mRNA_L-elsbetiae_contig9828.18776.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9828.18776.1 vs. uniprot
Match: D8LRQ0_ECTSI (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ0_ECTSI) HSP 1 Score: 253 bits (646), Expect = 3.340e-83 Identity = 124/126 (98.41%), Postives = 126/126 (100.00%), Query Frame = 1 Query: 1 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 378 SGSMEPAFQRGDILFL+NGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDG+ISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA Sbjct: 58 SGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 183
BLAST of mRNA_L-elsbetiae_contig9828.18776.1 vs. uniprot
Match: A0A835Z4U9_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A835Z4U9_9STRA) HSP 1 Score: 228 bits (582), Expect = 1.750e-73 Identity = 106/126 (84.13%), Postives = 118/126 (93.65%), Query Frame = 1 Query: 1 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 378 SGSMEPAFQRGDILFLNN D+P+R GEVVVFKIKDR+IPIVHR+M VHEKPDGT+ VLTKGD+N+V+DRGLY PGQ+WL REDILGRARG LRYVGMVTI+LNDYP LKYVLVG+MGLFVLTN+EA Sbjct: 57 SGSMEPAFQRGDILFLNNQDDPIRVGEVVVFKIKDRDIPIVHRIMKVHEKPDGTVEVLTKGDNNRVDDRGLYAPGQLWLQREDILGRARGALRYVGMVTIVLNDYPALKYVLVGIMGLFVLTNKEA 182
BLAST of mRNA_L-elsbetiae_contig9828.18776.1 vs. uniprot
Match: A0A7S0SWE0_9STRA (Signal peptidase I n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWE0_9STRA) HSP 1 Score: 221 bits (563), Expect = 1.350e-70 Identity = 104/126 (82.54%), Postives = 116/126 (92.06%), Query Frame = 1 Query: 1 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 378 SGSMEPAFQRGDILFLNN D+P+R GE+VVFKIKDR+IPIVHRVM VHEK DG I VLTKGD+N+V+DRGLY PGQ WL REDILGRARGTLRY+GMVTIILNDYP LKYVL+G+MGLFVLTN+E+ Sbjct: 57 SGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVMKVHEKADGKIEVLTKGDNNRVDDRGLYAPGQQWLQREDILGRARGTLRYLGMVTIILNDYPILKYVLIGVMGLFVLTNKES 182
BLAST of mRNA_L-elsbetiae_contig9828.18776.1 vs. uniprot
Match: A0A7S3M735_9STRA (Signal peptidase I n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M735_9STRA) HSP 1 Score: 220 bits (561), Expect = 2.730e-70 Identity = 101/126 (80.16%), Postives = 118/126 (93.65%), Query Frame = 1 Query: 1 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 378 SGSMEPAFQRGDILFL N D+P+RAGE+VVFKIKDR+IPIVHRVM VHEK DG++ VLTKGD+N+V+DRGLY PGQ+WL REDILGRA+GTLRY+GMVTIILNDYP LKYVL+G+MG+FVLTN+E+ Sbjct: 57 SGSMEPAFQRGDILFLTNQDDPIRAGEIVVFKIKDRDIPIVHRVMKVHEKEDGSVEVLTKGDNNRVDDRGLYAPGQLWLQREDILGRAKGTLRYLGMVTIILNDYPVLKYVLIGIMGIFVLTNKES 182
BLAST of mRNA_L-elsbetiae_contig9828.18776.1 vs. uniprot
Match: A0A6V1QND9_HETAK (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QND9_HETAK) HSP 1 Score: 219 bits (557), Expect = 1.140e-69 Identity = 104/126 (82.54%), Postives = 115/126 (91.27%), Query Frame = 1 Query: 1 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 378 SGSMEPAFQRGDILFL N +P+RAGEVVVFKIKDREIPIVHRVM VHEK DG + LTKGD+N+V+DRGLY PGQ+WL REDILGRARGTLRYVGMVTIILNDYP LKYVLVG+MGLFVLT++E+ Sbjct: 58 SGSMEPAFQRGDILFLTNHQDPIRAGEVVVFKIKDREIPIVHRVMKVHEKGDGAVEALTKGDNNRVDDRGLYAPGQLWLGREDILGRARGTLRYVGMVTIILNDYPVLKYVLVGIMGLFVLTSKES 183
BLAST of mRNA_L-elsbetiae_contig9828.18776.1 vs. uniprot
Match: W7TFR1_9STRA (Signal peptidase I n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFR1_9STRA) HSP 1 Score: 217 bits (552), Expect = 6.570e-69 Identity = 100/126 (79.37%), Postives = 116/126 (92.06%), Query Frame = 1 Query: 1 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 378 SGSMEPAFQRGDILFLNN D+P+R GE+VVFKIKDR+IPIVHRV+ VH+K DG + +LTKGD+N+V DRGLY PGQ+WL+REDILGRA GTLRY+GMVTIILNDYP LKYVLVG+MGLFVLTN+E+ Sbjct: 58 SGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKES 183
BLAST of mRNA_L-elsbetiae_contig9828.18776.1 vs. uniprot
Match: A0A7S1U989_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7S1U989_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.880e-68 Identity = 100/126 (79.37%), Postives = 116/126 (92.06%), Query Frame = 1 Query: 1 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 378 SGSMEPAFQRGDILFL+N D P+R GE+VVFKIKDR+IPIVHRV VHEKPDG + +LTKGD+N+V+DRGLY PGQ+WL+REDILGRA GTLRYVGMVTIILND+P LKY+LVG+MGLFVLTN+E+ Sbjct: 58 SGSMEPAFQRGDILFLSNHDSPIRVGEIVVFKIKDRDIPIVHRVTKVHEKPDGKVELLTKGDNNRVDDRGLYAPGQLWLNREDILGRAVGTLRYVGMVTIILNDFPALKYLLVGIMGLFVLTNKES 183
BLAST of mRNA_L-elsbetiae_contig9828.18776.1 vs. uniprot
Match: A0A7S2RVP6_9STRA (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVP6_9STRA) HSP 1 Score: 210 bits (534), Expect = 3.340e-66 Identity = 100/125 (80.00%), Postives = 113/125 (90.40%), Query Frame = 1 Query: 1 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNRE 375 SGSMEPAFQRGDILFLNN D+P+R GEVVVFKIKDR+IPIVHRV+ VHEKPDG + +LTKGD+N+V+DRGLY GQ ++ REDILGRA GTLRYVGMVTIILNDYP LKYVLV +MGLFVLTN+E Sbjct: 57 SGSMEPAFQRGDILFLNNQDDPIRVGEVVVFKIKDRDIPIVHRVLKVHEKPDGRVELLTKGDNNRVDDRGLYALGQQFIGREDILGRAVGTLRYVGMVTIILNDYPALKYVLVAVMGLFVLTNKE 181
BLAST of mRNA_L-elsbetiae_contig9828.18776.1 vs. uniprot
Match: F0YAE9_AURAN (Signal peptidase I n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0YAE9_AURAN) HSP 1 Score: 209 bits (531), Expect = 1.450e-65 Identity = 102/136 (75.00%), Postives = 114/136 (83.82%), Query Frame = 1 Query: 1 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRAR-----------GTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNRE 375 SGSMEPAFQRGDILFLNN D P+R GEVVVFKIKDR+IPIVHRVM VHEK DG + +LTKGD+N+V+DRGLY PGQ+WL+RED+LGRA GTLRYVGMVTIILNDYP LKYVLV +MGLFVLTN+E Sbjct: 57 SGSMEPAFQRGDILFLNNQDNPIRVGEVVVFKIKDRDIPIVHRVMKVHEKADGAVELLTKGDNNRVDDRGLYAPGQLWLAREDVLGRAIRGGNKMIQGAIGTLRYVGMVTIILNDYPALKYVLVSIMGLFVLTNKE 192
BLAST of mRNA_L-elsbetiae_contig9828.18776.1 vs. uniprot
Match: A0A835Z7U7_9STRA (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7U7_9STRA) HSP 1 Score: 204 bits (518), Expect = 9.270e-64 Identity = 92/126 (73.02%), Postives = 112/126 (88.89%), Query Frame = 1 Query: 1 SGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 378 SGSMEPAFQRGDILFL+N D PLR GEVVV+K+ +++IPIVHR+M VHEKPDG++ VLTKGD+N+ +D G+Y PGQ WL REDILGRARG LRYVGMVTI LNDYP LKYVL+G+MG+FVLT++++ Sbjct: 57 SGSMEPAFQRGDILFLSNHDAPLRVGEVVVYKVANKDIPIVHRIMKVHEKPDGSVEVLTKGDANRYDDTGIYAPGQKWLKREDILGRARGALRYVGMVTIYLNDYPKLKYVLLGIMGIFVLTSKDS 182 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9828.18776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9828.18776.1 >prot_L-elsbetiae_contig9828.18776.1 ID=prot_L-elsbetiae_contig9828.18776.1|Name=mRNA_L-elsbetiae_contig9828.18776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp MEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGback to top mRNA from alignment at L-elsbetiae_contig9828:3799..6905- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9828.18776.1 ID=mRNA_L-elsbetiae_contig9828.18776.1|Name=mRNA_L-elsbetiae_contig9828.18776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3107bp|location=Sequence derived from alignment at L-elsbetiae_contig9828:3799..6905- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9828:3799..6905- >mRNA_L-elsbetiae_contig9828.18776.1 ID=mRNA_L-elsbetiae_contig9828.18776.1|Name=mRNA_L-elsbetiae_contig9828.18776.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=744bp|location=Sequence derived from alignment at L-elsbetiae_contig9828:3799..6905- (Laminarionema elsbetiae ELsaHSoW15)back to top |