prot_L-elsbetiae_contig9829.18777.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9829.18777.1
Unique Nameprot_L-elsbetiae_contig9829.18777.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length246
Homology
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BLAST of mRNA_L-elsbetiae_contig9829.18777.1 vs. uniprot
Match: D7G3Y9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Y9_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 3.900e-108
Identity = 198/250 (79.20%), Postives = 212/250 (84.80%), Query Frame = 0 
Query:    1 QELDATAVYHGLATKHPLVPKLARQMR----SRGRGGSTASGNDLGGRDHGNRGRASGADSRRPSGGGRRGSELSRSSADKGRRTSKGSPKWDYEEFEQGETVLGRLKWLEKGREGLLEELSEELEGLEGSTIQQLIAWSEKTDETETLISLLDEVDEQLQVMEGWLEQHGRPLEAMQVDMAEIERKNNKLDVHTKPWSHRRDLHEYLKHLVEAISISPSNESMLRNPQVVLDAALTAGEEDPTPAVEKV 246
            +ELDATAVYHGLATKHPLVPKLARQMR    SR RG   ++ N LGG   G      G   RRPSG GRRGS+LSRSS +K RR+SKG PKWDYEEFEQGE VLGRLKWLEKGREGLLEELS+ELEGLEGSTI QLIAWSEKT ETETLIS+LDEVD+QLQVMEGWLEQHG+PLEAMQVDMAEIERKNNKLDV    W + ++LHEYLKHLVEAISISPSNESMLRNPQVVLDAAL   +EDPTPAVEKV
Sbjct:  339 KELDATAVYHGLATKHPLVPKLARQMRADERSRNRGDGGSAANVLGGGLDG----GGGGHGRRPSGTGRRGSDLSRSSVEKARRSSKG-PKWDYEEFEQGEAVLGRLKWLEKGREGLLEELSDELEGLEGSTIHQLIAWSEKTAETETLISMLDEVDQQLQVMEGWLEQHGKPLEAMQVDMAEIERKNNKLDVQ---WRNYQNLHEYLKHLVEAISISPSNESMLRNPQVVLDAALNPSDEDPTPAVEKV 580
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BLAST of mRNA_L-elsbetiae_contig9829.18777.1 vs. uniprot
Match: A0A835YUC5_9STRA (Exocyst complex component Sec3-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUC5_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.370e-22
Identity = 66/135 (48.89%), Postives = 86/135 (63.70%), Query Frame = 0 
Query:   89 DYEEFEQGETVLGRLKWLEKGREGLLEELSEELEGLEGSTIQQLIAWSEKTDETETLISLLDEVDEQLQVMEGWLEQHGRPLEAMQVDMAEIERKNNKLDVHTKPWSHRRDLHEYLKHLVEAISISPSNESMLRN 223
            + EE E+GE +L RL W EKG+EGL   L EELE LEGSTI QLI WSE  D  +TL+S+LD++D+QL VM              Q DMA IER+NN LDV    W + R L ++L  LV+AI++    E++LR+
Sbjct:  330 ELEELERGEELLQRLGWKEKGQEGLEVALDEELENLEGSTIPQLIRWSETEDSAQTLVSILDDIDDQLAVM--------------QRDMAPIERQNNALDVQ---WRNYRALQDHLSVLVDAITLPFEEEAVLRD 447
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9829.18777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G3Y9_ECTSI3.900e-10879.20Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUC5_9STRA1.370e-2248.89Exocyst complex component Sec3-domain-containing p... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..190
NoneNo IPR availablePANTHERPTHR16092SEC3/SYNTAXIN-RELATEDcoord: 81..229
IPR019160Exocyst complex component Sec3, C-terminalPFAMPF09763Sec3_Ccoord: 111..225
e-value: 5.6E-11
score: 41.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9829contigL-elsbetiae_contig9829:86..7350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9829.18777.1mRNA_L-elsbetiae_contig9829.18777.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9829 86..7350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9829.18777.1 ID=prot_L-elsbetiae_contig9829.18777.1|Name=mRNA_L-elsbetiae_contig9829.18777.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=246bp
QELDATAVYHGLATKHPLVPKLARQMRSRGRGGSTASGNDLGGRDHGNRG
RASGADSRRPSGGGRRGSELSRSSADKGRRTSKGSPKWDYEEFEQGETVL
GRLKWLEKGREGLLEELSEELEGLEGSTIQQLIAWSEKTDETETLISLLD
EVDEQLQVMEGWLEQHGRPLEAMQVDMAEIERKNNKLDVHTKPWSHRRDL
HEYLKHLVEAISISPSNESMLRNPQVVLDAALTAGEEDPTPAVEKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019160Sec3_C