mRNA_L-elsbetiae_contig986.18801.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig986.18801.1 vs. uniprot
Match: D7FH01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH01_ECTSI) HSP 1 Score: 315 bits (806), Expect = 1.670e-91 Identity = 160/165 (96.97%), Postives = 165/165 (100.00%), Query Frame = 3 Query: 564 VPTGVDVVVVGGGHAGCEAAAASARAGARTVLVTQKKDTIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMNGTPNLSVFEGSVEDVLLDGEAIKGIVTADGTEIACKGVVITTGTFLRGKCYIGQ 1058 +PTGVDVVVVGGGHAGCEAA+ASARAGARTVLVTQKK+TIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEM+GTPNLSVFEGSVEDVLL+GEAIKGIVTADGTEIACKGVVITTGTFLRGKCYIGQ Sbjct: 1 MPTGVDVVVVGGGHAGCEAASASARAGARTVLVTQKKETIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMHGTPNLSVFEGSVEDVLLEGEAIKGIVTADGTEIACKGVVITTGTFLRGKCYIGQ 165
BLAST of mRNA_L-elsbetiae_contig986.18801.1 vs. uniprot
Match: A0A835YS09_9STRA (Glucose inhibited division protein A-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS09_9STRA) HSP 1 Score: 266 bits (680), Expect = 1.430e-74 Identity = 131/162 (80.86%), Postives = 146/162 (90.12%), Query Frame = 3 Query: 573 GVDVVVVGGGHAGCEAAAASARAGARTVLVTQKKDTIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMNGTPNLSVFEGSVEDVLLDGEAIKGIVTADGTEIACKGVVITTGTFLRGKCYIGQ 1058 GVDVVV+GGGHAGCEAAAASAR GARTVL+TQKKDTIGELSCNPSIGGIGKGH+VREVDALDG+MGRVID AGIHFRMLN+RKGPAVRGPRAQADRD+YR+ MQ + PNL + EGS ED+LLDG+A++G+V ADG EIA + VVITTGTFLRGKCYIG Sbjct: 7 GVDVVVIGGGHAGCEAAAASARTGARTVLLTQKKDTIGELSCNPSIGGIGKGHLVREVDALDGLMGRVIDEAGIHFRMLNQRKGPAVRGPRAQADRDIYRSTMQAFLQQQPNLEIMEGSAEDLLLDGDAVRGVVCADGAEIAARAVVITTGTFLRGKCYIGD 168
BLAST of mRNA_L-elsbetiae_contig986.18801.1 vs. uniprot
Match: A0A6V1QVZ8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QVZ8_HETAK) HSP 1 Score: 239 bits (609), Expect = 2.810e-64 Identity = 117/166 (70.48%), Postives = 142/166 (85.54%), Query Frame = 3 Query: 564 VPTGVDVVVVGGGHAGCEAAAASARAGARTVLVTQKKDTIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMNGTPNLSVFEGSVEDVLLD-GEAIKGIVTADGTEIACKGVVITTGTFLRGKCYIGQ 1058 +P+ +V+V+GGGHAGCEAAAA+AR GA+T+L+TQKK+TIGELSCNPSIGGIGKGH+V+E+DALDG+MGRVID AGIHFRMLNRRKG AVRGPRAQADRDLY+ AMQ + TPNL + E S ED++L G ++G+VTA+G IA VVITTGTFLRG CY+G+ Sbjct: 52 IPSQAEVIVIGGGHAGCEAAAAAARTGAQTILLTQKKETIGELSCNPSIGGIGKGHLVKEIDALDGLMGRVIDEAGIHFRMLNRRKGQAVRGPRAQADRDLYKAAMQAALAATPNLRIVEASAEDLVLGAGNRVEGVVTAEGARIAAGQVVITTGTFLRGVCYLGR 217
BLAST of mRNA_L-elsbetiae_contig986.18801.1 vs. uniprot
Match: A0A0G4ES60_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ES60_VITBC) HSP 1 Score: 239 bits (609), Expect = 3.890e-64 Identity = 119/166 (71.69%), Postives = 138/166 (83.13%), Query Frame = 3 Query: 567 PTGVDVVVVGGGHAGCEAAAASARAGARTVLVTQKKDTIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMNGTPNLSVFEGSVEDVLLDGEAIKGIVTADGTEIACKGVVITTGTFLRGKCYIGQVG 1064 P DVVV+GGGHAGCEAAA +AR GA TVLVTQ+ DTIGE+SCNPSIGGIGKGH+VRE+DALDG+MG IDRAGIHFR+LNR KGPAVRGPRAQADRDLY+ AMQ ++ PNL + E SVEDVLLDG A++G+ DG +I VV+TTGTFLRGKC+IG+ G Sbjct: 44 PLKADVVVIGGGHAGCEAAAGAARTGADTVLVTQRTDTIGEMSCNPSIGGIGKGHLVREIDALDGLMGVTIDRAGIHFRLLNRSKGPAVRGPRAQADRDLYKEAMQATLSAYPNLRIVEASVEDVLLDGGAVRGVRLGDGRDIEGGRVVVTTGTFLRGKCWIGRQG 209
BLAST of mRNA_L-elsbetiae_contig986.18801.1 vs. uniprot
Match: W7T6E4_9STRA (Glucose-inhibited division protein a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T6E4_9STRA) HSP 1 Score: 238 bits (606), Expect = 2.040e-63 Identity = 117/177 (66.10%), Postives = 145/177 (81.92%), Query Frame = 3 Query: 570 TGVDVVVVGGGHAGCEAAAASARAGARTVLVTQKKDTIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMNGTPNLSVFEGSVEDVLLDGEA--------------IKGIVTADGTEIACKGVVITTGTFLRGKCYIGQ 1058 T DV++VGGGHAGCEAAAASAR GA+TVLVTQK +T+GE+SCNPS+GGIGKGH+VRE+DALDG+MGR+ID+AGIHF++LN RKGPAVRGPRAQADRD YRTAM++E+ TPNL++FEGSVED++LD ++GI TA G ++ VVITTGTFL+GKCY+G+ Sbjct: 88 TSYDVIIVGGGHAGCEAAAASARTGAKTVLVTQKLETVGEMSCNPSVGGIGKGHLVREIDALDGIMGRMIDQAGIHFKILNSRKGPAVRGPRAQADRDRYRTAMRQELAATPNLTLFEGSVEDLVLDEAVGGSGAGGVGGKQMNVRGITTAAGETLSASRVVITTGTFLKGKCYLGK 264
BLAST of mRNA_L-elsbetiae_contig986.18801.1 vs. uniprot
Match: A0A7S2SR14_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR14_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.010e-61 Identity = 115/153 (75.16%), Postives = 130/153 (84.97%), Query Frame = 3 Query: 600 GHAGCEAAAASARAGARTVLVTQKKDTIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMNGTPNLSVFEGSVEDVLLDGEAIKGIVTADGTEIACKGVVITTGTFLRGKCYIGQ 1058 GHAGCEAAAA+AR GARTVLVTQ+ DT+GELSCNPSIGGIGKGH+VREVDALDG+MGR ID + IHFRMLNRRKGPAV GPR+QADR LY+ AMQ + T NL VFEGSVED+LL+GE + GIVT G EI VVITTGTFLRG+CY+G+ Sbjct: 1 GHAGCEAAAAAARTGARTVLVTQRFDTVGELSCNPSIGGIGKGHLVREVDALDGLMGRTIDESSIHFRMLNRRKGPAVWGPRSQADRTLYKAAMQRNIEATANLEVFEGSVEDLLLEGERVTGIVTGAGDEILAGRVVITTGTFLRGRCYLGK 153
BLAST of mRNA_L-elsbetiae_contig986.18801.1 vs. uniprot
Match: A0A7Y2CFP6_9PROT (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A7Y2CFP6_9PROT) HSP 1 Score: 228 bits (582), Expect = 2.430e-61 Identity = 116/166 (69.88%), Postives = 137/166 (82.53%), Query Frame = 3 Query: 570 TGVDVVVVGGGHAGCEAAAASARAGARTVLVTQKKDTIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMNGTPNLSVFEGSVEDVLLDG---EAIKGIVTADGTEIACKGVVITTGTFLRGKCYIGQ 1058 T DV+V+GGGHAGCEAAAA+ARAGART+L T +KDTIGE+SCNP+IGG+GKGH+VREVDALDG+MGR+ID AGI FRMLNR KGPAVRGPRAQADR LYR AMQ + G PNL + E +VED+L D E I G+V+ADG+EI K VV+TTGTFL+G +IG Sbjct: 2 TNYDVIVIGGGHAGCEAAAAAARAGARTLLATHRKDTIGEMSCNPAIGGLGKGHLVREVDALDGLMGRIIDEAGIQFRMLNRSKGPAVRGPRAQADRKLYRKAMQAALAGYPNLDIAEIAVEDLLTDDVSRETIAGVVSADGSEIRAKAVVLTTGTFLKGVIHIGN 167
BLAST of mRNA_L-elsbetiae_contig986.18801.1 vs. uniprot
Match: A0A7S4BB47_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BB47_CHRCT) HSP 1 Score: 223 bits (568), Expect = 1.020e-60 Identity = 117/178 (65.73%), Postives = 138/178 (77.53%), Query Frame = 3 Query: 576 VDVVVVGGGHAGCEAAAASARAGARTVLVTQKKDTIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMNGTPNLSVFEGSVEDVLLDG-----------------EAIKGIVTADGTEIACKGVVITTGTFLRGKCYIGQ 1058 VDV+VVGGGHAGCEAAAA+ARAGA+T+LVTQ DTIGE+SCNPSIGGIGKGH+VREVDALDG+MGRVID AGIHFRMLNRRKGPAV+GPRAQADRD+YRTAMQ + L ++EGSVED+LL+G + G+ TA+G + VVITTGTF+RG +IG+ Sbjct: 95 VDVIVVGGGHAGCEAAAAAARAGAQTLLVTQSIDTIGEMSCNPSIGGIGKGHLVREVDALDGLMGRVIDEAGIHFRMLNRRKGPAVQGPRAQADRDIYRTAMQAALRQVDRLELYEGSVEDLLLEGLPASSNVAASHAAATRTPRVVGVRTAEGAVLHAPRVVITTGTFMRGVVHIGK 272
BLAST of mRNA_L-elsbetiae_contig986.18801.1 vs. uniprot
Match: A0A537REG6_9PROT (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537REG6_9PROT) HSP 1 Score: 218 bits (556), Expect = 1.460e-60 Identity = 110/160 (68.75%), Postives = 129/160 (80.62%), Query Frame = 3 Query: 579 DVVVVGGGHAGCEAAAASARAGARTVLVTQKKDTIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMNGTPNLSVFEGSVEDVLLDGEAIKGIVTADGTEIACKGVVITTGTFLRGKCYIGQ 1058 DV+VVGGGHAGCEAAAA+AR GART L+T K TIGE+SCNP+IGG+GKGH+VRE+DALDG+MGRV D AGI FR+LNR KGPAV+GPRAQADR LYR AMQ + TPNL V EG+VED+L+ + GIVTADG I VV+TTGTFLRG + G+ Sbjct: 7 DVIVVGGGHAGCEAAAAAARMGARTALITHKFATIGEMSCNPAIGGLGKGHLVREIDALDGLMGRVADAAGIQFRLLNRSKGPAVQGPRAQADRKLYRAAMQAAIRATPNLEVIEGAVEDLLVQNGSAAGIVTADGRAIRAGSVVLTTGTFLRGLIHRGE 166
BLAST of mRNA_L-elsbetiae_contig986.18801.1 vs. uniprot
Match: A0A7Y6Y181_9PROT (tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7Y6Y181_9PROT) HSP 1 Score: 214 bits (546), Expect = 2.010e-60 Identity = 107/164 (65.24%), Postives = 134/164 (81.71%), Query Frame = 3 Query: 579 DVVVVGGGHAGCEAAAASARAGARTVLVTQKKDTIGELSCNPSIGGIGKGHIVREVDALDGVMGRVIDRAGIHFRMLNRRKGPAVRGPRAQADRDLYRTAMQEEMNGTPNLSVFEGSVEDVLLDGEAIK----GIVTADGTEIACKGVVITTGTFLRGKCYIGQ 1058 DV+V+GGGHAGCEAAAASAR GA T+L+T K +TIGE+SCNP+IGG+GKGH+VRE+DALDGVMG V DR+GI FR+LNRRKGPAV+GPR Q+DR LYR AMQE + PNL++ G+VED+++D + K GI+TADG EI V++TTGTFLRG +IG+ Sbjct: 5 DVIVIGGGHAGCEAAAASARMGANTLLITHKPETIGEMSCNPAIGGLGKGHLVREIDALDGVMGIVADRSGIQFRLLNRRKGPAVQGPRCQSDRKLYREAMQEILFDYPNLTIEAGAVEDLMIDRTSDKPKVTGIITADGKEIPAASVILTTGTFLRGLIHIGE 168 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig986.18801.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig986.18801.1 >prot_L-elsbetiae_contig986.18801.1 ID=prot_L-elsbetiae_contig986.18801.1|Name=mRNA_L-elsbetiae_contig986.18801.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=483bp MRQSTLCVGYPMRHSSTRKRRERPVAISSSPSSPCSYSATSPSVPLPRLVback to top mRNA from alignment at L-elsbetiae_contig986:21489..25808+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig986.18801.1 ID=mRNA_L-elsbetiae_contig986.18801.1|Name=mRNA_L-elsbetiae_contig986.18801.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4320bp|location=Sequence derived from alignment at L-elsbetiae_contig986:21489..25808+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig986:21489..25808+ >mRNA_L-elsbetiae_contig986.18801.1 ID=mRNA_L-elsbetiae_contig986.18801.1|Name=mRNA_L-elsbetiae_contig986.18801.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2898bp|location=Sequence derived from alignment at L-elsbetiae_contig986:21489..25808+ (Laminarionema elsbetiae ELsaHSoW15)back to top |