mRNA_L-elsbetiae_contig9840.18789.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig9840.18789.1
Unique NamemRNA_L-elsbetiae_contig9840.18789.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: D7FLF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF3_ECTSI)

HSP 1 Score: 407 bits (1046), Expect = 1.180e-130
Identity = 201/230 (87.39%), Postives = 216/230 (93.91%), Query Frame = 3 
Query:  906 RLLHQLARQFPDVGRVKVDKFGNIIGGVNPFEGTDIKLEDQPKVGDDGEEFPELAGVIAGMDDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGDN 1595
            RL  +LAR+FPD+GRVKVDKFGNI+GGVNPFEGTD+KLEDQP   DD ++FPE+AGVIAGMDDPADAPWRLEAEKIVR+QVQACGL CYDILWTFHRLEVTVTR EGDGP+EEAAYVDSDKLM AIK VNAALE REEELFVLGRHELVVATPGAKD+LTTD+QFKAYKGFE+IVKAGGPFK+KR+LKGKLLERTFDELMIMK GRKVRIPLALVDEVRLP ALVEAGD 
Sbjct:  131 RLAEELARKFPDIGRVKVDKFGNIVGGVNPFEGTDVKLEDQPIPDDDEKDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDE 360
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BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A836C944_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C944_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.600e-77
Identity = 134/228 (58.77%), Postives = 173/228 (75.88%), Query Frame = 3 
Query:  918 QLARQFPDVGRVKVDKFGNIIGGVNPFEGTDIKLE-DQPKVGDDGEEFPELAGVIAGMDDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGDNF 1598
            ++ +Q+PD   V VD  GN+IGGV+P+   +  LE  +P V    +E+PE+AG   GMDDP DAPWR EAE+I+R +V+  GL CYDI+W+FH+LEVTVTR +     EEA YVDSD LM AI+ VN ALE+ EE L+VLGRHEL++ATPGAKDILTTDR+FKA+KGF+++V  G     +R++ GKL ERTFDEL++M+ GRKVRIPLALVDEVRLP A +E G+ +
Sbjct:  144 EVLQQYPDAPIVLVDDMGNVIGGVDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGEQW 371
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BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A4D9D4Q5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Q5_9STRA)

HSP 1 Score: 136 bits (342), Expect = 5.880e-31
Identity = 78/192 (40.62%), Postives = 108/192 (56.25%), Query Frame = 3 
Query: 1044 DGEEFPELAGVIAGMDDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVTR-----VEGDGP-VEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLK---GKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGD 1592
            D +  PE  G   GMDDP DAPWRL+AE+++R  V   G   YD+ W  H + V +TR     VE +G  V +A  + SD+++   + V  AL   +  L VL R  L V TPGAKD+LTT+R+F+A++G+E+ V    P           G+LLER     ++   G+ V IP  +V EVRLP A+ EA D
Sbjct:  113 DWDNIPEYGGEFLGMDDPLDAPWRLQAEEVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDGGNVESEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRVLQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 304
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BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: W7TJE5_9STRA (Ribosome maturation factor rimp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJE5_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.650e-29
Identity = 77/192 (40.10%), Postives = 106/192 (55.21%), Query Frame = 3 
Query: 1044 DGEEFPELAGVIAGMDDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVTR-----VEGDGP-VEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLK---GKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGD 1592
            D +  PE  G   GMDDP DAPWRL AE ++R  V   G   YD+ W  H + V +TR     VE +G  V +A  + SD+++   + V  AL   +  L +L R  L V TPGAKD+LTT+R+F+A++G+E+ V    P           G+LLER     ++   G+ V IP  +V EVRLP A+ EA D
Sbjct:  223 DWDNIPEYGGEFLGMDDPLDAPWRLHAEDVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDVGNVENEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRILQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADD 414
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BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S2SW06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW06_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.790e-26
Identity = 73/178 (41.01%), Postives = 107/178 (60.11%), Query Frame = 3 
Query: 1071 GVIAGMDDPADAPWRLEAEKIVREQVQA-CGLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGP--FKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGDN 1595
            G++ G+DDP D  WRL+AE++VR  V+   G+  YD+ W    L+V +     +   +E   VD   +  A + +  ALE  +EEL +L RHEL V++ GAK+IL ++R+F+A+KGF+++VK   P    ++  L GKL+ R   E  I   GR VRIP  LV+EVRLP A  E  +N
Sbjct:  124 GIMNGLDDPRDVFWRLKAEELVRGAVRPLAGVRIYDVCWNIATLQVLL-----EQETDEGGAVDLKVVETAHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEANEEPVEN 296
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BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S2PI76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PI76_9STRA)

HSP 1 Score: 108 bits (271), Expect = 5.240e-23
Identity = 69/210 (32.86%), Postives = 104/210 (49.52%), Query Frame = 3 
Query:  987 VNPFEGTDIKLEDQPKVGDDGEEFPELAGVIAGMDDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVT--------------------------RVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRIP 1538
            ++P +  ++K ++Q          P   G   G DDP DAPWR+E E+I+R+  ++ G    D+ W      VT++                          R E D  V E A   S   ++A   + A  E  + +L VL RHE++V +PG  ++L T RQF A+KGF++IV+   P    R+L+GKLLERT  +  I + G+KV IP
Sbjct:   18 IDPEDVEELKYKEQAP----NPAVPWRRGDPDGCDDPMDAPWRIEGEQIIRDAAESVGAVVEDVTWGMAMCTVTISDTTGVKKDTSEYLEERKKRDDEYPWMREERDAVVTEDAVDMSGVGVVAGTIIEALQEAEDRDLDVLSRHEIIVTSPGVSNVLETQRQFDAFKGFDVIVQTIDPLGSNRRLEGKLLERTALDTFITQKGKKVTIP 223
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BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S1DE94_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE94_CYCTE)

HSP 1 Score: 103 bits (256), Expect = 4.560e-22
Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 3 
Query: 1215 RVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAG 1589
            R++     + A  VD+ K+ +  K +   L+ +E  L +L RHEL++ATPGA D L T RQF AY+GF++IV+   PF   R L GKL+ER   +L+I K GR V IPL  V  VRLP A  E G
Sbjct:    5 RLQSYNLSDGAMVVDTSKISVIAKYILKGLDSQEHRLRILDRHELILATPGAPDTLETQRQFDAYRGFDVIVETVDPFNSNRVLTGKLVERNSMDLIIRKKGRMVTIPLNFVSSVRLPPAKREKG 129
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BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S1TZY1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY1_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.200e-20
Identity = 72/193 (37.31%), Postives = 103/193 (53.37%), Query Frame = 3 
Query: 1071 GVIAGMDDPADAPWRLEA----EKIVREQVQACGLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEEL---FVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVK----------AGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGDNF 1598
            G   GMDDP DAPWRLEA    E++V+E+         D+LW F  +++TVT  E       +A ++     +  + ++  L   E EL     L  H L V TPGA +++TT  QF+AYKGF++ V           AG P K    L G L  RT +E+ + + GR V++P+A+V EVRLP   +E GD +
Sbjct:   96 GPALGMDDPLDAPWRLEAAAEIEELVKEKYP--DAQAVDVLWAFSNVQITVTPKEDANVPLSSAVIE-----MLTRAISDDLFPAEPELAHDHWLTMHALSVCTPGASNVITTQEQFEAYKGFQVDVVTLGMPKSDGFAGVPGK---TLTGTLHGRTTEEVHLNQKGRIVKVPIAMVSEVRLPEPELENGDKW 278
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BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S2SV25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV25_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.970e-19
Identity = 62/160 (38.75%), Postives = 93/160 (58.13%), Query Frame = 3 
Query: 1125 EKIVREQVQA-CGLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGP--FKRKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRLPRALVEAGDN 1595
            +++VR  V+   G+  YD+ W    L+V +     +   +E   VD   +  A + +  ALE  +EEL +L RHEL V++ GAK+IL ++R+F+A+KGF+++VK   P    ++  L GKL+ R   E  I   GR VRIP  LV+EVRLP A  E  +N
Sbjct:   12 QELVRGAVRPLAGVRIYDVCWNIATLQVLL-----EQETDEGGAVDLKVVETAHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEANEEPVEN 166
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BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Match: A0A7S2D135_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D135_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.070e-18
Identity = 58/167 (34.73%), Postives = 89/167 (53.29%), Query Frame = 3 
Query: 1071 GVIAGMDDPADAPWRLEAEKIVREQVQAC-GLACYDILWTFHRLEVTVTRVEGDGPVEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILTTDRQFKAYKGFEIIVKAGGPFK-RKRQLKGKLLERTFDELMIMKDGRKVRIPLALVDEVRL 1565
            G + G+DDP D  WR+  + ++RE +    G++ YDI W    L V +   E    +E+        ++   K +   LE  ++EL +L RH L V++ G  D+LT +RQF  +KGFE+ V     F  R+  + G+L+ R   E  I + GR V+IP   V+EVRL
Sbjct:  114 GDMNGLDDPRDVEWRIRGQDLIREAIAPLNGISVYDITWNIGDLTVFIENEESGVSMED--------IIDCTKAIQDTLEPFDDELEILSRHTLEVSSKGIDDVLTAERQFITFKGFEVAVSTISTFSDRRAPILGRLVGRDVHETTINQKGRMVKIPNFYVEEVRL 272
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9840.18789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF3_ECTSI1.180e-13087.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C944_9STRA1.600e-7758.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D4Q5_9STRA5.880e-3140.63Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TJE5_9STRA1.650e-2940.10Ribosome maturation factor rimp n=1 Tax=Nannochlor... [more]
A0A7S2SW06_9STRA1.790e-2641.01Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2PI76_9STRA5.240e-2332.86Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1DE94_CYCTE4.560e-2245.60Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1TZY1_9STRA1.200e-2037.31Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SV25_9STRA1.970e-1938.75Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2D135_9STRA2.070e-1834.73Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9840contigL-elsbetiae_contig9840:1356..7346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score315.1
Seed ortholog evalue2.1e-83
Seed eggNOG ortholog2880.D7FLF3
Hectar predicted targeting categoryother localisation
EggNOG OGs2E9GY@1,2SFUT@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionRibosome maturation factor RimP, C-terminal
Ec32 orthologEc-12_007950.1
Exons5
Model size2889
Cds size516
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817045.3478138-UTR-L-elsbetiae_contig9840:1355..26431622817045.3478138-UTR-L-elsbetiae_contig9840:1355..2643Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9840 1356..2643 -
1691684005.9640915-UTR-L-elsbetiae_contig9840:1355..26431691684005.9640915-UTR-L-elsbetiae_contig9840:1355..2643Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9840 1356..2643 -
1622817045.414869-UTR-L-elsbetiae_contig9840:5853..58861622817045.414869-UTR-L-elsbetiae_contig9840:5853..5886Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9840 5854..5886 -
1691684006.0176682-UTR-L-elsbetiae_contig9840:5853..58861691684006.0176682-UTR-L-elsbetiae_contig9840:5853..5886Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9840 5854..5886 -
1622817045.4256318-UTR-L-elsbetiae_contig9840:6294..73461622817045.4256318-UTR-L-elsbetiae_contig9840:6294..7346Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9840 6295..7346 -
1691684006.027161-UTR-L-elsbetiae_contig9840:6294..73461691684006.027161-UTR-L-elsbetiae_contig9840:6294..7346Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig9840 6295..7346 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817045.361531-CDS-L-elsbetiae_contig9840:2643..28091622817045.361531-CDS-L-elsbetiae_contig9840:2643..2809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9840 2644..2809 -
1691684005.9796288-CDS-L-elsbetiae_contig9840:2643..28091691684005.9796288-CDS-L-elsbetiae_contig9840:2643..2809Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9840 2644..2809 -
1622817045.372295-CDS-L-elsbetiae_contig9840:3803..39531622817045.372295-CDS-L-elsbetiae_contig9840:3803..3953Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9840 3804..3953 -
1691684005.9892592-CDS-L-elsbetiae_contig9840:3803..39531691684005.9892592-CDS-L-elsbetiae_contig9840:3803..3953Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9840 3804..3953 -
1622817045.3844461-CDS-L-elsbetiae_contig9840:4192..43561622817045.3844461-CDS-L-elsbetiae_contig9840:4192..4356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9840 4193..4356 -
1691684005.9981813-CDS-L-elsbetiae_contig9840:4192..43561691684005.9981813-CDS-L-elsbetiae_contig9840:4192..4356Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9840 4193..4356 -
1622817045.3972487-CDS-L-elsbetiae_contig9840:5817..58531622817045.3972487-CDS-L-elsbetiae_contig9840:5817..5853Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9840 5818..5853 -
1691684006.0079672-CDS-L-elsbetiae_contig9840:5817..58531691684006.0079672-CDS-L-elsbetiae_contig9840:5817..5853Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig9840 5818..5853 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9840.18789.1prot_L-elsbetiae_contig9840.18789.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig9840 2644..5853 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig9840.18789.1

>prot_L-elsbetiae_contig9840.18789.1 ID=prot_L-elsbetiae_contig9840.18789.1|Name=mRNA_L-elsbetiae_contig9840.18789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp
MDDPADAPWRLEAEKIVREQVQACGLACYDILWTFHRLEVTVTRVEGDGP
VEEAAYVDSDKLMLAIKEVNAALEEREEELFVLGRHELVVATPGAKDILT
TDRQFKAYKGFEIIVKAGGPFKRKRQLKGKLLERTFDELMIMKDGRKVRI
PLALVDEVRLPRALVEAGDNF*
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mRNA from alignment at L-elsbetiae_contig9840:1356..7346-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig9840.18789.1 ID=mRNA_L-elsbetiae_contig9840.18789.1|Name=mRNA_L-elsbetiae_contig9840.18789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5991bp|location=Sequence derived from alignment at L-elsbetiae_contig9840:1356..7346- (Laminarionema elsbetiae ELsaHSoW15)
GGTAGGTCTATACGATCCTGCGCGCGAGAGAACGAAGCCATCGGCAACCA
GGCGCTTGCGACAACTTTCGGCATCATATCACTGGTTTTGATGGGAGCAG
AGGTTGGCGAAGAAAGTCGAAGTTTCTGAACTTTCCTCTGCAACTTGTCA
TACCCTCTGTAATGGGAACCCAAAATTGCGATTAAATGTTGCGTAACTTT
GACTTTGCACACAAATCGCCCGATTGGGAGCGAAAGTTTGCAAATTTTGC
AGAGCAAACTGCGGCGAAGCAAAGTTGAGCGGCGGGACTCCAGCCAGTCC
ACGTGAAGCACCTACATACTCCTCCCACGCAACAGATTAACCGCCGGATG
AGTCTGTTCGAAGGACAAGTCGGGATTGTCTGCGATGGCCGCAGCTGTAG
AGTACATGTACATATTTATGTGTATTGAATCTGCGTCAACTGTTTTTTGT
CAAACGAGAGCACGATTGAGGTCTTCCTATAGTAGTTTCGATTGAAAGAC
ATGATGCCAGATTCGATACCAACTCAATTTCCATGCTATTGTAGGACAAT
CTGGCCGGTTTCGCGGTGTGTATGAAGAGGTGTGCTTGCTGCTCACCGTC
GCTCAATAAAAAAAGAAGAATCACGCCTCCGTATTCCACCAGTCCCGCGA
ACAAAACTTCCGTCTTAACTGTTTCTCTTTAAAAAATTTCGTCGCCCCAT
CAATACTGTAGGCGTGCAAATAAAGCGTCACAAATCAAAGTTCCCGACAC
AAAGTTGCGAAAAAACTTTGACTTTCTTGGCAACTTTGCACTCCGATAAA
AACCGGTGTAAAGTAGATGCATCTCCTCCTTCCCTCTTCATTGGTGATGC
ATAAACTAAACACGACAGCTGGAGTTATCGCTGGATAACGTGTTGTCCGC
TTCATCGTTTGCTCCATCAGCTTGCCCGGCAGTTCCCGGATGTTGGCCGA
GTGAAGGTGGACAAGTTTGGTAATATTATCGGAGGTGTCAATCCCTTCGA
AGGCACAGATATTAAGCTGGAGGATCAGCCAAAAGTGGGCGATGATGGAG
AGGTAGGTGCCATTCCACTACTTCCACGTTCATCTAGTCTAATGAAGAAC
CGTTTCGTTTTGCTCACAGTGACTTCGTGTCGAGTAAAAAAAGAAGGCTT
GGTGGCGGAAACATATTTGCTCGTGTTCCCCGCACTATCGTACTAGCACA
GTTGGTGCGCGAGACAAGTTCAAAGTTTGTTAAGAATGAATGGGTTGTGC
CTTCCAAGACAGAACGGCCGCAACGCGTTAAGTTGAAACGGGCTTTGCTG
GGCCTGCTGGCTACGCGTGCCGAACCATCTGTATTCCTTTCGTAAGAGTT
TAATGGCGTCGGCGCCGTTTGTACTGTTGGTCAAAACTGCGTAGTTTTGT
ATCGCGTTTAGTATGGTTATCTCCAACTAAGCCTTTTGCGGTTGCTTATT
GATGCTTCAGGAGTTCCCGGAGCTGGCTGGTGTAATTGCAGGAATGGACG
ATCCCGCGGATGCTCCTTGGAGGCTAGAGGTGAGGTTCAAGTCAGTGGTA
CCCGTTGTGGACACTTGCACGGGCTTCCATTTTTCGATACGCCAATGATT
CTCCTATTTCAGTGTTCGGATGGAGCTCTCGCCTAGTTTTTGCTTTTACA
CCCGGGCAGCCGGGGGCTCCGCGCAATAAAAATGGTCAACAGAGTCCACG
CAGGCGGGAAAATGTCTCTTCCAGCCGCCAGCCTGTGTTTTTCGCTGAGC
TCAACCGAGTCACCACCTGTCAAATGCTGCGTCGTCCTGACAGCAAGAAG
CCAGTGTGGTGCTGCTTTTTGGCTTAATATTTGCCCCTCAGCAGCAAACT
TCACGCGGCTGTCGGCAGTTAAAGGAGTTCACGAAATCGCTCTGTGTTTC
GGCACAAGTGGAGGCACATACGTATAGAATCGTTTCAAGAGGAGCATTTT
TGGATCCCAGGCATGATGGCCACACCAGCGAACACCTAAAGTCATCTCTT
TTCACAGAAGGGAAAAAAATCACGCACGATGAGTGTACCTCCAACGATTT
TGCTTTTTTCCCCAAAAGTTTCCCCAATCTGAACCTTTATCGCTTTGTCG
GCAGCCGAAAACATGCCCGAAAAAGCTTTGCGGTGGTACCAGGCTGTAGA
GGAATCCACACAGATTCCATAGAAGGTTGGAGGAATTTTGGATCTCAACT
ACAGCCGGAGCCCATCGCGAAGTGACTGCCCAACTGGGGCTCCGAATTTC
CGGCGCTCGTGAACATTTTTTTCCACAAAACGTGATACGGAGCCTCCTGC
AACGCGGGTGTTATCGTTTGATAACCACAAATTATACTCACACACTGCGA
GTTTCCGATGTTGTCATGGCGTTCACTGTATCATAAATGGAGATGCTGTG
CCCGTGCGCTTTGGATATCAATGTACCCTCTTCCGTGACTTCGGTGGTGT
CGGGCTGCTTGTTGTGAACGCCAGGTGTGCGCAGTTCGTACCCTCTTGGA
CAGTCATCTAGCTCAATCGGTTGCTTGATCATTTTCGACTCACAACATGC
GCACCCCCCTTTTTTTTTGTGCCATTGCTGAGAGGAGGCACTGCAGTGAT
ATTTGGTGTTTCATCTCCAGGAGCTGACCGAGCCCCTGTTCGGTTTGATA
GCCCGCAGTAAATTCTCGGCGGAGATCAATGAACCGAGGTGCAGCCGGTG
TCGAGGCAGCGAAATCAGATGAAATAGAAGTCTGACGCCGCGTTTGTTGT
TCAGACCGACGGTGCCTCCCTCTCAGCAACAATAGCAAGAATGCGGATAG
CCTATCGTGGGGCCTCGCATACCGATAGCAGCGGAAGATACACACATCCG
AGAAATAACAGCTAGTGTCTGGTATTTGTGTAAACGATGTTGACGGTACT
TGTAGGTAAAAGCTTCCAAGCTATGGACCGTCCACGGCCATGGAGATTAA
CGAAGTTGACTCGTCAACATTTTGCTGCGACACGCTGCAGGCGGAAAAAA
TCGTCCGAGAGCAAGTGCAAGCGTGTGGGCTCGCGTGTTACGACATCCTG
TGGACATTCCACAGGCTGGAGGTTACTGTGACAAGAGTGGAAGGCGACGG
CCCAGTCGAGGAAGCAGCGTATGTGGATAGCGACAAGCTTATGCTGGCAA
TCAAGTGAGCAACCACCGTACGGGAGACAGACTGGCTAGTAATGCAGATA
CGTCTGAACTAAATAGCCAGTTTATCAAAAATAGAATACGCTTGGAAATA
CGGCATCAAGGCATTGTACTGGCGGTCAGGTGGTTAGGGATATTTGCCTC
TGCACGAAACACCAATCACGGAGCTCATCTTTGGTTTCAACATTCAAGTT
GGCGTTCTCTTCCTCAAAATGGAAATTATACACTTGCATGCAGAGAGGTC
AATGCTGCGTTGGAGGAGAGGGAAGAAGAGCTTTTCGTGCTTGGACGGCA
CGAGCTCGTCGTGGCAACGCCTGGAGCAAAAGATATTCTTACAACGGACA
GGCAATTCAAGGCCTACAAGGGATTCGAAATCATCGTGAAAGCGTAAGTC
GCTTGGTTGTTTTTTCACATTAAAAACCGTTCCGATCTCTCCATCCAGTA
CCCACCTCCCTATGGGCGTACTATTCCAACGCTTGATGCGGTCAATTCCC
GTGGTCACAGGCTAACTTATACCTAAAAAAAGGTGCACGAAAATAAAAAC
GGGCCCAAAGGGTTAGCCAAGCGATAAAAATCAAAGACAAATAGTGTGGA
GCCCCCCGCTCCCCTCTACACGCTATGCAAGGTAAAAGCAAAAGTGGACA
AGCCAACATCACCAACCTGGGGTAGAGGGGTAAACTCCGGCTGGTTCTAT
CTTGGTCCCTAACAATGCCAAGGATGTTCCGTCCCCCAGGTTCTCGCCGG
TCAGGCCGGATCTTATGGGAACGGAATTTAGGCTCACAGAAAGACAAACA
AAATGCCAATATTCCGCCGCAAAAGCCAGACGGATTCGTTCGACGGGTTG
TTGTTTTAGACCTTGCCGCGATAGAAACGCGGCCCCTGCCACAACAAAAA
TAGCTGGGAAGACGCTCAGAGGTGTGGAGCATACATCCCTCTTGGTCCGG
TGGCAATCCGTTGGCTATGGACCGAGGCAGCGGCGTTCATGTAGTGTTTT
TTCCATTTCGTTTGTCTTTTTGTGAGCCCCTCCAAAATTTCGTTTGGGCC
TAAATTCCGTTCCCATAAGATCCGGCCTCAGGCCCACAAATCTAGTCCTC
CCCACCGAATTTATCGCCCACATCATAGGAAACAAGATCGAGGCAAAAAA
AAGGACTCCAGGCAAGATAAGAAACAAACACTCATAACTCCTCCGGTGGT
GGTGCAAGATGGTACAGCCGTAGGGGGGAAGGAAATTAGCCTGGTAAAGT
TTCGATTTCCCCCCCGAGCCCGATGCACGGATGCAATGTCGTAGTCTTGC
TCACAGGTATGTATTTATTGGTGATGCATACCTCGTCTTTCTCCTTACGA
TGTGGGCAACTCACTTGAATTCTTCGTCGTTGAGCAGGGGAGGACCATTC
AAGAGGAAGCGACAGCTTAAAGGAAAACTGCTTGAGCGTACGTTCGACGA
GCTGATGATAATGAAGGATGGGCGAAAAGTACGCATTCCCTTGGCGCTTG
TAGACGAAGTTCGCCTGCCGCGAGCGCTTGTGGAAGCCGGAGACAACTTC
TAGTGAGGGATACTAAATAAAGTCTCTCTTTGGCGTGGGCTGGCCTACTT
CGACACCGGACTTAAGAACAGATTTTTGTTGTGTCCCAATTTACGTCGAG
GGTACCGACTGCTTTTTGTTGTACCACCCTCATCCTGTATACGTTTCTAC
GATGCGCGATTGAGGTAACCGTACGATAGAGCGCCTTTTTTTAGGGCACA
TGTCCGTCGACAGACTTGAAACCTCGGTTGCCCAATATACTCAAATACCC
AACCTGAGCGTTTACTAACAACCACGATGTTTTTGCTGTAAGCTCTCTGG
AAAACCGCACCACAATCGCCCTACATATTCGGCTCATCGTCCCGGCGCGG
AGCTGTCGATGTTTTTTTCATTTTTTCGTTGGATACCGAGGTATTTACCA
TACGTACTCGAACGAGGATCGGAGTAATTTGGGATCGTAAATACCAGAGG
TAGACTATAATACAAGAGGTAGTTATTTTCTGTGCTTTGTTTCTGTCCCC
TGGGCACAACAAGATATAGGAGGGGTGATAGCTCCCCCGCTAGTCTTGAC
GGGCTCAACAAGACAAAAATGTCGTCTTTGTGTATGGGACGATATTTGAA
ACTTTGGTGGTGGTGTACAGCGGTGTTGAGTTTTTTTCCAAAGAAGACTC
TGGGCATAAAAAAATACCGACGGCCCGACCAGGTCTAGTATATAGTTTCC
GTTTTCGAAGAGCCGAGTTTGAAGCTTTAGGGCAGCGAAGAGGCGGGCAA
AGTGGTGGGCGGACGGGAGCCAGGCTTGGCGGCGTCGAGCTGCACCCAAG
GCGATCGGGGCAAAAATACAGAACTTTCTTTAACCACCAAAGTCAGGCAT
CAGTTTGTCGAGACGCCGGGTGTGAAATAGGTGGAATCGTATTCCTCCGG
CGGTCGGATGTTGTACCTAAGAAGATGACCTAAGAAGATGACCTCCACCG
CCTCCACAAAGTTGTATTCCGGCGTCGTGATGTTGTCATTGACAACATGA
ACCTAGTGGATCTGTAATATTTTGTATGCAGCTACAAGCTGGTTCACGGA
AATGCCCCCAAGCGTATTCCACAGCGATTTCTCACGCCGTTTTCAAGAGT
TCTGAAATTTTGCACACGTATTCCATCCACCTAAATATACCAGTACGAAA
TAACTACTTGATGGGTCTTTTTGATATTTTGGTTTTCTGACCGGATTTCG
AGGGTCATGGTGGTTTCCGAAAATAAGTGGCCGTTTTTGTGTACACGGAT
GGATTACGTGTGCAAAATTTCAGATCCTAACTTCTAAAAAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig9840:1356..7346-

>mRNA_L-elsbetiae_contig9840.18789.1 ID=mRNA_L-elsbetiae_contig9840.18789.1|Name=mRNA_L-elsbetiae_contig9840.18789.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1032bp|location=Sequence derived from alignment at L-elsbetiae_contig9840:1356..7346- (Laminarionema elsbetiae ELsaHSoW15)
ATGGACGATCCCGCGGATGCTCCTTGGAGGCTAGAGATGGACGATCCCGC
GGATGCTCCTTGGAGGCTAGAGGCGGAAAAAATCGTCCGAGAGCAAGTGC
AAGCGTGTGGGCTCGCGTGTTACGACATCCTGTGGACATTCCACAGGCTG
GAGGTTACTGTGACAAGAGTGGAAGGCGACGGCCCAGTCGAGGAAGCAGC
GTATGTGGATAGCGACAAGCTTATGCTGGCAATCAAGCGGAAAAAATCGT
CCGAGAGCAAGTGCAAGCGTGTGGGCTCGCGTGTTACGACATCCTGTGGA
CATTCCACAGGCTGGAGGTTACTGTGACAAGAGTGGAAGGCGACGGCCCA
GTCGAGGAAGCAGCGTATGTGGATAGCGACAAGCTTATGCTGGCAATCAA
AGAGGTCAATGCTGCGTTGGAGGAGAGGGAAGAAGAGCTTTTCGTGCTTG
GACGGCACGAGCTCGTCGTGGCAACGCCTGGAGCAAAAGATATTCTTACA
ACGGACAGGCAATTCAAGGCCTACAAGGGATTCGAAATCATCGTGAAAGC
AGAGGTCAATGCTGCGTTGGAGGAGAGGGAAGAAGAGCTTTTCGTGCTTG
GACGGCACGAGCTCGTCGTGGCAACGCCTGGAGCAAAAGATATTCTTACA
ACGGACAGGCAATTCAAGGCCTACAAGGGATTCGAAATCATCGTGAAAGC
GGGAGGACCATTCAAGAGGAAGCGACAGCTTAAAGGAAAACTGCTTGAGC
GTACGTTCGACGAGCTGATGATAATGAAGGATGGGCGAAAAGTACGCATT
CCCTTGGCGCTTGTAGACGAAGTTCGCCTGCCGCGAGCGCTTGTGGAAGC
CGGAGACAACTTCTAGGGGAGGACCATTCAAGAGGAAGCGACAGCTTAAA
GGAAAACTGCTTGAGCGTACGTTCGACGAGCTGATGATAATGAAGGATGG
GCGAAAAGTACGCATTCCCTTGGCGCTTGTAGACGAAGTTCGCCTGCCGC
GAGCGCTTGTGGAAGCCGGAGACAACTTCTAG
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