prot_L-elsbetiae_contig987.18811.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig987.18811.1
Unique Nameprot_L-elsbetiae_contig987.18811.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length397
Homology
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BLAST of mRNA_L-elsbetiae_contig987.18811.1 vs. uniprot
Match: A0A6H5K8L6_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8L6_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 5.350e-12
Identity = 47/111 (42.34%), Postives = 59/111 (53.15%), Query Frame = 0 
Query:    8 PEVHGGVGELCFWGIMDYACSLQGQTYSTAVCGVSRCADIFVKNPGLCRFTSWKHLAHCCLAYLALSGSPDKYEELRASYNSVVDNGDRKAPPLEAFRGMNCICGNTFCKS 118
            PEV  G+G L F  I  Y     G T   A   V  CA IFV+ PGLCRF+ W+HL+HC L  LA     + +EELR  YNSV      + P  +A+  M   C + FC+S
Sbjct:  442 PEVGVGIGGLIFNAISAYLDISTGSTKLGAE-KVKLCAKIFVRYPGLCRFSRWQHLSHCLLTVLATLEDAEPFEELRQVYNSVRTEDLVEVPEQQAWT-MVGFCNHIFCRS 550
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig987.18811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K8L6_9PHAE5.350e-1242.34Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig987contigL-elsbetiae_contig987:19160..22585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig987.18811.1mRNA_L-elsbetiae_contig987.18811.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig987 18137..22623 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig987.18811.1 ID=prot_L-elsbetiae_contig987.18811.1|Name=mRNA_L-elsbetiae_contig987.18811.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=397bp
MVHVTQCPEVHGGVGELCFWGIMDYACSLQGQTYSTAVCGVSRCADIFVK
NPGLCRFTSWKHLAHCCLAYLALSGSPDKYEELRASYNSVVDNGDRKAPP
LEAFRGMNCICGNTFCKSMFNFMTVAALERQHSCLGDDASATSKDDSKLC
LSNTELQGVETISFSSTAPDESSAGGVSDKRRQTTDMEGGDREASPPGRA
TGTAGVAAAPVAAAAAIAPGAAPWFAGAVGGSVGNEQHPRGAGVGFGFGP
GAGSAGSITASSITSSSDGFGPVYSFGSFGNDGFGPVSAGDTGAVTAAPS
TTARQNWNRSQDQQGQRAGDGVAPLPPLLPLMPSAQTSSTSPGPAEEDGN
DDWNRGLDLLRASEFEGAEAVELLHAVDELLAEAMLEEFGEGDSLM*
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