prot_L-elsbetiae_contig986.18799.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig986.18799.1
Unique Nameprot_L-elsbetiae_contig986.18799.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length626
Homology
BLAST of mRNA_L-elsbetiae_contig986.18799.1 vs. uniprot
Match: A0A6H5L6M1_9PHAE (UBA domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M1_9PHAE)

HSP 1 Score: 214 bits (546), Expect = 1.900e-55
Identity = 172/350 (49.14%), Postives = 194/350 (55.43%), Query Frame = 0
Query:  219 FGKRVEGCGRTGSAGSSGAEVAT-----LAAALRQTPTAFTSLLLRELVLRHGSAVCPP----------------------------------ALTLPLLHRGIFRFDQRERSSSHAARPLMSVPSDTVAPRPGPAAGVGSTMLVLQAQPQAVVGGARALGPTAVSFLRDALLPPPSPRTGDSTAKAPIVRRGTAEERRRRNEALRAAFPGKVWAVARVLLALCERAGEGRGRVIAELCSALH----RISAASAERGSAVAVDRREE------WALREWGELAVGLAAPRAVRAAGTDYGNWTFALDVVRALVDNGVMPALTQALVGM------VAASGAALVRPSEMLT 513
             G+RVE  GRT S GS+GA  AT      AAA  Q  T   SLLL EL+LRH                                          L LP     I RF QRERSSS+AAR L  VP D VAPRPG AAGV   + +LQAQ  AV G A A  PT V+FL   LLP  SPR GD+ AK  +     AEERR+R +AL A    K  A AR+LLALC RAGEGR RV+AEL SAL     R +     RGS VA +RR++      WAL+ WGELA+GLAAPRAV A G DYGN T A DVVRA+ D G +PALT+AL  M        A GAALVRP EMLT
Sbjct: 1301 IGERVERDGRTDSGGSNGAGAATGGSGSFAAAPHQNRTTIMSLLLSELILRHEGVXXXXXXXXXXXXXXXXXXXXGTTEFLGVANLLELLSDLVLHLPACATSIHRFGQRERSSSYAARLLAPVPGDAVAPRPGSAAGVARALRLLQAQRHAVAGAA-APSPTVVAFLLHVLLP--SPRAGDTAAKGIV----DAEERRKR-KALSALQGRKAQAAARLLLALCARAGEGRRRVLAELYSALSCNADRGTGGGGGRGS-VANERRDQRTDREMWALQAWGELALGLAAPRAVHAVGNDYGNQTLAWDVVRAVTDIGAVPALTRALARMDLNHSRAPACGAALVRPLEMLT 1641          
BLAST of mRNA_L-elsbetiae_contig986.18799.1 vs. uniprot
Match: A0A7S2K3E8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K3E8_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 5.520e-8
Identity = 53/139 (38.13%), Postives = 78/139 (56.12%), Query Frame = 0
Query:  396 ARVLLALCERAGEGRGRVIAELCSALHRISAASA---ERGSAVAVD------RREEWALREWGELAVGLAAPRAVRAAGTDYGNWTFALD------VVRALVDNGVMPALTQAL------VGMVAASGAALVRPSEMLT 513
            AR+L+ LC RAGEGR RV+++L SAL   S+ ++   E+G + A+        RE WAL+ WGEL +GL+APR+        G  TF  D      VV+ +++ GV  AL + +      V M + +  AL+RP E+ T
Sbjct:  387 ARLLIILCARAGEGRRRVVSDLASALGGSSSPASDGKEKGKSKALQLSLSQSEREMWALQSWGELCIGLSAPRS--------GGITFDSDAALSWEVVKLMLEFGVAHALMEGIKRIDLNVPMASNAAGALLRPLEVFT 517          
BLAST of mRNA_L-elsbetiae_contig986.18799.1 vs. uniprot
Match: A0A7S2QUL7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QUL7_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 6.740e-7
Identity = 42/101 (41.58%), Postives = 59/101 (58.42%), Query Frame = 0
Query:  396 ARVLLALCERAGEGRGRVIAELCSALHRISAASAERGSAVAVDRREEWALREWGELAVGLAAPRAV--RAAGTDYGNWTFALDVVRALVDNGVMPALTQAL 494
            AR+++ALC R GEGR RVI E+C    +        G   AV  RE WAL  WGEL +GL +PR+   +A  +DY + T A ++VR + + G++  L  AL
Sbjct: 1147 ARLIIALCARPGEGRRRVIHEICCCFRKRQ--GGVEGGEQAV--RELWALTSWGELVLGLMSPRSGSGQAKESDYSSSTLAYEIVRLMGEVGLVGCLMDAL 1243          
BLAST of mRNA_L-elsbetiae_contig986.18799.1 vs. uniprot
Match: A0A7S4MCB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCB0_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 1.190e-6
Identity = 65/201 (32.34%), Postives = 93/201 (46.27%), Query Frame = 0
Query:  342 TAVSFLRDALLPPP----SPRTGDSTAKAPIVRRGTAEERRRRNEALRAAFPGKVWAVARVLLALCERAGEGRGRVIAELCSALH-------------------RISAASAERGSAVAVDRREEWALREWGELAVGLAAPRAVRAAGTDYGNWTFALDVVRALVDNGVMPALTQALVGM------VAASGAALVRPSEMLT 513
            TAVSFL   LLP P    +P      A A +   G+A +      A            AR+L+AL  RAGEGR RVIA+L  AL                       AA AE   +   +  E WAL+ WGEL +G+AAPR+   +     N + + +VV+ ++++G+  AL  A+  +       +   AAL+RP E+ T
Sbjct:  869 TAVSFLLHELLPRPRSPVAPARRGRGADAELPLGGSAVDAETEERATAYMKVKISQTAARLLVALVARAGEGRRRVIADLSFALGGGGFCGGVDVSSLMPQSPAAKRAADAEGSGSQRDEDHELWALQSWGELCIGIAAPRSTGISQDT--NASLSWEVVKLMLESGIAHALLAAVRRIRLHHPNASRCAAALIRPLEVFT 1067          
BLAST of mRNA_L-elsbetiae_contig986.18799.1 vs. uniprot
Match: A0A7S2W403_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W403_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.330e-6
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 0
Query:  396 ARVLLALCERAGEGRGRVIAELCSALHRISAASAERGSAVAV------DRREEWALREWGELAVGLAAPRAVRAAGTDYGNWTFALDVVRALVDNGVMPALTQALVG------MVAASGAALVRPSEMLT 513
            AR+L+AL  RAGEGR RVI++L  AL           S  +       D +E WAL+ WGEL +GLAAPR+  ++     N + + +VVR +++ G+  AL   +        + A + AAL+RP E+ T
Sbjct:   76 ARLLVALVARAGEGRRRVISDLALALSGGGQCHLNLDSCKSEILCNRDDDKEMWALQSWGELCIGLAAPRS--SSINQDNNSSLSFEVVRVMLECGMAHALMHGIKKVRLHHPLAATTAAALLRPLELFT 203          
BLAST of mRNA_L-elsbetiae_contig986.18799.1 vs. uniprot
Match: A0A7S4S0Y2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S0Y2_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.470e-5
Identity = 43/124 (34.68%), Postives = 71/124 (57.26%), Query Frame = 0
Query:  396 ARVLLALCERAGEGRGRVIAELCSALHRISAASAERGSAVAVDRREEWALREWGELAVGLAAPRAVRAAGTDYGNWTFALDVVRALVDNGVMPALTQALVG------MVAASGAALVRPSEMLT 513
            AR+L+AL  RAGEGR RV+ +L  AL   ++ S+    +   + +E WAL  WGEL +GLAAPR+   +   + + ++  +VV+ +++ G+  AL Q +        M     +AL+RP E+ +
Sbjct:  673 ARLLVALVARAGEGRRRVVTDLACALSGGTSHSSPTVKSNENEEKEMWALLSWGELCIGLAAPRSSSISQDHHQSLSY--EVVKLMLECGMAHALMQGVQRVKLHHPMAPTVASALLRPLEVFS 794          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig986.18799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L6M1_9PHAE1.900e-5549.14UBA domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A7S2K3E8_9STRA5.520e-838.13Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2QUL7_9STRA6.740e-741.58Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
A0A7S4MCB0_9STRA1.190e-632.34Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2W403_9STRA1.330e-636.92Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S4S0Y2_9STRA1.470e-534.68Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 26..46

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig986contigL-elsbetiae_contig986:4357..10691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig986.18799.1mRNA_L-elsbetiae_contig986.18799.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig986 4357..10691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig986.18799.1 ID=prot_L-elsbetiae_contig986.18799.1|Name=mRNA_L-elsbetiae_contig986.18799.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=626bp
MDGFQGAPLGEMEPDLGISEVGRPSLSRVHEQMDGLQRELDKREQRCIAE
SKATAAAIAAAMQQERGDDRDRHDRQLCETKETRTADVEALQEGLQASKV
RTWELEARVSGLEGQVSGLKAQVLALVAENDGLSRTMDSLAVPRRAEFAA
GRHGGGDDDTGVDAVRRRRLELMPSLPQLVLDAAGGNSPPTLRLHSLPMN
AHLPVLGGGQRATVVAAGFGKRVEGCGRTGSAGSSGAEVATLAAALRQTP
TAFTSLLLRELVLRHGSAVCPPALTLPLLHRGIFRFDQRERSSSHAARPL
MSVPSDTVAPRPGPAAGVGSTMLVLQAQPQAVVGGARALGPTAVSFLRDA
LLPPPSPRTGDSTAKAPIVRRGTAEERRRRNEALRAAFPGKVWAVARVLL
ALCERAGEGRGRVIAELCSALHRISAASAERGSAVAVDRREEWALREWGE
LAVGLAAPRAVRAAGTDYGNWTFALDVVRALVDNGVMPALTQALVGMVAA
SGAALVRPSEMLTGSGDSHGPLGSLSFGGTPLQDTSAYAQEDIKIIVQPG
SARNTADPAARRLQGVAAAVGGMVASVGGVTNEGRWTEDGQPPTSAEDRA
VMPMMAEAEQAIVASSPPSQEVGHHA
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