mRNA_L-elsbetiae_contig9863.18803.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig9863.18803.1
Unique Name	mRNA_L-elsbetiae_contig9863.18803.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot
Match: D7FQ22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ22_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 1.010e-158
Identity = 209/259 (80.69%), Postives = 235/259 (90.73%), Query Frame = 1

Query:    1 QQAVVDHVTLELSRVGEDLSEFKSDLPCVANGTCPVPAFRCSKGHVWESNGSPVCFYCPVCADTRVKTRIKHKRDLEAMQEIARGKGGECIADEYLGMDGKIGFRCGDGHEWLTSPANLVYKNTWCPKCAAVRSVERKKLTIAEMHQTARQFGGVFLSPEYHGAAVKHEWRCKREHTFWNTPNNVRRAEGGRRVATFCKICTMMDRNILKAALVGGLSKEEARSTLERMTRVGTMPMRKHFLKKRATGKSTLASKRRQM 777
            Q  VVDHV  EL ++   LSE+KSDLPCV  GTCPVP FRCSKGHVWE NG+PVCFYCP+CADTR+ TR+K KRDLEAMQEIARGKGGECIA+EYLG+D KI FRCGDGHEWLTSP+NLVYKNTWCPKCAA+RSVERKKLT+A+MHQTARQFGGVFLSPEY GAAVKHEWRCKR HTFWNTPNNVRRAEGGRRVATFCKICT MDR ILKAA++GGL K++A+STL+++  VG MP+R+HFLKKRATGKSTLA++RR+M
Sbjct:   48 QVVVVDHVAPELDKI-RHLSEYKSDLPCVQTGTCPVPVFRCSKGHVWEPNGTPVCFYCPICADTRITTRMKRKRDLEAMQEIARGKGGECIAEEYLGIDEKIAFRCGDGHEWLTSPSNLVYKNTWCPKCAALRSVERKKLTLADMHQTARQFGGVFLSPEYKGAAVKHEWRCKRGHTFWNTPNNVRRAEGGRRVATFCKICTSMDRRILKAAVLGGLDKDDAKSTLDQLNAVGAMPIRRHFLKKRATGKSTLAAQRRKM 305

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BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot
Match: A0A6H5JCH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCH6_9PHAE)

HSP 1 Score: 454 bits (1169), Expect = 2.220e-156
Identity = 210/259 (81.08%), Postives = 234/259 (90.35%), Query Frame = 1

Query:    1 QQAVVDHVTLELSRVGEDLSEFKSDLPCVANGTCPVPAFRCSKGHVWESNGSPVCFYCPVCADTRVKTRIKHKRDLEAMQEIARGKGGECIADEYLGMDGKIGFRCGDGHEWLTSPANLVYKNTWCPKCAAVRSVERKKLTIAEMHQTARQFGGVFLSPEYHGAAVKHEWRCKREHTFWNTPNNVRRAEGGRRVATFCKICTMMDRNILKAALVGGLSKEEARSTLERMTRVGTMPMRKHFLKKRATGKSTLASKRRQM 777
            Q  VVDHV  EL ++   LSE+KSDLPCV  GTCPVP FRCSKGHVWE NG+PVCFYCP+CADTR+ TR+K KRDLEAMQEIARGKGGECIA+EYLGMD KI FRCGDGHEWLTSP+NLVYKNTWCPKCAA+RSVERKKLT+A+MHQTARQFGGVFLSPEY GAAVKHEWRCKR HTFWNTPNNVRRAEGGRRVATFCKICT MDR ILKAA++GGL K++A+STL+++  VG MP R+HFLKKRATGKSTLA++RR+M
Sbjct:  225 QVVVVDHVAPELDKI-RHLSEYKSDLPCVQTGTCPVPVFRCSKGHVWEPNGTPVCFYCPICADTRITTRMKRKRDLEAMQEIARGKGGECIAEEYLGMDEKIAFRCGDGHEWLTSPSNLVYKNTWCPKCAALRSVERKKLTLADMHQTARQFGGVFLSPEYKGAAVKHEWRCKRGHTFWNTPNNVRRAEGGRRVATFCKICTSMDRRILKAAVLGGLDKDDAKSTLDQLNAVGAMPTRRHFLKKRATGKSTLAAQRRKM 482

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BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot
Match: A0A836C7R5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7R5_9STRA)

HSP 1 Score: 186 bits (471), Expect = 1.760e-53
Identity = 85/190 (44.74%), Postives = 111/190 (58.42%), Query Frame = 1

Query:   76 LPCVANGTCPVPAFRCSKGHVWES-NGSPVCFYCPVCADTRVKTRIKHKR-DLEAMQEIARGKGGECIADEYLGMDGKIGFRCGDGHEWLTSPANLVYKNTWCPKCAAVRSVERKKLTIAEMHQTARQFGGVFLSPEYHGAAVKHEWRCKREHTFWNTPNNVRRAEGGRRVATFCKICTMMDRNILKAAL 639
            LPCV +G CP   F C +GH W++  G+P CF+CP C+   V+ R   +R  L ++ E+A  +GGEC++ EY G+     F+C  GH W     N+VY  +WCP CA  +     +L+ A+MH TA QFGG FLSP YHGA  KH WRC   HTF  TPN +RR  GG+R   FC  C+   R I    L
Sbjct:  107 LPCVESGVCPFVRFECPRGHTWKAVAGAPACFFCPQCSAAEVRGRRARRRLSLASLAELAAARGGECVSAEYRGLMEPHDFKCAKGHVWSALANNVVYCASWCPTCAKGQRAASNRLSAADMHATAAQFGGEFLSPTYHGADKKHLWRCSAGHTFKQTPNAIRRRVGGKRRPAFCPECSRAQRAISAVTL 296

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BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot
Match: UPI0007856E0F (hypothetical protein n=1 Tax=Polynucleobacter sinensis TaxID=1743157 RepID=UPI0007856E0F)

HSP 1 Score: 118 bits (296), Expect = 5.310e-29
Identity = 56/149 (37.58%), Postives = 88/149 (59.06%), Query Frame = 1

Query:  115 FRCSKGHVWES--NGSPVCFYCPVCADTRVKTRIKHKRDLEAMQEIARGKGGECIADEYLGMDGKIGFRCGDGHEWLTSPANLVYKNTWCPKCAAVRSVERKKLTIAEMHQTARQFGGVFLSPEYHGAAVKHEWRCKREHTFWNTPNNV 555
            + CS+ H W +  N      +CP+CA++        K+ +E  Q IA+ +GG C++DEYLG+  K+ +RCG+GHEW ++P  +   N WCPKC  ++   + + +I +M   A + GGV LS EY  A  K +WRCK  H + +TP+ +
Sbjct:   26 WTCSERHEWSALPNTIKKGHWCPICANSGTAA----KKSIEEFQAIAKERGGVCLSDEYLGIFKKLKWRCGEGHEWESTPKTIQAGN-WCPKCGRIKVGNQLRKSIDDMQVLAYRNGGVCLSNEYLNACTKLKWRCKEGHVWESTPDTI 169

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BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot
Match: A0A1T1HII4_9PSED (Uncharacterized protein n=2 Tax=Pseudomonas sp. MF4836 TaxID=1960827 RepID=A0A1T1HII4_9PSED)

HSP 1 Score: 110 bits (275), Expect = 2.240e-24
Identity = 59/170 (34.71%), Postives = 88/170 (51.76%), Query Frame = 1

Query:  115 FRCSKGHVWESNGSPVC--FYCPVCADTRVKTRIKHKRDLEAMQEIARGKGGECIADEYLGMDGKIGFRCGDGHEWLTSPANLVYKNTWCPKCAAVRSVERKKLTIAEMHQTARQFGGVFLSPEYHGAAVKHEWRCKREHTFWNTPNNVRRAEGGRRVATFCKICTMMDR 618
            FRC++GH WE+ G  V    +CP CA  R     +H+  LE +++ A  +GG+C+A+ YLG+  +  FRC  GHEW T    ++ +  WC  CA     ++K+L+I + H +A+  GG  LS  Y     K  W C R H++     N+R          +C  C  MDR
Sbjct:  181 FRCARGHEWEAQGHEVKRRTWCPECARLRKVEGYRHQDGLERLRQKAAERGGQCLAEAYLGVGSRYRFRCAKGHEWETLGRRML-RGGWCLICA----YDKKRLSIEDAHASAKARGGQCLSTSYIRVIDKLHWLCHRGHSWHAQYANIRAGH-------WCPECASMDR 338

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BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot
Match: A0A4Y8N5J5_9BURK (Uncharacterized protein n=1 Tax=Paraburkholderia dipogonis TaxID=1211383 RepID=A0A4Y8N5J5_9BURK)

HSP 1 Score: 107 bits (268), Expect = 1.300e-23
Identity = 59/184 (32.07%), Postives = 89/184 (48.37%), Query Frame = 1

Query:   91 NGTCPVPAFR---------CSKGHVWESNGSPVCF--YCPVCADTRVKTRIKHKRDLEAMQEIARGKGGECIADEYLGMDGKIGFRCGDGHEWLTSPANLVYKNTWCPKCAAVRSVERKKLTIAEMHQTARQFGGVFLSPEYHGAAVKHEWRCKREHTFWNTPNNVRRAEGGRRVATFCKICTM 609
            NG C    +R         C +GH WES  S V    +C VC   R     +  + L  MQ +A+ +GG+C++  Y     K+ + C  GH+W  +P  +    +WCP C    SVE+++LTIA+MH  AR+ GG  LS  Y     +  WRC + H +   P ++R  +   R     ++ TM
Sbjct:   26 NGRCLSSTYRDTNTKLLWQCDQGHTWESTPSNVKAGSWCQVCGKAR-----REAQWLAEMQALAQARGGKCLSIRYTRFQEKLRWECDQGHQWDATPGGIKTSGSWCPVC----SVEKQRLTIADMHVAAREHGGECLSASYFDNLTRLRWRCAQGHEWDAKPMHIRLGQWCPRCGRQWRLLTM 200

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BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot
Match: UPI001917F276 (hypothetical protein n=1 Tax=Paraburkholderia sabiae TaxID=273251 RepID=UPI001917F276)

HSP 1 Score: 95.1 bits (235), Expect = 3.780e-19
Identity = 49/164 (29.88%), Postives = 83/164 (50.61%), Query Frame = 1

Query:  118 RCSKGHVWESNGSPVC--FYCPVCADTRVKTRIKHKRDLEAMQEIARGKGGECIADEYLGMDGKIGFRCGDGHEWLTSPANLVYKNTWCPKCAAVRSVERKKLTIAEMHQTARQFGGVFLSPEYHGAAVKHEWRCKREHTFWNTPNNVRRAEGGRRVATFCKIC 603
            +C++GH+W    + +    +CP C+  + ++ I      +AMQ +AR +GG C+++ Y+   GK+ ++C +GHEW  SP ++   N WC  C  +   E  +  +  M   A + GG  LS  Y  +  K  W+C+  H +  TP  VR A        +C +C
Sbjct:   30 QCARGHIWRFGSAKLKNGLWCPQCSHEQRRSGI------DAMQALARRRGGRCVSETYVSSHGKLRWQCRNGHEWTMSPISVQAGN-WCAVCLRI---EHDRTWLPLMQALALRRGGKCLSDTYVNSRTKLRWQCRHGHIWEATPAGVREA------GAWCPVC 177

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BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot
Match: A0A7W5IPY5_9BURK (Uncharacterized protein n=3 Tax=Burkholderiaceae TaxID=119060 RepID=A0A7W5IPY5_9BURK)

HSP 1 Score: 93.2 bits (230), Expect = 2.850e-18
Identity = 48/142 (33.80%), Postives = 76/142 (53.52%), Query Frame = 1

Query:  115 FRCSKGHVWESNGSPVC--FYCPVCADTRVKTRIKHKRDLEAMQEIARGKGGECIADEYLGMDGKIGFRCGDGHEWLTSPANLVYKNTWCPKCAAVRSVERKKLTIAEMHQTARQFGGVFLSPEYHGAAVKHEWRCKREHTF 534
            FRC  GH +E++ + +    +C  C+  +     + +  L+ +Q+ AR +GGEC+AD Y G   K  FRCG G EW  +   ++ K  WCP+C+  R   R+   +AE+ Q A   GG+ LS  Y G   ++ +RC   H +
Sbjct:   91 FRCGAGHGFEASAASILDGHWCARCSTHKRAEDRRLQGGLKPIQDRARERGGECLADTYNGRMAKYRFRCGQGREWEVAGIEVMRK-AWCPQCSVERM--RRPHGLAELQQAANNRGGICLSSHYTGVRHEYGFRCAHGHEW 229

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BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot
Match: UPI00149256AD (hypothetical protein n=1 Tax=Paenibacillus foliorum TaxID=2654974 RepID=UPI00149256AD)

HSP 1 Score: 92.0 bits (227), Expect = 2.410e-17
Identity = 51/134 (38.06%), Postives = 75/134 (55.97%), Query Frame = 1

Query:  220 RDLEAMQEIARGKGGECIADEYLGMDGKIGFRCGDGHEWLTSPANLVYKNTWCPKCAAVRSVERKKLTIAEMHQTARQFGGVFLSPEYHGAAVKHEWRCKREHTFWNTPNNVRRAEGGRRVATFCKICTMMDRN 621
            + L  ++E+AR  GGEC+A  Y+     + +RC  GHEW   P N +  + WC KCA       + LTIA+MH+TARQ  G+ LS EY  +     W+C++ HT+  T ++VR    GR    +CK C+   R+
Sbjct:  311 KPLNKLRELARKHGGECLATSYINNKTPVPWRCKFGHEWNAKP-NDITSSQWCGKCAG-----NQPLTIADMHETARQRNGLCLSNEYINSQTHLLWQCEQGHTWKATASDVR---SGR----WCKKCSTKRRS 431

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BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot
Match: A0A3N6B6Y5_9BACI (Uncharacterized protein n=1 Tax=Priestia endophytica TaxID=135735 RepID=A0A3N6B6Y5_9BACI)

HSP 1 Score: 90.1 bits (222), Expect = 1.470e-16
Identity = 44/132 (33.33%), Postives = 70/132 (53.03%), Query Frame = 1

Query:  211 KHKRDLEAMQEIARGKGGECIADEYLGMDGKIGFRCGDGHEWLTSPANLVYKNTWCPKCAAVRSVERKKLTIAEMHQTARQFGGVFLSPEYHGAAVKHEWRCKREHTFWNTPNNVRRAEGGRRVATFCKICT 606
            K    L  ++ +A G+ G+C++ EY+    K+ + C  GH+W   P++ V + TWCPKCA   S   ++L+I EM + A   GG  LS  Y  A  K  W C + H +   P++V++        T+C IC+
Sbjct:  501 KFNSQLNQLKNLAAGRQGKCLSQEYINAHTKLKWECKLGHQWEAVPSS-VQRGTWCPKCAIQSSGNSQRLSIEEMQEIAVSRGGKCLSAHYINAKTKLLWECSQGHQWEAVPSSVKKG-------TWCNICS 624

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig9863.18803.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQ22_ECTSI	1.010e-158	80.69	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JCH6_9PHAE	2.220e-156	81.08	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836C7R5_9STRA	1.760e-53	44.74	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
UPI0007856E0F	5.310e-29	37.58	hypothetical protein n=1 Tax=Polynucleobacter sine...	[more]
A0A1T1HII4_9PSED	2.240e-24	34.71	Uncharacterized protein n=2 Tax=Pseudomonas sp. MF...	[more]
A0A4Y8N5J5_9BURK	1.300e-23	32.07	Uncharacterized protein n=1 Tax=Paraburkholderia d...	[more]
UPI001917F276	3.780e-19	29.88	hypothetical protein n=1 Tax=Paraburkholderia sabi...	[more]
A0A7W5IPY5_9BURK	2.850e-18	33.80	Uncharacterized protein n=3 Tax=Burkholderiaceae T...	[more]
UPI00149256AD	2.410e-17	38.06	hypothetical protein n=1 Tax=Paenibacillus folioru...	[more]
A0A3N6B6Y5_9BACI	1.470e-16	33.33	Uncharacterized protein n=1 Tax=Priestia endophyti...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig9863	contig	L-elsbetiae_contig9863:485..4448 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Bacteria
Seed ortholog score	110.9
Seed ortholog evalue	9.7e-22
Seed eggNOG ortholog	1097668.BYI23_B010770
Hectar predicted targeting category	other localisation
EggNOG free text desc.	Hypothethical protein
EggNOG OGs	1K7QY@119060,1RGTF@1224,2DC1Q@1,2VY4F@28216,2ZCH9@2
COG Functional cat.	S
Best tax level	Burkholderiaceae
Best eggNOG OG	NA\|NA\|NA
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-01_007770.1
Exons	6
Model size	855
Cds size	855
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig9863.18803.1	prot_L-elsbetiae_contig9863.18803.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig9863 485..4448 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817046.5437768-CDS-L-elsbetiae_contig9863:484..612	1622817046.5437768-CDS-L-elsbetiae_contig9863:484..612	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 485..612 +
1691684006.8585417-CDS-L-elsbetiae_contig9863:484..612	1691684006.8585417-CDS-L-elsbetiae_contig9863:484..612	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 485..612 +
1622817046.5579464-CDS-L-elsbetiae_contig9863:1104..1265	1622817046.5579464-CDS-L-elsbetiae_contig9863:1104..1265	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 1105..1265 +
1691684006.8819573-CDS-L-elsbetiae_contig9863:1104..1265	1691684006.8819573-CDS-L-elsbetiae_contig9863:1104..1265	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 1105..1265 +
1622817046.5737677-CDS-L-elsbetiae_contig9863:2414..2494	1622817046.5737677-CDS-L-elsbetiae_contig9863:2414..2494	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 2415..2494 +
1691684006.8956478-CDS-L-elsbetiae_contig9863:2414..2494	1691684006.8956478-CDS-L-elsbetiae_contig9863:2414..2494	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 2415..2494 +
1622817046.585327-CDS-L-elsbetiae_contig9863:3300..3432	1622817046.585327-CDS-L-elsbetiae_contig9863:3300..3432	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 3301..3432 +
1691684006.9104123-CDS-L-elsbetiae_contig9863:3300..3432	1691684006.9104123-CDS-L-elsbetiae_contig9863:3300..3432	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 3301..3432 +
1622817046.5962217-CDS-L-elsbetiae_contig9863:3746..3842	1622817046.5962217-CDS-L-elsbetiae_contig9863:3746..3842	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 3747..3842 +
1691684006.9316993-CDS-L-elsbetiae_contig9863:3746..3842	1691684006.9316993-CDS-L-elsbetiae_contig9863:3746..3842	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 3747..3842 +
1622817046.6444235-CDS-L-elsbetiae_contig9863:4190..4448	1622817046.6444235-CDS-L-elsbetiae_contig9863:4190..4448	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 4191..4448 +
1691684006.9447534-CDS-L-elsbetiae_contig9863:4190..4448	1691684006.9447534-CDS-L-elsbetiae_contig9863:4190..4448	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig9863 4191..4448 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig9863:485..4448+
coding sequence from alignment at L-elsbetiae_contig9863:485..4448+

protein sequence of mRNA_L-elsbetiae_contig9863.18803.1

>prot_L-elsbetiae_contig9863.18803.1 ID=prot_L-elsbetiae_contig9863.18803.1|Name=mRNA_L-elsbetiae_contig9863.18803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=285bp
QQAVVDHVTLELSRVGEDLSEFKSDLPCVANGTCPVPAFRCSKGHVWESN
GSPVCFYCPVCADTRVKTRIKHKRDLEAMQEIARGKGGECIADEYLGMDG
KIGFRCGDGHEWLTSPANLVYKNTWCPKCAAVRSVERKKLTIAEMHQTAR
QFGGVFLSPEYHGAAVKHEWRCKREHTFWNTPNNVRRAEGGRRVATFCKI
CTMMDRNILKAALVGGLSKEEARSTLERMTRVGTMPMRKHFLKKRATGKS
TLASKRRQMKRTSDKRSSSSSSSGSSGGIYKSST*

mRNA from alignment at L-elsbetiae_contig9863:485..4448+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig9863.18803.1 ID=mRNA_L-elsbetiae_contig9863.18803.1|Name=mRNA_L-elsbetiae_contig9863.18803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3964bp|location=Sequence derived from alignment at L-elsbetiae_contig9863:485..4448+ (Laminarionema elsbetiae ELsaHSoW15)
CAGCAGGCGGTGGTGGACCACGTGACGCTGGAGCTTAGCAGGGTTGGCGA
GGACCTGTCCGAGTTCAAGTCGGACCTTCCCTGCGTCGCCAACGGAACGT
GCCCTGTTCCGGCCTTCCGCTGTTCCAAGTGAGCATGCCGAGGCACAGGG
GATGGACGCGTCGCCGCGGCACCCTGCCGGCTGGCGACCTCTTGATCCCT
TCGAGCAACTCGAGAAATTGGCTCGTTTTTTGTAACGCGAGCCCGCCCGT
CTCAGGGGTGGTGTCCTGTAGCTACATACGTCGTTGGTGCGAGGTTTTCG
TCCGCGCCCACGGGGATGTCTGTCTTGTCTTGGACGAAGCAGAGGGTGCG
AGAGAGAGAGAGAGAGGTGGTACCTTGGTAGATAGGTGGTGGTGGCGGCA
GTACCGACGGTGACCGTCAACACCGGCCAAGCTGCTGCTGCTGCTGCATG
CCGGTCGGCTCGCGTGCGTGCCTGACACGCACACACACGCGCGCGCGCAA
ACATATACACGAGTGTTTTTTGTATTGTTTTTTTTTTCGTTTTTTTCGCC
AAACACCAAACACCTCCCTCCCCCCCCCGCGGCACCACACCACACCCCCA
ACGCGCCCTTGCCGCACCAGGGGGCACGTGTGGGAGTCGAACGGCAGCCC
TGTCTGCTTCTACTGCCCCGTCTGCGCGGACACGAGGGTGAAGACGAGGA
TCAAGCACAAGAGGGACCTGGAGGCAATGCAGGAAATCGCCAGAGGAAAA
GGGGGAGAGTGCATCGCCGACGAATACCTCGGTGAGTACACCCGACGAGA
CTTTGGCGCGAGTGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGCACGA
CAACCCGAAAAAGGGGGGGGGGGGGGGGGGGGGGTGGTTTGCGTACGCCC
CCGCGGGGCCTTNNNNNNNNNNGGGGGGGGGGGCGGCGGGGGGCGGGTGG
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGCACGACAACACGACAAAGCGAGGGGAGGGAGT
GGTGGCGTAGTTTACGTACTGCCACGCGTGGCCTTGTCTTCAGGTCACGT
GAAGAAGGTTTAATTTAGTGGGGGGGGGGGGCACGCCGTACAAGCAAGCC
CGCGCGAACACACCAAGGCGGTTGATTGGTTTCCCCCCGCCCTTCGCATG
TATTTCGACAACGGGCGAGGGGTGTCAAGTTTGGAAAGGGGGGAGGGAGA
GCGGCCTTGCGCAGGGAGCTTCCCGAAGACGCACAGCTCGGCCCCGGCTG
CCTCTGTTTAGGTGCCGATAAGCCTGATGATGGGGACAAAACACGACAAT
CGAGGCAACGAAAACGAGCTTCCTTCTCGATACTACACCACGTTTACCAA
CTTGCTCTCCCCTTGTTTGTCTGAATGGATGAACAAATGGGGGGGGTGTT
TCGATGTTTGTGTGGTATTTAAGAGTATACTGGCGGCCGGCCGGCTTTCG
GCGGCAAACAAAACACAATTTACCTCCTGGGACCTACCTGGTAGGCCAAG
AGAGATCAGCTCACGAAAACCCGCCGCACCTTTTCCTGGCGGTGCTGCGG
TTTCCTCTTGTTGTAGCGCGAACCTTGTCTTTTTTGGGGTGCAGCAAGAC
ACATGGCACAAGTGAAGGGTCCTCTTCTGGTGCAAAAAACACGGAACCCC
TATTTTTGGGCCACATTGTCTCTTTCTTGCCCCTACTACTGCTGTGCTGC
TTAAAACTGTGACTTTTGCTTCCACTCTAATTTTGGACGACTTTTGTCTT
TCTTGCCACCTGTGCTCTGCTTAAAACCGTGACTTTTTTGCTTTCGTTTT
TTTTGCTCGCCGGTCGATGTTCGTGCTCTTGATCGTCGACGCAAATGCGA
ACGGACCGATCCGCCGCCCAAACCGAAAAGGCATGGACGGGAAGATCGGC
TTCCGGTGCGGCGACGGGCATGAGTGGCTCACCTCGCCGGCGAACCTTGT
CTACAAAAACGTGAGAGAGAGACAGACAGACAGGCGAAAGAGAGTGACAG
ACGGAGAGACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATGTATCTCAGGTGCTTC
GTTCGTGCGATGCAAGGAGAGTCTGTTGTTGTTGCCTTGTTGTTGTGCAC
TATGCGCTATTTACTACCGCTGTTTTTTTGTTTTGTTTGGTTGTGTGTCT
TGGGGGGGGGGGGGGTGGAAGTTCAGAGCTTCACGCTGCAAATTCCTTGT
CAGCCTTGGTTCGAGCTAAATCAGGATTGAGTCCATCCGGATTCCAGTGT
TGTCAAGAGGCAGTAATTGTCCAGTCTTGGTTATATAATTGCGCTGGGAA
GCGGTCGGGGGGATGTCAGGTACAACGCCGTGCTGGGGGCTGCGTGAGCA
CATTGCTACATACCTCTCTTATCTATTTTTACATCTGCTTTGGTCGCACA
GATATGCAGAACTGCTGATCTTCGTGTCTACCTCCTCTGCTGCCCTCCTC
TGTGCTTTGTATCCCTGTGGAAAGTTCGTCTCCCTCGTTCAAGTATTCTA
GGGCCCCTAAGCCAACCCTTAGCCCTAACCCTAAACCTAAGTTCGTCTCC
CTCGTTCAAGTATTCTAGGGCCCCTAAGCTTTCCGGTGCAACGACCAAGA
TTGTCGCGGGCTGTTCACGGACGAAGCGCGCACCGCTGATGTGCCTTCAT
TCCGGTAGTTTTTTTTTTTTTCGTACCGTGCGCGCTCTGTGTGCTTCGTG
TTCGCGTTATCTGCAGACATGGTGTCCGAAGTGCGCCGCCGTTCGCTCGG
TGGAGCGCAAGAAGCTCACCATCGCCGAGATGCACCAGACAGCTCGGCAA
TTCGGAGGCGTGTTTCTGAGCCCAGAGTACCACGGGGCTGCGGTCAAGGT
GTGGTGGTGGCGCTGCACATCTCGTACGTACTTTTGCTCGGTATTTTTTT
GGGAGAGGTAGTGGAAGAAGGGGCTCGGTCGTTTTTTTTCCAACGGTGAA
CCCCCCGAAACGCAAGGTCACGTGTGCTGCAATGGCGGCCACCTCATCGG
CAGTTTTCGAAAAAAGCTCAGGTTGGCTTTTTATTTTTTTTCAATTTTTT
TGTTGTCTCTTGACTCTTGTTTTGCTTTCCTCGCCGGTCCACGTGTTCTT
CAACTTGTGTTTTTTCTGCCGGCGTTGCTTTTGGTCCGCGTGATGTGTGC
GCGTCGTTTCAGCACGAGTGGCGGTGCAAACGAGAGCACACTTTCTGGAA
CACGCCGAACAACGTCCGCCGCGCGGAAGGGGGCCGTCGAGTCGCTACCT
TCTGCAAGGTACGTTCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCCGCTGCTGCTGCTGCTGCCGCCGGTTTGTA
GCTACTATATGATTCGGCACGCACCATGGGGCATGATGCACTTACCGACC
GGCCCACGAGCGCTTTCCTCTTGATTTTCCCACGTATTTACCTGGAATGT
TTGTTCTCCACTTTGCATATCCAGTCTTGACTGGAGCCCCCCGCTATGGC
TCTACGCAGCCAGTGCCATGGTACACGCACCGATCCGCTGTCATTTATAC
AATAGGCTCGATTTCTTATACACATGGCACTCTTGGCGACTTCGTCGCGA
AAACAGATATGCACGATGATGGATAGGAACATCCTGAAGGCAGCCCTCGT
GGGGGGCTTAAGCAAGGAGGAGGCGAGGAGCACGCTGGAGAGAATGACGA
GGGTGGGCACCATGCCCATGCGGAAACACTTCCTGAAGAAGAGGGCGACG
GGGAAATCGACGCTGGCGTCAAAGAGGAGACAAATGAAACGCACCAGCGA
CAAGCGGAGCAGCAGCAGCAGCAGTAGTGGCAGCAGCGGAGGTATATACA
AGAGCAGTACGTGA

Coding sequence (CDS) from alignment at L-elsbetiae_contig9863:485..4448+

>mRNA_L-elsbetiae_contig9863.18803.1 ID=mRNA_L-elsbetiae_contig9863.18803.1|Name=mRNA_L-elsbetiae_contig9863.18803.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1710bp|location=Sequence derived from alignment at L-elsbetiae_contig9863:485..4448+ (Laminarionema elsbetiae ELsaHSoW15)
CAGCAGGCGGTGGTGGACCACGTGACGCTGGAGCTTAGCAGGGTTGGCGA
GGACCTGTCCGAGTTCAAGTCGGACCTTCCCTGCGTCGCCAACGGAACGT
GCCCTGTTCCGGCCTTCCGCTGTTCCAACAGCAGGCGGTGGTGGACCACG
TGACGCTGGAGCTTAGCAGGGTTGGCGAGGACCTGTCCGAGTTCAAGTCG
GACCTTCCCTGCGTCGCCAACGGAACGTGCCCTGTTCCGGCCTTCCGCTG
TTCCAAGGGGCACGTGTGGGAGTCGAACGGCAGCCCTGTCTGCTTCTACT
GCCCCGTCTGCGCGGACACGAGGGTGAAGACGAGGATCAAGCACAAGAGG
GACCTGGAGGCAATGCAGGAAATCGCCAGAGGAAAAGGGGGAGAGTGCAT
CGCCGACGAATACCTCGGGGGCACGTGTGGGAGTCGAACGGCAGCCCTGT
CTGCTTCTACTGCCCCGTCTGCGCGGACACGAGGGTGAAGACGAGGATCA
AGCACAAGAGGGACCTGGAGGCAATGCAGGAAATCGCCAGAGGAAAAGGG
GGAGAGTGCATCGCCGACGAATACCTCGGCATGGACGGGAAGATCGGCTT
CCGGTGCGGCGACGGGCATGAGTGGCTCACCTCGCCGGCGAACCTTGTCT
ACAAAAACGCATGGACGGGAAGATCGGCTTCCGGTGCGGCGACGGGCATG
AGTGGCTCACCTCGCCGGCGAACCTTGTCTACAAAAACACATGGTGTCCG
AAGTGCGCCGCCGTTCGCTCGGTGGAGCGCAAGAAGCTCACCATCGCCGA
GATGCACCAGACAGCTCGGCAATTCGGAGGCGTGTTTCTGAGCCCAGAGT
ACCACGGGGCTGCGGTCAAGACATGGTGTCCGAAGTGCGCCGCCGTTCGC
TCGGTGGAGCGCAAGAAGCTCACCATCGCCGAGATGCACCAGACAGCTCG
GCAATTCGGAGGCGTGTTTCTGAGCCCAGAGTACCACGGGGCTGCGGTCA
AGCACGAGTGGCGGTGCAAACGAGAGCACACTTTCTGGAACACGCCGAAC
AACGTCCGCCGCGCGGAAGGGGGCCGTCGAGTCGCTACCTTCTGCAAGCA
CGAGTGGCGGTGCAAACGAGAGCACACTTTCTGGAACACGCCGAACAACG
TCCGCCGCGCGGAAGGGGGCCGTCGAGTCGCTACCTTCTGCAAGATATGC
ACGATGATGGATAGGAACATCCTGAAGGCAGCCCTCGTGGGGGGCTTAAG
CAAGGAGGAGGCGAGGAGCACGCTGGAGAGAATGACGAGGGTGGGCACCA
TGCCCATGCGGAAACACTTCCTGAAGAAGAGGGCGACGGGGAAATCGACG
CTGGCGTCAAAGAGGAGACAAATGAAACGCACCAGCGACAAGCGGAGCAG
CAGCAGCAGCAGTAGTGGCAGCAGCGGAGGTATATACAAGAGCAGTACGT
GAATATGCACGATGATGGATAGGAACATCCTGAAGGCAGCCCTCGTGGGG
GGCTTAAGCAAGGAGGAGGCGAGGAGCACGCTGGAGAGAATGACGAGGGT
GGGCACCATGCCCATGCGGAAACACTTCCTGAAGAAGAGGGCGACGGGGA
AATCGACGCTGGCGTCAAAGAGGAGACAAATGAAACGCACCAGCGACAAG
CGGAGCAGCAGCAGCAGCAGTAGTGGCAGCAGCGGAGGTATATACAAGAG
CAGTACGTGA