVHDYW-SMLHALRDAPAPELGAGFSSSFASFLAACLEKDPDRRPSADALLEHPFL 216

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BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot
Match: A0A835YL65_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL65_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.090e-20
Identity = 63/163 (38.65%), Postives = 90/163 (55.21%), Query Frame = 1

Query: 1063 LARVCRDMLEALRYLHERRRIHRDVKPGNLLLGPEGA-RLVDFG-----STIGEEEGEGDRMHGTVRFMSPERLCAKPYRPSSDLWAAALTVASAALGENPIPHSHNEFENAEYAEAAFRLVREHPASS-GLSPRLLNFLKAALESDPDKRPTVEQMLAHPFV 1530
            LA V RD L  L  +H    +HRD+KP N+LL   GA +L DFG     +    E        GT  +MSPERL  + Y  SSD+W+  L++ + ALG  P+        N   +   + L++  P ++ G+SP L +FL+  L  DP +RP+VEQ+LAHPF+
Sbjct:  129 LASVARDALRGLASIHRLGLLHRDIKPSNMLLDARGAVKLADFGLVREAAAADLEAATAHTFVGTAVYMSPERLRGEEYSFSSDVWSLGLSLLTLALGRFPL--------NVPKSNLYWHLMKALPENAAGMSPCLRDFLRGTLHRDPARRPSVEQLLAHPFL 283

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BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot
Match: A0A2V0PIH6_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PIH6_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 3.880e-19
Identity = 57/162 (35.19%), Postives = 90/162 (55.56%), Query Frame = 1

Query: 1063 LARVCRDMLEALRYLHERRRIHRDVKPGNLLLGPEG-ARLVDFGST--IGEEEGEGDRMHGTVRFMSPERLCAKPYRPSSDLWAAALTVASAALGENPIPHSHNEFENAEYAEAAFRLVREHP---ASSGLSPRLLNFLKAALESDPDKRPTVEQMLAHPFV 1530
            L+R+   +L+ L +LH R  +HRD+KP N+LL  +G A++ DFG +  + +     +   GTV +MSPER+  +PY   +D+W+  L +  AA G  P            Y      ++ + P   A   +S  L +F++A L +DP +RP+ EQ+LAHPFV
Sbjct:  212 LSRITARVLQGLAFLHRRHLVHRDIKPANILLNLQGEAKISDFGISAFVADTVANCNTFTGTVTYMSPERIEGRPYGFPADIWSLGLVLVEAATGRYP------------YDATGGPILHDEPPLPAPGSVSDALRDFVRACLATDPKRRPSAEQLLAHPFV 361

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BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot
Match: A0A4D9DG65_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DG65_9STRA)

HSP 1 Score: 101 bits (252), Expect = 5.850e-19
Identity = 64/168 (38.10%), Postives = 91/168 (54.17%), Query Frame = 1

Query: 1054 EVWLARVCRDMLEALRYLHERRRIHRDVKPGNLLLGPEGA-RLVDFGSTIGEEEGEGDRMH---GTVRFMSPERLCAKPYRPSSDLWAAALTVASAALGENPIPH-----SHNEFENAEYAEAAFRLVREHPASSGLSPRLLNFLKAALESDPDKRPTVEQMLAHPFV 1530
            E  LA + R++L  L YLHER++IHRD+KPGNLL+  +G  ++ DFG +     G  D      GTV +MSPER+    Y   +D+W+  L++ + ALG  P        S+ E  NA   E +  L    P     SP   +FL+  L  DP +RP+ E +L HP+V
Sbjct:  594 EAVLANMARNILVGLNYLHERQKIHRDIKPGNLLMNTKGVVKIADFGVSR-NLTGTSDLSKTFVGTVGYMSPERIQGHKYNAKADVWSFGLSLLACALGAFPFERQVSSLSYFELVNAVCDEPSPELP---PGDRRFSPEFRDFLRLCLLKDPSERPSAETLLFHPYV 757

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BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot
Match: A0A7S1G6G9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6G9_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.420e-18
Identity = 60/163 (36.81%), Postives = 85/163 (52.15%), Query Frame = 1

Query: 1063 LARVCRDMLEALRYLHERRRIHRDVKPGNLLLGPEG-ARLVDFG--STIGEEEGEGDRMHGTVRFMSPERLCAKPYRPSSDLWAAALTVASAALGENPIPHSHNEFENAEYAEAAFRLVREHPA----SSGLSPRLLNFLKAALESDPDKRPTVEQMLAHPFV 1530
            +A VC  ML  L YLH    IHRDVK GN+LL PEG A++ DFG  + +         + GT  +M+PE +    Y   +D+W+  +T+   A GE P  H H          A F +    P     ++  SP + +F+K  L+ DP  RPTV+++L HPFV
Sbjct:  100 IADVCASMLLGLSYLHREHLIHRDVKAGNVLLSPEGNAKMADFGVSAQLNNTMSRRRTVIGTPFWMAPEVIQETSYDGKADVWSLGITIIEMAEGEPPNSHIHP-------MRAIFLIPTLPPPKLADAAKWSPHMQDFVKLCLQKDPADRPTVDELLKHPFV 255

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BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot
Match: A0A0H5QLB2_9EUKA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QLB2_9EUKA)

HSP 1 Score: 97.4 bits (241), Expect = 2.060e-18
Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = 1

Query: 1063 LARVCRDMLEALRYLHERRRIHRDVKPGNLLLGPEG-ARLVDFGSTIGEEEG--EGDRMHGTVRFMSPERLCAKPYRPSSDLWAAALTVASAALGENPIPHSHNEFENAEYAEAAFRLVREHPA----SSGLSPRLLNFLKAALESDPDKRPTVEQMLAHPFV 1530
            L R+ +  L  LR++H RR++HRD+KPGN+LL   G A+L DFG  + E +         GT  +MSPER+ ++PY  S+D+W+  LT+A+ A G  P   +H  F +       F+ +   P      S  S  L NF+   L  DP++R T E++L HP++
Sbjct:  158 LQRIAKQTLFGLRHMHLRRKVHRDIKPGNILLNSAGEAKLADFG-IVKELDAINNAQTFVGTQIYMSPERIQSQPYGCSADIWSFGLTLATCASGRFPYDDAHKGFIH------VFQSITMDPPPVLPKSRSSVGLRNFVSKCLIKDPEQRWTAERLLTHPWL 313

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BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot
Match: W7U1J4_9STRA (Mitogen-activated protein kinase kinase 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U1J4_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.900e-18
Identity = 63/168 (37.50%), Postives = 91/168 (54.17%), Query Frame = 1

Query: 1054 EVWLARVCRDMLEALRYLHERRRIHRDVKPGNLLLGPEGA-RLVDFGSTIGEEEGEGDRMH---GTVRFMSPERLCAKPYRPSSDLWAAALTVASAALGENPIPH-----SHNEFENAEYAEAAFRLVREHPASSGLSPRLLNFLKAALESDPDKRPTVEQMLAHPFV 1530
            E  LA + R++L  L YLHER++IHRD+KPGNLL+  +G  ++ DFG +     G  D      GTV +MSPER+    Y   +D+W+  L++ + ALG  P        S+ E  NA   E +  L    P     SP   +FL+  L  +P +RP+ E +L HP+V
Sbjct:  865 EAVLANMARNILVGLNYLHERQKIHRDIKPGNLLMNTKGVVKIADFGVSR-NLTGTSDLSKTFVGTVGYMSPERIQGHKYNAKADVWSFGLSLLACALGAFPYERQVSSLSYFELVNAVCDEPSPELP---PGDRRFSPEFRDFLRLCLLKNPSERPSAENLLFHPYV 1028

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BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot
Match: A0A7S2GGA6_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2GGA6_9EUKA)

HSP 1 Score: 96.3 bits (238), Expect = 4.040e-18
Identity = 57/165 (34.55%), Postives = 90/165 (54.55%), Query Frame = 1

Query: 1054 EVWLARVCRDMLEALRYLH-ERRRIHRDVKPGNLLLGPEG-ARLVDFG--STIGEEEGEGDRMHGTVRFMSPERLCAKPYRPSSDLWAAALTVASAALGENPIPHSHNEFENAEYAEAAFRLVREHPAS--SGLSPRLLNFLKAALESDPDKRPTVEQMLAHPFV 1530
            E+ L ++    LE L YLH ER ++HRD+KPGN+LL   G  ++ DFG  + +   +       GT  +MSPERL  KPY  +SD+W+  +T+   ALG+ P    +  +  + Y     +++ + P       S    +F+   L  DP++RPT +Q+L HPF+
Sbjct:  158 EMVLGKLAARTLEGLNYLHRERHQVHRDIKPGNILLNSRGEVKISDFGLSAELDSTKEMCATFIGTHAYMSPERLGGKPYGFASDIWSLGITLVECALGQFP----YTAYTGSNYFVLLSQILNDPPPQLPETFSGEFRDFVLQCLCKDPEQRPTAQQLLQHPFI 318

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig987.18810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FS87_ECTSI	2.630e-149	68.03	Protein kinase domain-containing protein n=1 Tax=E...	[more]
A0A6H5K7A9_9PHAE	4.790e-142	63.97	Protein kinase domain-containing protein n=1 Tax=E...	[more]
A0A7S1TZN7_9STRA	2.470e-22	38.27	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A835YL65_9STRA	1.090e-20	38.65	Kinase-like domain-containing protein (Fragment) n...	[more]
A0A2V0PIH6_9CHLO	3.880e-19	35.19	Uncharacterized protein n=1 Tax=Raphidocelis subca...	[more]
A0A4D9DG65_9STRA	5.850e-19	38.10	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]
A0A7S1G6G9_9STRA	1.420e-18	36.81	Hypothetical protein (Fragment) n=1 Tax=Bicosoecid...	[more]
A0A0H5QLB2_9EUKA	2.060e-18	36.81	Protein kinase domain-containing protein (Fragment...	[more]
W7U1J4_9STRA	2.900e-18	37.50	Mitogen-activated protein kinase kinase 2 n=2 Tax=...	[more]
A0A7S2GGA6_9EUKA	4.040e-18	34.55	Hypothetical protein n=1 Tax=Haptolina brevifila T...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig987	contig	L-elsbetiae_contig987:4997..10044 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	446.8
Seed ortholog evalue	1.3e-122
Seed eggNOG ortholog	2880.D7FS87
Hectar predicted targeting category	other localisation
EggNOG free text desc.	MAP kinase kinase activity
EggNOG OGs	KOG0581@1,KOG0581@2759
COG Functional cat.	G
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Ec32 ortholog description	Serine/threonine/dual specificity protein kinase, catalytic domain
Ec32 ortholog	Ec-05_004950.1
Exons	3
Model size	1530
Cds size	1530
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig987.18810.1	prot_L-elsbetiae_contig987.18810.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig987 4997..10044 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817047.2197287-CDS-L-elsbetiae_contig987:4996..5820	1622817047.2197287-CDS-L-elsbetiae_contig987:4996..5820	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig987 4997..5820 -
1691684007.3267443-CDS-L-elsbetiae_contig987:4996..5820	1691684007.3267443-CDS-L-elsbetiae_contig987:4996..5820	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig987 4997..5820 -
1622817047.2322628-CDS-L-elsbetiae_contig987:5895..6243	1622817047.2322628-CDS-L-elsbetiae_contig987:5895..6243	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig987 5896..6243 -
1691684007.345178-CDS-L-elsbetiae_contig987:5895..6243	1691684007.345178-CDS-L-elsbetiae_contig987:5895..6243	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig987 5896..6243 -
1622817047.2466285-CDS-L-elsbetiae_contig987:9686..10044	1622817047.2466285-CDS-L-elsbetiae_contig987:9686..10044	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig987 9687..10044 -
1691684007.356797-CDS-L-elsbetiae_contig987:9686..10044	1691684007.356797-CDS-L-elsbetiae_contig987:9686..10044	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig987 9687..10044 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig987:4997..10044-
coding sequence from alignment at L-elsbetiae_contig987:4997..10044-

protein sequence of mRNA_L-elsbetiae_contig987.18810.1

>prot_L-elsbetiae_contig987.18810.1 ID=prot_L-elsbetiae_contig987.18810.1|Name=mRNA_L-elsbetiae_contig987.18810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=510bp
QREWAGDCETSQARPRAREGEETTSLRLSVATDTPSVAISTFNITSLVCF
FRFFRDPDHQMRRRVPPRPRLRDSKGGEPPQVFPVDMNLVKGILREFDRG
AYGEEFRGDRLAKIAVLGKGSTSTVWKVVDVDYLRVVAVKEMVVCNSKES
AILRHELSVLNPQMQRLIPPKTWRLSGRKSKSAAVAAAAVSRMNGNSPAT
TAATAAAAAADGSTSTSTSTSQRKNNGGRGGGWGGEASSLERPGKCAYMP
CYYGSFVSQDDAGRPCVSIVLEHVSGVDLAKWTEEMGGTSSGAARGGRWP
VSQAAAATAGGTGTGAGAGAGTGTMLTPTARRASAQPTPPRARPPPRPPE
PEVWLARVCRDMLEALRYLHERRRIHRDVKPGNLLLGPEGARLVDFGSTI
GEEEGEGDRMHGTVRFMSPERLCAKPYRPSSDLWAAALTVASAALGENPI
PHSHNEFENAEYAEAAFRLVREHPASSGLSPRLLNFLKAALESDPDKRPT
VEQMLAHPFV

mRNA from alignment at L-elsbetiae_contig987:4997..10044-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig987.18810.1 ID=mRNA_L-elsbetiae_contig987.18810.1|Name=mRNA_L-elsbetiae_contig987.18810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5048bp|location=Sequence derived from alignment at L-elsbetiae_contig987:4997..10044- (Laminarionema elsbetiae ELsaHSoW15)
CAGAGAGAGTGGGCGGGCGATTGCGAGACCAGCCAAGCAAGGCCCCGGGC
CCGGGAGGGAGAAGAGACCACTTCCCTTAGGTTGTCTGTTGCAACAGATA
CCCCGTCCGTTGCCATCAGCACATTCAACATCACATCACTGGTGTGTTTT
TTTCGATTTTTTCGAGACCCGGATCATCAGATGCGACGACGAGTGCCCCC
TCGACCACGCCTGCGGGACTCAAAGGGCGGAGAACCGCCGCAGGTGTTCC
CCGTGGACATGAACCTGGTGAAGGGGATTCTGCGAGAGTTCGATCGCGGA
GCGTACGGGGAGGAGTTCAGAGGAGACCGGTTGGCGAAGATAGCTGTCCT
TGGCAAAGGTGGGTCATTTTCGTGCTGCTGTTGGTGGGTTGGGTTTTGGG
GGTCGCATCTCCTTTTCCTCACGGCGATGGAGAAGTGGGCACATCATGGG
TTCCGTGCCTAGCTAGCATCCTCGCTGCTGTCTCGCTCGCTCGTGTGTGT
TGTCGTTGCCTCTCCGGTCGGGTGTAGGTGTTTTTTTTTACCATCCTATT
TAAGTTTTGTTTTTATGGGCAAACTATTTGATACGCGGGCAGGCCGCGTC
ACATTGATTGACCTCTTGGGCCCTTTTAATATATACGTTTTACTGTACAT
GTACACGCCGTTTGGGACACTGGAGACCTCCTCGTGATAGCATGTCCATT
TTTGAAATGGTGATGGCATCGTACTGTTTAGTTTGTACATGCATCCCCTC
TTCTCTTCTCGTATCGCCCGAAAGCCCGGCCCATAAGGTTCGGTACAATC
ATCCCCGCTTCTCTCCGTGCATCAACAAGTATTGTGTATCTCTACTACAA
TATTCCACGATGCCACCTCTCTCTTCTCTATCTCTCTTTCCCCTCTCTTG
CGTAGCTCCCCGCGAATAGTAGCACGTGCGTTCATGCATAGACACAGCAC
GCGCAGGCGCTGCTCCCTTCGTGTTCACGGCTAGCGCACCGCGGGTGTGT
GTCTGCGCGCGGCCGCGGGTTTGAAGATATATGATATATGTTGGTTGCCT
TCTGGCTCTGTTTATATTCCTTTGATTTTCACCCAGCTTTCTTTTTCGCT
TTATGGAGGTTTCTCCGCTCGCTCTCTGTGAACGACAGGCCCTGACACAC
ACACGCCTTCCGAAAATCCCGACACAAATAGTAGCCCAAGGGGTCACAGG
CCGGCTTTGAGCCCCTCTCCTCCCCCGCGCTGCCTCTACCGGGTGTGCCA
GTCGCTTCGTATTCGTTGCGTTGGTGTGTGCATGCAAAATCATGACATGA
CGTTTAAGTTCAAGTTTTGCACTGCGCTTTGTGGTGGTCACCACACCCCT
CTATAGCTGAGAGCTGAGAGTAGTAGCCATGTGTGTGTTGATGCTGTTTT
TGTGTTTCATAGTTTTGTCGTTTCAGTCAAAGAGGCGTTGTTGGTTTTTA
GTTTCGTCACATCTTCGCTCGCACCACGTATACACGCGGCAGGGGGAGAA
CGTTGGTGGAGATGCTCGTTAAAATGGATATATATTTATATGGCAATTGT
AATCAGTAATTGCAAGACTTTTGTTACTACAATACTGCAGAGGAACTACC
CAATCTCAGCACATACAAAAGTAGAACCTTAATTTACCTCGACAGTTTTA
TTTTAGCAGCTTTCTCGCCCTCCATACGAGTGGAGTGAGACAACGTCCTA
TTCTCTTTGGTCTCGAGTGCGGCTACACTCCCTCCCGCCGCGGAACCACC
TCGTGGCAGCAGCGCCTCTAAGCTCTTGGGAGCAGGATCAAATTCGTCTC
TGAATCGACGAGTTGCAGACCCTTCATTTTTTGTATGTATGTCGGTGCAA
GAACCTCCATATTCCGGGGTGATCCAGCCAAATATCTCTATTTACCCCCC
TACCGCGAATTCCTGTGTACTGCTGCTGCTGTTGCTGCTGCTGTTGCTGC
TGCTGTGTGGTACGTCTAGAAGACTGCAATACGAACCCAGCGACGCCCGC
GCTGCATGTGTATCTATCGTCTATTTTTCACCATCTCCCCCGATCTTGTG
CCGGTGCAACCGGGTGGACAGCAGTAGTTTCCGCGGCATGTATTGAAGTA
GTGGGTTGAGGGTGGGTTTTTCCTGTCCGAGCACGTTTGACCCGATGGAC
GACTCTGGGACTCCTCTGTGTGTCCCTCCCCGCCAGCAGAATCCGTGGGG
TACACGTGTACGCGAAGGGAACGCATACAAATATTGTACTGGCTTGTGTG
TGCCGGAAGGTTCCCAGCCTAGAAGGATGGACAAAGAGCTTGTTCCAACT
ACCAACTACCCGATGGGCGTGTGCATGTTGTTTGGATCTTGGATCTCGCA
ACAGCTATCCTATATACATACGTACCCAGCAGTTGTGCGGTTGCATGGCC
GAACCCTTCGTCACAACGGCATGCAAAATACACGAAGCGCAATCCTTTGT
ACATATGTGTATCGTATATACGAAACGGACGAGATCCGTTACATTATTTA
TATACGAAATTCCATGTCAAAACCCGGGGCAGTCAGGGTGTCATGTGCAT
GAAACGCTTCATGCGGTACACCCCGCGGTCTGGGTTCTCGTCTCGAATGC
GTTTTTTGCGTCTTTCGTTGACCCTTTCTTTGGTTGTGTACAGATGTACA
TACCATATACAAGAGCAATGCCATATACTCGTAGTATCAGATATCTCCTT
CCTTTTTACAGCAGCAGTGTTGATTGATAGATCAAGATCATGTGGCCTCG
GAGACAGACAGACAGACGCTCCTCATACAAATTATTGCGTGTATGTATTT
AGGCGGGTCCAACCCGCGTAAGCCCTTTCGACACCTCGCCCTCAATGGTT
GGTTGCCCCCCGCCTCGAAAAAAAGAACCTCGACGGTGCATCCATCCTTT
CACCCATCCCCCCCCCTCCTGCGCCCGATTTACATGACTCGTGAATCTCG
TATCCCAGGGCCCCGCTGTTGTTTCACTTGCGCGCGCGCAAGACTGGTGT
GTTTTTTATTCTTGATCGAACTGCTGAAAATGCACCGCACGTCCTCGGTT
TATGGTAGAGTTTCTGCCCTCTTTTTGTGCTGAGCGTGTGCCGGCAAGTT
TGTTTTGTCTTTGAAAATGAAACAGTTAATCAAAAATGGAACCTAACCCA
CAGAGACAGCCGACTCCCATGAGCTTCGAACGGTACTCCATATAGTGACG
TAATATTGGTCCAGCCCAGTAGAAAAATACCTACATGACGAAAAAGTCCA
TCACCTCCCCTGCATAACTCTGCCAGGTCTTTGTTTCCTGTCTCTAAATT
AGTCTAAATGCAAACAACGAACAGCCCGTGTGTCGCTTAAACATGCAACA
AAATGTAGATGAATACGTCCCCAACTAACCCCAATCGCGTATATTTTTTA
GCGCCGTACGCAACATACTGCTTCCAGTACATTTTTTTTCTTCTTCACAT
TTATTTCCAGTGCTCGATGGGCTCCATGTCACGAGGACATCTTGCCAGAG
TACTTACTGAACCGCGGTCACACAGAAGGGTTCCTTTCCCCAAGGCCCCC
ACTCCCCCCGTCTGCGGTGCTTGCCTAAGCTTTTTTGTCGCGAGAAGGGT
TCTCAGCCGTCCCTTTCCCTCGTCGATGGTGAGGTCGAAGTTTATAGGAG
TAGCACGTACATACTGGCTAGAGAGAGAGAGAGAGATCGGAACGGTTTTT
ATTTTTAAATGTGAAGACAATAATAACAAGGAACAGCATGTTTGGCCCCT
TCGCTCCCGTTGGCTGTTGTTTGGCCTCTCCGACGACCTTAATGCATCCA
GGCTCGACCAGCACGGTGTGGAAGGTGGTGGACGTGGACTATCTCCGCGT
GGTGGCGGTGAAGGAGATGGTCGTCTGCAACTCCAAGGAGAGCGCCATCC
TCCGGCACGAGCTGAGCGTGCTGAACCCGCAGATGCAGCGCCTCATCCCC
CCGAAGACGTGGCGGCTGTCCGGCCGGAAGAGCAAGTCGGCGGCGGTGGC
GGCGGCGGCGGTCAGCAGGATGAACGGGAACTCCCCGGCCACCACCGCTG
CCACCGCCGCCGCCGCTGCCGCTGACGGCAGCACCAGCACCAGCACCAGC
ACCAGCCAGAGAAAAAACAACGGCGGGCGAGGCGGGGGCTGGGGCGGCGG
TGGCGGCAAGGGCAAAGCACACGCCGGCGGCGGGGGCGGGGGTGGGGGCG
GTAGCAGCGGCAGTAGGAAGGGAGAGGCCTCTTCGCTCGAGCGGCCGGGC
AAGTGCGCGTACATGCCGTGCTACTACGGCTCCTTCGTTTCGCAGGACGA
CGCGGGGCGGCCATGCGTAAGCATCGTCCTGGAGCACGTCTCGGGGGTCG
ACCTGGCCAAGTGGACAGAGGAGATGGGTGGCACCAGCAGCGGCGCCGCT
CGAGGGGGCCGGTGGCCGGTGTCGCAAGCTGCTGCTGCTACCGCGGGGGG
GACGGGGACGGGGGCGGGGGCGGGGGCGGGGACGGGGACGATGCTGACGC
CGACGGCGCGGCGGGCGTCGGCGCAGCCGACGCCACCCCGCGCTCGGCCG
CCGCCGCGGCCGCCGGAGCCGGAGGTGTGGCTGGCGCGGGTGTGCCGCGA
CATGCTCGAGGCGCTGCGGTACCTGCACGAGCGGCGGCGCATCCACAGGG
ACGTGAAGCCGGGGAACCTGCTGCTGGGGCCGGAGGGCGCGAGGCTGGTG
GACTTCGGGAGCACCATCGGCGAGGAGGAGGGGGAGGGGGACCGGATGCA
CGGGACCGTCAGGTTCATGAGCCCCGAGCGCCTGTGCGCGAAGCCGTACC
GGCCGAGCTCGGACCTGTGGGCGGCGGCGCTGACGGTGGCGTCAGCGGCG
CTGGGAGAGAACCCGATACCGCACAGCCACAACGAGTTCGAGAACGCCGA
GTACGCGGAGGCGGCGTTCCGCCTGGTGCGCGAGCACCCGGCCTCGTCCG
GCCTGTCGCCGCGCCTGCTGAACTTCCTCAAGGCCGCGCTCGAGAGCGAC
CCGGACAAGCGGCCCACCGTCGAGCAGATGCTGGCGCACCCCTTCGTG

Coding sequence (CDS) from alignment at L-elsbetiae_contig987:4997..10044-

>mRNA_L-elsbetiae_contig987.18810.1 ID=mRNA_L-elsbetiae_contig987.18810.1|Name=mRNA_L-elsbetiae_contig987.18810.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3060bp|location=Sequence derived from alignment at L-elsbetiae_contig987:4997..10044- (Laminarionema elsbetiae ELsaHSoW15)
CAGAGAGAGTGGGCGGGCGATTGCGAGACCAGCCAAGCAAGGCCCCGGGC
CCGGGAGGGAGAAGAGACCACTTCCCTTAGGTTGTCTGTTGCAACAGATA
CCCCGTCCGTTGCCATCAGCACATTCAACATCACATCACTGGTGTGTTTT
TTTCGATTTTTTCGAGACCCGGATCATCAGATGCGACGACGAGTGCCCCC
TCGACCACGCCTGCGGGACTCAAAGGGCGGAGAACCGCCGCAGGTGTTCC
CCGTGGACATGAACCTGGTGAAGGGGATTCTGCGAGAGTTCGATCGCGGA
GCGTACGGGGAGGAGTTCAGAGGAGACCGGTTGGCGAAGATAGCTGTCCT
TGGCAAAGCAGAGAGAGTGGGCGGGCGATTGCGAGACCAGCCAAGCAAGG
CCCCGGGCCCGGGAGGGAGAAGAGACCACTTCCCTTAGGTTGTCTGTTGC
AACAGATACCCCGTCCGTTGCCATCAGCACATTCAACATCACATCACTGG
TGTGTTTTTTTCGATTTTTTCGAGACCCGGATCATCAGATGCGACGACGA
GTGCCCCCTCGACCACGCCTGCGGGACTCAAAGGGCGGAGAACCGCCGCA
GGTGTTCCCCGTGGACATGAACCTGGTGAAGGGGATTCTGCGAGAGTTCG
ATCGCGGAGCGTACGGGGAGGAGTTCAGAGGAGACCGGTTGGCGAAGATA
GCTGTCCTTGGCAAAGGCTCGACCAGCACGGTGTGGAAGGTGGTGGACGT
GGACTATCTCCGCGTGGTGGCGGTGAAGGAGATGGTCGTCTGCAACTCCA
AGGAGAGCGCCATCCTCCGGCACGAGCTGAGCGTGCTGAACCCGCAGATG
CAGCGCCTCATCCCCCCGAAGACGTGGCGGCTGTCCGGCCGGAAGAGCAA
GTCGGCGGCGGTGGCGGCGGCGGCGGTCAGCAGGATGAACGGGAACTCCC
CGGCCACCACCGCTGCCACCGCCGCCGCCGCTGCCGCTGACGGCAGCACC
AGCACCAGCACCAGCACCAGCCAGAGAAAAAACAACGGCGGGCGAGGCGG
GGGCTGGGGCGGCGGCTCGACCAGCACGGTGTGGAAGGTGGTGGACGTGG
ACTATCTCCGCGTGGTGGCGGTGAAGGAGATGGTCGTCTGCAACTCCAAG
GAGAGCGCCATCCTCCGGCACGAGCTGAGCGTGCTGAACCCGCAGATGCA
GCGCCTCATCCCCCCGAAGACGTGGCGGCTGTCCGGCCGGAAGAGCAAGT
CGGCGGCGGTGGCGGCGGCGGCGGTCAGCAGGATGAACGGGAACTCCCCG
GCCACCACCGCTGCCACCGCCGCCGCCGCTGCCGCTGACGGCAGCACCAG
CACCAGCACCAGCACCAGCCAGAGAAAAAACAACGGCGGGCGAGGCGGGG
GCTGGGGCGGCGAGGCCTCTTCGCTCGAGCGGCCGGGCAAGTGCGCGTAC
ATGCCGTGCTACTACGGCTCCTTCGTTTCGCAGGACGACGCGGGGCGGCC
ATGCGTAAGCATCGTCCTGGAGCACGTCTCGGGGGTCGACCTGGCCAAGT
GGACAGAGGAGATGGGTGGCACCAGCAGCGGCGCCGCTCGAGGGGGCCGG
TGGCCGGTGTCGCAAGCTGCTGCTGCTACCGCGGGGGGGACGGGGACGGG
GGCGGGGGCGGGGGCGGGGACGGGGACGATGCTGACGCCGACGGCGCGGC
GGGCGTCGGCGCAGCCGACGCCACCCCGCGCTCGGCCGCCGCCGCGGCCG
CCGGAGCCGGAGGTGTGGCTGGCGCGGGTGTGCCGCGACATGCTCGAGGC
GCTGCGGTACCTGCACGAGCGGCGGCGCATCCACAGGGACGTGAAGCCGG
GGAACCTGCTGCTGGGGCCGGAGGGCGCGAGGCTGGTGGACTTCGGGAGC
ACCATCGGCGAGGAGGAGGGGGAGGGGGACCGGATGCACGGGACCGTCAG
GTTCATGAGCCCCGAGCGCCTGTGCGCGAAGCCGTACCGGCCGAGCTCGG
ACCTGTGGGCGGCGGCGCTGACGGTGGCGTCAGCGGCGCTGGGAGAGAAC
CCGATACCGCACAGCCACAACGAGTTCGAGAACGCCGAGTACGCGGAGGC
GGCGTTCCGCCTGGTGCGCGAGCACCCGGCCTCGTCCGGCCTGTCGCCGC
GCCTGCTGAACTTCCTCAAGGCCGCGCTCGAGAGCGACCCGGACAAGCGG
CCCACCGTCGAGCAGATGCTGGCGCACCCCTTCGTGAGGCCTCTTCGCTC
GAGCGGCCGGGCAAGTGCGCGTACATGCCGTGCTACTACGGCTCCTTCGT
TTCGCAGGACGACGCGGGGCGGCCATGCGTAAGCATCGTCCTGGAGCACG
TCTCGGGGGTCGACCTGGCCAAGTGGACAGAGGAGATGGGTGGCACCAGC
AGCGGCGCCGCTCGAGGGGGCCGGTGGCCGGTGTCGCAAGCTGCTGCTGC
TACCGCGGGGGGGACGGGGACGGGGGCGGGGGCGGGGGCGGGGACGGGGA
CGATGCTGACGCCGACGGCGCGGCGGGCGTCGGCGCAGCCGACGCCACCC
CGCGCTCGGCCGCCGCCGCGGCCGCCGGAGCCGGAGGTGTGGCTGGCGCG
GGTGTGCCGCGACATGCTCGAGGCGCTGCGGTACCTGCACGAGCGGCGGC
GCATCCACAGGGACGTGAAGCCGGGGAACCTGCTGCTGGGGCCGGAGGGC
GCGAGGCTGGTGGACTTCGGGAGCACCATCGGCGAGGAGGAGGGGGAGGG
GGACCGGATGCACGGGACCGTCAGGTTCATGAGCCCCGAGCGCCTGTGCG
CGAAGCCGTACCGGCCGAGCTCGGACCTGTGGGCGGCGGCGCTGACGGTG
GCGTCAGCGGCGCTGGGAGAGAACCCGATACCGCACAGCCACAACGAGTT
CGAGAACGCCGAGTACGCGGAGGCGGCGTTCCGCCTGGTGCGCGAGCACC
CGGCCTCGTCCGGCCTGTCGCCGCGCCTGCTGAACTTCCTCAAGGCCGCG
CTCGAGAGCGACCCGGACAAGCGGCCCACCGTCGAGCAGATGCTGGCGCA
CCCCTTCGTG