mRNA_L-elsbetiae_contig9863.18804.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9863.18804.1
Unique NamemRNA_L-elsbetiae_contig9863.18804.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9863.18804.1 vs. uniprot
Match: D7FQ23_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ23_ECTSI)

HSP 1 Score: 248 bits (632), Expect = 1.170e-81
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 1 
Query:    1 QNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAAT 366
            +NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAAT
Sbjct:  108 KNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAAT 229
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BLAST of mRNA_L-elsbetiae_contig9863.18804.1 vs. uniprot
Match: A0A835YN63_9STRA (Superoxide dismutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN63_9STRA)

HSP 1 Score: 174 bits (442), Expect = 8.520e-53
Identity = 84/121 (69.42%), Postives = 98/121 (80.99%), Query Frame = 1 
Query:    1 QNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 363
            +NLAP   GGG++  G+L D I++Q+ S+  L EK+SAA+VGVQGSGWGWL YDKV  +LAIAT ANQDPLE TTG+VPLLGIDVWEHAYYLQYKNVRP YVK IF V+NW DV+ R  AA
Sbjct:  108 KNLAPTSAGGGKLECGSLKDAIDSQFGSLDGLKEKLSAAAVGVQGSGWGWLAYDKVACKLAIATTANQDPLEPTTGMVPLLGIDVWEHAYYLQYKNVRPSYVKEIFNVINWKDVECRYEAA 228
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BLAST of mRNA_L-elsbetiae_contig9863.18804.1 vs. uniprot
Match: A0A7S2D386_9STRA (Superoxide dismutase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D386_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.210e-52
Identity = 82/121 (67.77%), Postives = 99/121 (81.82%), Query Frame = 1 
Query:    1 QNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 363
            +NLAP  KGGG +  G LA +I+A++ S   + EKM+AA+V VQGSGWGWLGYDK +  +A+A CANQDPLEATTGLVPL GIDVWEHAYYLQYKNVRPDYVK+I+++ NW+DV  RL AA
Sbjct:  109 ENLAPPSKGGGGVPEGELAALIDAKFGSFDAMKEKMTAATVAVQGSGWGWLGYDKTSGSVAVACCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVKAIWELANWSDVAARLEAA 229
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BLAST of mRNA_L-elsbetiae_contig9863.18804.1 vs. uniprot
Match: A0A812QTX9_SYMMI (Superoxide dismutase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QTX9_SYMMI)

HSP 1 Score: 170 bits (430), Expect = 2.020e-51
Identity = 84/139 (60.43%), Postives = 100/139 (71.94%), Query Frame = 1 
Query:    1 QNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQ------------------YKNVRPDYVKSIFKVVNWADVQERLTAA 363
            +NLAPVG+GGGEMV+G L +MI +Q+ S+  L + MSA+++ +QGSGWGWLGYDK   +L +ATCANQDPLEATTGLVPL GIDVWEHAYYLQ                  YKNVRPDYV  I+K+VNW DV  RL  A
Sbjct:   57 ENLAPVGQGGGEMVSGDLENMINSQFGSLDGLKKTMSASTIAIQGSGWGWLGYDKTAGQLKVATCANQDPLEATTGLVPLFGIDVWEHAYYLQVRCRVCVRMSRRLTTSLQYKNVRPDYVNGIWKIVNWRDVAARLQKA 195
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BLAST of mRNA_L-elsbetiae_contig9863.18804.1 vs. uniprot
Match: A0A7R9BCY4_9CRUS (Superoxide dismutase n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BCY4_9CRUS)

HSP 1 Score: 169 bits (429), Expect = 6.650e-51
Identity = 85/121 (70.25%), Postives = 95/121 (78.51%), Query Frame = 1 
Query:    1 QNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 363
            QNL+P  KGGGE  TG LAD I+  + S   +  ++SAA+VGVQGSGWGWLGYDK  KRL IA CANQDPLE TTGLVPL GIDVWEHAYYLQYKNVRPDYV +I+KV NW DV +RL  A
Sbjct:  106 QNLSP--KGGGEP-TGALADQIKKDFGSFDNMKAQLSAATVGVQGSGWGWLGYDKQAKRLRIAVCANQDPLEPTTGLVPLFGIDVWEHAYYLQYKNVRPDYVNNIYKVANWEDVAKRLKDA 223
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BLAST of mRNA_L-elsbetiae_contig9863.18804.1 vs. uniprot
Match: A7RHP7_NEMVE (Superoxide dismutase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RHP7_NEMVE)

HSP 1 Score: 169 bits (428), Expect = 8.620e-51
Identity = 83/121 (68.60%), Postives = 97/121 (80.17%), Query Frame = 1 
Query:    4 NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAAT 366
            NL+P   GGGE  TG L + I+  + S     E+ +AA++ VQGSGWGWLGYDKVNKRLAIATC NQDPL+ TTGLVPLLGIDVWEHAYYLQYKNVRPDYVK+I+ V+NW +V ERL AA+
Sbjct:  103 NLSP--NGGGEP-TGELMEAIKRDFGSFENFKERFNAATIAVQGSGWGWLGYDKVNKRLAIATCFNQDPLQPTTGLVPLLGIDVWEHAYYLQYKNVRPDYVKAIYDVINWTNVAERLQAAS 220
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BLAST of mRNA_L-elsbetiae_contig9863.18804.1 vs. uniprot
Match: A0A7S2SP93_9STRA (Superoxide dismutase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP93_9STRA)

HSP 1 Score: 169 bits (427), Expect = 1.460e-50
Identity = 79/121 (65.29%), Postives = 96/121 (79.34%), Query Frame = 1 
Query:    1 QNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 363
            +NLAP  KGGG   TG LA +I+ ++ S   + +KM+AA+V VQGSGWGWLGYDK +  +A+  C NQDPLEATTGLVPL GIDVWEHAYYLQYKNVRPDYVK+I+++ NW+DV  RL AA
Sbjct:  105 ENLAPPSKGGGGEPTGELAALIDKKFGSFDAMKDKMTAATVAVQGSGWGWLGYDKASDSVAVTCCFNQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVKAIWQLANWSDVAARLEAA 225
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BLAST of mRNA_L-elsbetiae_contig9863.18804.1 vs. uniprot
Match: A0A1L3THW9_9MAXI (Superoxide dismutase n=1 Tax=Tigriopus kingsejongensis TaxID=1133412 RepID=A0A1L3THW9_9MAXI)

HSP 1 Score: 168 bits (426), Expect = 1.790e-50
Identity = 84/121 (69.42%), Postives = 94/121 (77.69%), Query Frame = 1 
Query:    1 QNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 363
            QNL P G G  E   G LA  IE  + S+  + E++SAASVGVQGSGWGWLGY K + RL IA+CANQDPLEATTGLVPL GIDVWEHAYYLQYKNVRPDYVK+IF+V NW DV +RL  A
Sbjct:  103 QNLTPGGSGEPE---GALAQAIERDFGSLKTMQERLSAASVGVQGSGWGWLGYHKPSGRLQIASCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVKAIFEVANWKDVADRLAQA 220
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BLAST of mRNA_L-elsbetiae_contig9863.18804.1 vs. uniprot
Match: A0A226DD29_FOLCA (Superoxide dismutase n=2 Tax=Folsomia candida TaxID=158441 RepID=A0A226DD29_FOLCA)

HSP 1 Score: 169 bits (429), Expect = 2.300e-50
Identity = 84/117 (71.79%), Postives = 94/117 (80.34%), Query Frame = 1 
Query:    4 NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERL 354
            NL+P  KGGGE  +G LAD+I+  + S     E++S A+VGVQGSGWGWLGY+KV KRL IATC NQDPLEATTGLVPL GIDVWEHAYYLQYKNVRPDYVK+IF V NW DV  RL
Sbjct:  149 NLSP--KGGGEP-SGELADLIKRDFGSFATFKERLSGATVGVQGSGWGWLGYNKVAKRLEIATCPNQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVKNIFNVANWTDVATRL 262
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BLAST of mRNA_L-elsbetiae_contig9863.18804.1 vs. uniprot
Match: A0A0L0GCR8_9EUKA (Superoxide dismutase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0GCR8_9EUKA)

HSP 1 Score: 166 bits (420), Expect = 3.270e-50
Identity = 78/120 (65.00%), Postives = 93/120 (77.50%), Query Frame = 1 
Query:    4 NLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGWLGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPDYVKSIFKVVNWADVQERLTAA 363
            NLAP  +GGG+  +G L D + A++ S+    + M+A +  VQGSGWGWLGYDKVNK L I TCANQDPLEATTGL+PLLGIDVWEHAYYLQYKNVRPDY+  I+K+VNW +V ER   A
Sbjct:   53 NLAPTNQGGGDFPSGKLYDDLIAKWGSVEAFQKDMAAKTAAVQGSGWGWLGYDKVNKSLKIQTCANQDPLEATTGLIPLLGIDVWEHAYYLQYKNVRPDYLNEIWKIVNWQNVAERYNKA 172
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9863.18804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ23_ECTSI1.170e-8199.18Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YN63_9STRA8.520e-5369.42Superoxide dismutase n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2D386_9STRA1.210e-5267.77Superoxide dismutase n=1 Tax=Dictyocha speculum Ta... [more]
A0A812QTX9_SYMMI2.020e-5160.43Superoxide dismutase n=1 Tax=Symbiodinium microadr... [more]
A0A7R9BCY4_9CRUS6.650e-5170.25Superoxide dismutase n=1 Tax=Notodromas monacha Ta... [more]
A7RHP7_NEMVE8.620e-5168.60Superoxide dismutase n=1 Tax=Nematostella vectensi... [more]
A0A7S2SP93_9STRA1.460e-5065.29Superoxide dismutase n=1 Tax=Rhizochromulina marin... [more]
A0A1L3THW9_9MAXI1.790e-5069.42Superoxide dismutase n=1 Tax=Tigriopus kingsejonge... [more]
A0A226DD29_FOLCA2.300e-5071.79Superoxide dismutase n=2 Tax=Folsomia candida TaxI... [more]
A0A0L0GCR8_9EUKA3.270e-5065.00Superoxide dismutase n=1 Tax=Sphaeroforma arctica ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9863contigL-elsbetiae_contig9863:6404..7375 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score248.8
Seed ortholog evalue1.3e-63
Seed eggNOG ortholog2880.D7FQ23
Preferred nameSOD2
KEGG koko:K04564
KEGG Pathwayko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000302,GO:0000303,GO:0000305,GO:0001101,GO:0001306,GO:0001315,GO:0001505,GO:0001666,GO:0001836,GO:0001889,GO:0001976,GO:0002237,GO:0002376,GO:0002520,GO:0002682,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003018,GO:0003032,GO:0003044,GO:0003068,GO:0003069,GO:0003070,GO:0003073,GO:0003085,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004784,GO:0005488,GO:0005507,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0006091,GO:0006355,GO:0006357,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006801,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006970,GO:0006974,GO:0006979,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007399,GO:0007507,GO:0007568,GO:0007571,GO:0007584,GO:0007610,GO:0007626,GO:0008015,GO:0008144,GO:0008150,GO:0008152,GO:0008217,GO:0008219,GO:0008285,GO:0008340,GO:0008630,GO:0008631,GO:0008637,GO:0009058,GO:0009266,GO:0009295,GO:0009314,GO:0009409,GO:0009410,GO:0009593,GO:0009605,GO:0009607,GO:0009611,GO:0009617,GO:0009628,GO:0009635,GO:0009636,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009743,GO:0009790,GO:0009791,GO:0009793,GO:0009838,GO:0009887,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009908,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010042,GO:0010043,GO:0010154,GO:0010212,GO:0010227,GO:0010259,GO:0010269,GO:0010332,GO:0010468,GO:0010506,GO:0010556,GO:0010646,GO:0010648,GO:0010660,GO:0010661,GO:0010821,GO:0010941,GO:0010942,GO:0012501,GO:0014823,GO:0015980,GO:0016020,GO:0016043,GO:0016209,GO:0016491,GO:0016721,GO:0016999,GO:0017000,GO:0017144,GO:0019219,GO:0019221,GO:0019222,GO:0019430,GO:0019825,GO:0019866,GO:0019899,GO:0022008,GO:0022414,GO:0022607,GO:0022900,GO:0022904,GO:0023051,GO:0023052,GO:0023057,GO:0030097,GO:0030145,GO:0030154,GO:0030182,GO:0030334,GO:0030335,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031667,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032364,GO:0032496,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0033043,GO:0033273,GO:0033483,GO:0033554,GO:0033591,GO:0033993,GO:0034021,GO:0034097,GO:0034284,GO:0034391,GO:0034393,GO:0034599,GO:0034614,GO:0034641,GO:0035150,GO:0035206,GO:0035296,GO:0035556,GO:0035690,GO:0035722,GO:0035900,GO:0035902,GO:0036094,GO:0036293,GO:0036296,GO:0036473,GO:0038001,GO:0040012,GO:0040017,GO:0042127,GO:0042221,GO:0042311,GO:0042391,GO:0042493,GO:0042542,GO:0042554,GO:0042592,GO:0042645,GO:0042742,GO:0042743,GO:0042802,GO:0042803,GO:0042981,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043167,GO:0043169,GO:0043207,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043473,GO:0043523,GO:0043524,GO:0043603,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045333,GO:0045428,GO:0045429,GO:0045471,GO:0045595,GO:0045596,GO:0045597,GO:0045598,GO:0045599,GO:0045776,GO:0046677,GO:0046686,GO:0046872,GO:0046914,GO:0046983,GO:0048066,GO:0048145,GO:0048147,GO:0048316,GO:0048367,GO:0048437,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048608,GO:0048660,GO:0048662,GO:0048666,GO:0048678,GO:0048699,GO:0048731,GO:0048732,GO:0048773,GO:0048856,GO:0048869,GO:0048878,GO:0050665,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050877,GO:0050880,GO:0050896,GO:0050931,GO:0051093,GO:0051094,GO:0051128,GO:0051147,GO:0051149,GO:0051150,GO:0051152,GO:0051171,GO:0051173,GO:0051186,GO:0051188,GO:0051239,GO:0051240,GO:0051252,GO:0051259,GO:0051260,GO:0051262,GO:0051270,GO:0051272,GO:0051289,GO:0051602,GO:0051606,GO:0051704,GO:0051707,GO:0051716,GO:0051881,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055093,GO:0055114,GO:0060255,GO:0060548,GO:0061008,GO:0061458,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070482,GO:0070671,GO:0070887,GO:0071000,GO:0071236,GO:0071310,GO:0071345,GO:0071349,GO:0071361,GO:0071450,GO:0071451,GO:0071704,GO:0071840,GO:0072359,GO:0072593,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090567,GO:0097159,GO:0097190,GO:0097193,GO:0097237,GO:0097249,GO:0097305,GO:0097306,GO:0097746,GO:0097755,GO:0098542,GO:0098754,GO:0098771,GO:0098796,GO:0098798,GO:0098800,GO:0098869,GO:0099402,GO:1900239,GO:1900241,GO:1900407,GO:1900408,GO:1901214,GO:1901215,GO:1901342,GO:1901363,GO:1901564,GO:1901700,GO:1901701,GO:1902175,GO:1902176,GO:1902531,GO:1902532,GO:1902882,GO:1902883,GO:1903146,GO:1903201,GO:1903202,GO:1903409,GO:1903426,GO:1903428,GO:1903506,GO:1904018,GO:1904407,GO:1904705,GO:1904706,GO:1905063,GO:1905065,GO:1905459,GO:1905461,GO:1905915,GO:1905917,GO:1905930,GO:1905932,GO:1990748,GO:2000026,GO:2000112,GO:2000145,GO:2000147,GO:2000377,GO:2000379,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
EggNOG free text desc.oxidoreductase activity, acting on superoxide radicals as acceptor
EggNOG OGsCOG0605@1,KOG0876@2759
EC1.15.1.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionSuperoxide dismutase
Ec32 orthologEc-01_007760.1
Exons2
Model size372
Cds size372
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817046.6767652-CDS-L-elsbetiae_contig9863:6403..65711622817046.6767652-CDS-L-elsbetiae_contig9863:6403..6571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9863 6404..6571 -
1691684006.9565794-CDS-L-elsbetiae_contig9863:6403..65711691684006.9565794-CDS-L-elsbetiae_contig9863:6403..6571Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9863 6404..6571 -
1622817046.6902297-CDS-L-elsbetiae_contig9863:7171..73751622817046.6902297-CDS-L-elsbetiae_contig9863:7171..7375Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9863 7172..7375 -
1691684006.971475-CDS-L-elsbetiae_contig9863:7171..73751691684006.971475-CDS-L-elsbetiae_contig9863:7171..7375Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9863 7172..7375 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9863.18804.1prot_L-elsbetiae_contig9863.18804.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9863 6404..7375 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9863.18804.1

>prot_L-elsbetiae_contig9863.18804.1 ID=prot_L-elsbetiae_contig9863.18804.1|Name=mRNA_L-elsbetiae_contig9863.18804.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp
QNLAPVGKGGGEMVTGTLADMIEAQYHSMGELTEKMSAASVGVQGSGWGW
LGYDKVNKRLAIATCANQDPLEATTGLVPLLGIDVWEHAYYLQYKNVRPD
YVKSIFKVVNWADVQERLTAATC*
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mRNA from alignment at L-elsbetiae_contig9863:6404..7375-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9863.18804.1 ID=mRNA_L-elsbetiae_contig9863.18804.1|Name=mRNA_L-elsbetiae_contig9863.18804.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=972bp|location=Sequence derived from alignment at L-elsbetiae_contig9863:6404..7375- (Laminarionema elsbetiae ELsaHSoW15)
CAGAACCTCGCACCGGTGGGCAAGGGGGGAGGGGAGATGGTGACCGGCAC
TCTGGCGGACATGATCGAGGCGCAGTACCACTCGATGGGAGAGCTCACCG
AGAAGATGAGCGCGGCGTCGGTGGGCGTGCAGGGTTCCGGGTGGGGGTGG
CTCGGCTACGACAAAGTCAACAAGCGGTTAGCGATCGCCACCTGCGCCAA
CCAGGTGTGTTGAGTGTGTGTATGTGTGTACGTGGATGTGCGTGTGTTTT
CGTGCCTTTGTCGCGGGGTGTGTTCCAGTGGGTGTGGGAGGGTGTGTGAG
GGTGTGTGAGGGTGAGGGTGTGCGGTCGTGCCTCTATCGCGGGTGGGTGG
TATGTGTAGCTAGCTCAAAGCCATACCTGGGGGGGCAGGGCGGGGCGGGT
CCTGCTGGGTGTCCCTCGCTCACGGGGGGGGGACGGGGGGGGGGCAAGAA
GGCTGCATATCCGTGCTTTGTGCGGCGGGCGGGCCGGCCGTGTTCTCTCC
CCGTTTGCCTGGTTTTGCTGTTGTTTGCCTGGTTTTGCTCTGGACGGTCC
TGTTGGTTGCTGCGTCGCTTTTCTCGGTTCTCACCTTCAGCGCCACGACG
CCCATGCCACACAGCGAGAGCGGCGGAGCGTTCGCCACGTGAAAGGCTTT
ACGATTCGCCCCAGTGTGCGTCGCGAGAAGCGGGTCAGGATCCAAAGAAT
ATCGAACCCGCGCACCGCAACCCAAGTAACCGGAGCCCCCCTGTCCCGTC
CCCCGTGCGTGCGCCGTCGCCCGATTAATGTTCCATTTTGCGGTGCAACA
ACAGGACCCCCTCGAAGCCACGACCGGACTCGTGCCCTTGCTGGGCATCG
ACGTGTGGGAGCACGCTTACTACCTCCAGTACAAGAACGTCCGGCCCGAC
TACGTGAAGTCGATCTTCAAGGTGGTCAACTGGGCGGATGTGCAGGAGAG
GCTTACGGCCGCGACCTGCTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9863:6404..7375-

>mRNA_L-elsbetiae_contig9863.18804.1 ID=mRNA_L-elsbetiae_contig9863.18804.1|Name=mRNA_L-elsbetiae_contig9863.18804.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig9863:6404..7375- (Laminarionema elsbetiae ELsaHSoW15)
CAGAACCTCGCACCGGTGGGCAAGGGGGGAGGGGAGATGGTGACCGGCAC
TCTGGCGGACATGATCGAGGCGCAGTACCACTCGATGGGAGAGCTCACCG
AGAAGATGAGCGCGGCGTCGGTGGGCGTGCAGGGTTCCGGGTGGGGGTGG
CTCGGCTACGACAAAGTCAACAAGCGGTTAGCGATCGCCACCTGCGCCAA
CCAGCAGAACCTCGCACCGGTGGGCAAGGGGGGAGGGGAGATGGTGACCG
GCACTCTGGCGGACATGATCGAGGCGCAGTACCACTCGATGGGAGAGCTC
ACCGAGAAGATGAGCGCGGCGTCGGTGGGCGTGCAGGGTTCCGGGTGGGG
GTGGCTCGGCTACGACAAAGTCAACAAGCGGTTAGCGATCGCCACCTGCG
CCAACCAGGACCCCCTCGAAGCCACGACCGGACTCGTGCCCTTGCTGGGC
ATCGACGTGTGGGAGCACGCTTACTACCTCCAGTACAAGAACGTCCGGCC
CGACTACGTGAAGTCGATCTTCAAGGTGGTCAACTGGGCGGATGTGCAGG
AGAGGCTTACGGCCGCGACCTGCTGAGACCCCCTCGAAGCCACGACCGGA
CTCGTGCCCTTGCTGGGCATCGACGTGTGGGAGCACGCTTACTACCTCCA
GTACAAGAACGTCCGGCCCGACTACGTGAAGTCGATCTTCAAGGTGGTCA
ACTGGGCGGATGTGCAGGAGAGGCTTACGGCCGCGACCTGCTGA
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