mRNA_L-elsbetiae_contig985.18794.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig985.18794.1 vs. uniprot
Match: D7FLL5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL5_ECTSI) HSP 1 Score: 273 bits (698), Expect = 3.720e-92 Identity = 139/154 (90.26%), Postives = 149/154 (96.75%), Query Frame = 1 Query: 1 YYFLCLNGFESTMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSEDRKFGHAIVAGIDRYPRRVTKAMSKEKIKKRTKMKPFIKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPADVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFDKLRF 462 ++ +CL FE+ MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSE+RKFGHAIVAGIDRYPRRVTKAMSK+KIKKRTK+KPF+KYVNVNHIMPTRYQVDIDLKKAVDE+AIKASP DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFF+KLRF Sbjct: 9 HFPVCLAWFEAIMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSENRKFGHAIVAGIDRYPRRVTKAMSKDKIKKRTKLKPFVKYVNVNHIMPTRYQVDIDLKKAVDETAIKASPTDVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFEKLRF 162
BLAST of mRNA_L-elsbetiae_contig985.18794.1 vs. uniprot
Match: A0A836CBN1_9STRA (60S ribosomal protein L27 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN1_9STRA) HSP 1 Score: 209 bits (531), Expect = 5.310e-67 Identity = 104/142 (73.24%), Postives = 123/142 (86.62%), Query Frame = 1 Query: 37 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSEDRKFGHAIVAGIDRYPRRVTKAMSKEKIKKRTKMKPFIKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPADVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFDKLRF 462 MGIIK+GKVV++LAGRYAGRKAIVVK +D GS DRKF HA+VAGIDRYPR+VTK+MSK K+ KR+K KPF+K+VNVNH+MPTRY DI+LK V+ESA KAS +VRKAV+K+FEERYLNQ +KSEKKA+G KYFF KL F Sbjct: 1 MGIIKAGKVVIMLAGRYAGRKAIVVKAYDSGSADRKFTHALVAGIDRYPRKVTKSMSKVKVAKRSKCKPFVKFVNVNHLMPTRYTADIELKTVVEESAFKASRPEVRKAVKKVFEERYLNQGQIKSEKKASGSKYFFAKLAF 142
BLAST of mRNA_L-elsbetiae_contig985.18794.1 vs. uniprot
Match: A0A7S4SWS4_9DINO (60S ribosomal protein L27 (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SWS4_9DINO) HSP 1 Score: 197 bits (500), Expect = 2.880e-62 Identity = 97/138 (70.29%), Postives = 118/138 (85.51%), Query Frame = 1 Query: 31 STMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSEDRKFGHAIVAGIDRYPRRVTKAMSKEKIKKRTKMKPFIKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPADVRKAVRKIFEERYLNQKDVKSEKKATGVKYF 444 S MGIIKSGKVVV+LAGRYAGRKA+VVK +D+GS DRKF HA+V GIDRYP++VTK M+K KI KR+KMKPF+K +N+NH+MPTRY VD+DLKK VDE+A K + + RK V+KIFE+RYLNQ KSEKKA+GV+YF Sbjct: 6 SNMGIIKSGKVVVVLAGRYAGRKAVVVKTYDDGSIDRKFSHAMVVGIDRYPKKVTKGMTKTKITKRSKMKPFLKCINLNHLMPTRYSVDMDLKKTVDEAAFKEAKKETRKTVKKIFEDRYLNQASGKSEKKASGVQYF 143
BLAST of mRNA_L-elsbetiae_contig985.18794.1 vs. uniprot
Match: M4B173_HYAAE (Uncharacterized protein n=21 Tax=Oomycota TaxID=4762 RepID=M4B173_HYAAE) HSP 1 Score: 197 bits (500), Expect = 2.970e-62 Identity = 99/144 (68.75%), Postives = 119/144 (82.64%), Query Frame = 1 Query: 37 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSEDRKFGHAIVAGIDRYPRRVTKAMSKEKIKKRTKMKPFIKYVNVNHIMPTRYQVDIDLKKAVDESAI--KASPADVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFDKLRF 462 MGI+K+GKVVVLL GR+AGRKAIVVK FDEG DRKFGHAIVAGIDRYPR+VT++MSK K+K+R+K+KPF+KYVN NHIMPTRY DIDLKK +D+ + + + RK ++K+FEERYLNQ KSEKKA GV +FF KLRF Sbjct: 1 MGIVKNGKVVVLLNGRFAGRKAIVVKTFDEGRGDRKFGHAIVAGIDRYPRKVTRSMSKAKVKQRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVLGNPETRIESRKTIKKVFEERYLNQGSCKSEKKAAGVSFFFKKLRF 144
BLAST of mRNA_L-elsbetiae_contig985.18794.1 vs. uniprot
Match: A0A024GB05_9STRA (Uncharacterized protein n=3 Tax=Albugo TaxID=65356 RepID=A0A024GB05_9STRA) HSP 1 Score: 197 bits (500), Expect = 7.870e-62 Identity = 100/144 (69.44%), Postives = 119/144 (82.64%), Query Frame = 1 Query: 37 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSEDRKFGHAIVAGIDRYPRRVTKAMSKEKIKKRTKMKPFIKYVNVNHIMPTRYQVDIDLKKAVDESAIKA--SPADVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFDKLRF 462 MGIIK+GKVVVLL GR+AGRKAIVVK FDEG DRK+G AIVAGIDRYPR+VT++M K KIKK++K+KPF+KYVN NH+MPTRY VDIDLKK +D+ + S + RK ++K+FEERYLNQ D SEKKATGV +FF KLRF Sbjct: 31 MGIIKNGKVVVLLNGRFAGRKAIVVKAFDEGVGDRKYGFAIVAGIDRYPRKVTRSMGKNKIKKKSKIKPFVKYVNYNHMMPTRYIVDIDLKKVLDDDVMSKPESRVETRKTIKKVFEERYLNQADCSSEKKATGVSFFFKKLRF 174
BLAST of mRNA_L-elsbetiae_contig985.18794.1 vs. uniprot
Match: A0A2D4BF17_PYTIN (60S ribosomal protein L27 n=3 Tax=Eukaryota TaxID=2759 RepID=A0A2D4BF17_PYTIN) HSP 1 Score: 194 bits (493), Expect = 3.460e-61 Identity = 98/145 (67.59%), Postives = 122/145 (84.14%), Query Frame = 1 Query: 37 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSEDRKFGHAIVAGIDRYPRRVTKAMSKEKIKKRTKMKPFIKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPA---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFDKLRF 462 MGI+K+GKVV++L GR+AGRKA+VVK DEG DRKFGHAIVAGIDRYPR+VT+AMSK K+KK++K+KPFIK VN++H+MPTRY VDIDLKK +D+ + A+P + RK ++K+FEERYLNQ VKSEKKA GV +FF KLRF Sbjct: 1 MGIVKNGKVVIMLNGRFAGRKAVVVKTHDEGHGDRKFGHAIVAGIDRYPRKVTRAMSKTKLKKKSKVKPFIKVVNLSHVMPTRYVVDIDLKKVLDDEVL-ANPESRIESRKTIKKVFEERYLNQSAVKSEKKAAGVSFFFKKLRF 144
BLAST of mRNA_L-elsbetiae_contig985.18794.1 vs. uniprot
Match: A0A6U1L5V7_9STRA (60S ribosomal protein L27 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1L5V7_9STRA) HSP 1 Score: 194 bits (492), Expect = 4.600e-61 Identity = 93/142 (65.49%), Postives = 117/142 (82.39%), Query Frame = 1 Query: 37 MGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSEDRKFGHAIVAGIDRYPRRVTKAMSKEKIKKRTKMKPFIKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPADVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFDKLRF 462 MG+IKSGKVV++L GR+AGRKAIVVK +D+G+ +R+F HA+VAGIDR PR+VT++MSKEKI+KRTKMKPF+KYVN H+MPTRY VD+DLKK VDES +K A+ RKA++K+FEERY Q K EKKA G YF+ K+ F Sbjct: 1 MGVIKSGKVVIVLQGRFAGRKAIVVKAYDDGNAERRFAHAMVAGIDRAPRKVTRSMSKEKIQKRTKMKPFLKYVNYTHLMPTRYVVDLDLKKIVDESGLKEGKAEARKAIKKVFEERYHQQSSAKXEKKAAGTMYFYKKMAF 142
BLAST of mRNA_L-elsbetiae_contig985.18794.1 vs. uniprot
Match: A0A0W8DKH9_PHYNI (Platelet-activating factor acetylhydrolase IB subunit alpha n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0W8DKH9_PHYNI) HSP 1 Score: 193 bits (491), Expect = 1.720e-60 Identity = 99/142 (69.72%), Postives = 117/142 (82.39%), Query Frame = 1 Query: 46 IKSGKVVVLLAGRYAGRKAIVVKPFDEGSEDRKFGHAIVAGIDRYPRRVTKAMSKEKIKKRTKMKPFIKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPA---DVRKAVRKIFEERYLNQKDVKSEKKATGVKYFFDKLRF 462 +K+GKVVVLL GR+AGRKAIVVK FDEG DRKFGHAIVAGIDRYPR+VT+AM K K+KKR+K+KPF+KYVN NHIMPTRY DIDLKK +D+ + A+P + RK ++K+FEERYLNQ KSEKKA GV +FF KLRF Sbjct: 32 VKNGKVVVLLNGRFAGRKAIVVKTFDEGKGDRKFGHAIVAGIDRYPRKVTRAMGKNKLKKRSKVKPFVKYVNYNHIMPTRYVADIDLKKVLDDEVL-ANPESRIESRKTIKKVFEERYLNQAACKSEKKAAGVSFFFKKLRF 172
BLAST of mRNA_L-elsbetiae_contig985.18794.1 vs. uniprot
Match: A0A1V9Z0C3_9STRA (60S ribosomal protein L27 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z0C3_9STRA) HSP 1 Score: 188 bits (478), Expect = 8.050e-59 Identity = 93/141 (65.96%), Postives = 116/141 (82.27%), Query Frame = 1 Query: 46 IKSGKVVVLLAGRYAGRKAIVVKPFDEGSEDRKFGHAIVAGIDRYPRRVTKAMSKEKIKKRTKMKPFIKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPADV--RKAVRKIFEERYLNQKDVKSEKKATGVKYFFDKLRF 462 +K+GKVVV+L GRYAGRKAIVVK +DEG+ DRKFGHAIVAGIDRYPR++T++M K+K+ KR+K+KPF+K +N NHIMPTRY DIDLKK +DE + + A V RK ++K+FE+RYLNQ KSEKKA GV +FF KLRF Sbjct: 10 VKNGKVVVVLNGRYAGRKAIVVKAYDEGNGDRKFGHAIVAGIDRYPRKITRSMGKKKVAKRSKIKPFVKAINYNHIMPTRYVADIDLKKVLDEEVLSKAEARVESRKTIKKVFEDRYLNQAACKSEKKAAGVSFFFKKLRF 150
BLAST of mRNA_L-elsbetiae_contig985.18794.1 vs. uniprot
Match: A0A397BII5_9STRA (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A397BII5_9STRA) HSP 1 Score: 188 bits (478), Expect = 9.760e-59 Identity = 93/141 (65.96%), Postives = 115/141 (81.56%), Query Frame = 1 Query: 46 IKSGKVVVLLAGRYAGRKAIVVKPFDEGSEDRKFGHAIVAGIDRYPRRVTKAMSKEKIKKRTKMKPFIKYVNVNHIMPTRYQVDIDLKKAVDESAIKASPADV--RKAVRKIFEERYLNQKDVKSEKKATGVKYFFDKLRF 462 +K+GKVVVLL GRYAGRKAIVVK +DEG DRKFGHAIVAGIDRYPR++T++M K+K+ KR+K+KPF+KYVN NHI+PTRY DI+LKK VD+ + A + RK ++K+FE+RYLNQ KSEKKA GV +FF KLRF Sbjct: 16 VKNGKVVVLLNGRYAGRKAIVVKTYDEGHGDRKFGHAIVAGIDRYPRKITRSMGKKKVTKRSKIKPFVKYVNYNHILPTRYVADIELKKVVDDEVLATPEARIESRKIIKKVFEDRYLNQGATKSEKKAAGVSFFFKKLRF 156 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig985.18794.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig985.18794.1 >prot_L-elsbetiae_contig985.18794.1 ID=prot_L-elsbetiae_contig985.18794.1|Name=mRNA_L-elsbetiae_contig985.18794.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp YYFLCLNGFESTMGIIKSGKVVVLLAGRYAGRKAIVVKPFDEGSEDRKFGback to top mRNA from alignment at L-elsbetiae_contig985:11096..15584- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig985.18794.1 ID=mRNA_L-elsbetiae_contig985.18794.1|Name=mRNA_L-elsbetiae_contig985.18794.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4489bp|location=Sequence derived from alignment at L-elsbetiae_contig985:11096..15584- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig985:11096..15584- >mRNA_L-elsbetiae_contig985.18794.1 ID=mRNA_L-elsbetiae_contig985.18794.1|Name=mRNA_L-elsbetiae_contig985.18794.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=930bp|location=Sequence derived from alignment at L-elsbetiae_contig985:11096..15584- (Laminarionema elsbetiae ELsaHSoW15)back to top |