mRNA_L-elsbetiae_contig9823.18772.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9823.18772.1 vs. uniprot
Match: A0A6H5KBX5_9PHAE (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBX5_9PHAE) HSP 1 Score: 454 bits (1169), Expect = 1.230e-151 Identity = 243/421 (57.72%), Postives = 291/421 (69.12%), Query Frame = 1 Query: 1 MADIPGSKRAAGEEHTASGTPGXXXXXXXXXXPNKRPRTNEEALSPEAENEDQTPSGALPA------WRGPRTIVTFNVNGGIPRMTKDWHEIDAFVTKEEPDLILFQEIRLPAKGPPKCKTTDDTGRKRGQMKDETKKDRDDIALVDRTLRALARELGYRVVMSLANSKKAGSAALIKFGKWLSTGILSLPLFSFRNRNDCPAEDLYFSFDGNKEGGLSKDHHPEGRVIVVKYPSVTVAALYVPNNGTKEEFFERRRKWDATLRQFVMEFTGGPLIVCGDLNVAYEDSDLTHPSYFKSMFPAGSPQNSGQPGCTPAERERHSDLLESGEGLVDAYRHLHP---AASGGTGTDTPGMTWRGTAGNQFAEAGRYYGKGMRIDYFLVSKELVPRVKEVKVFGSGAERKGFLGSDHCPLMLTLL 1236 M+++PGSKRAAG + ++GTP P KRPRT A GPRTIVTFN+NG PR+ K+W+EI F+ + +PDL+ FQE+RLPAKG PK K DDTGRKR Q+KD+T DR D+ALVDRTLRALAR LGYR+VMSLANSK AG+AAL+ RN CPA D+++ F E H EGRVI ++YPSVTV ALYVPNNG+K E F+RRR+WD L FV +++G L++ GDLNVA++D+DLTH S+FK MFPA +P++SGQPGCTPAE+ RHS LLESG GLVDAYR L+P A +G GT+T GMTWRGTAGNQ A GRYYGKGMRIDYFL+S L PR+KEVKVFGSGA+R GFLGSDHCPLMLTLL Sbjct: 1 MSELPGSKRAAGGDEDSAGTP---EGGGAGSVPTKRPRTIAAYAGXXXXXXXXXXXXXXXASPEDLQGAGPRTIVTFNLNGASPRLAKNWNEIKGFLEEHKPDLVCFQEVRLPAKGVPKAKKEDDTGRKRWQLKDDTAADRKDVALVDRTLRALARRLGYRLVMSLANSKYAGTAALV--------------------RNTCPATDIFYGFTSGAE------HDREGRVIAIEYPSVTVLALYVPNNGSKAESFQRRRRWDDELCGFVDKYSG-KLVITGDLNVAHQDADLTHASFFKGMFPAANPEDSGQPGCTPAEKRRHSRLLESGGGLVDAYRRLNPVPAAGAGDAGTETEGMTWRGTAGNQVAAMGRYYGKGMRIDYFLLSTVLAPRIKEVKVFGSGADRDGFLGSDHCPLMLTLL 391
BLAST of mRNA_L-elsbetiae_contig9823.18772.1 vs. uniprot
Match: A0A812K9S6_9DINO (DNA-(apurinic or apyrimidinic site) endonuclease n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A812K9S6_9DINO) HSP 1 Score: 223 bits (569), Expect = 2.080e-62 Identity = 142/361 (39.34%), Postives = 202/361 (55.96%), Query Frame = 1 Query: 163 PSGALPAWRGPRTIVTFNVNGGIPRMTKDWHEIDAFVTKEEPDLILFQEIRLPAKGPPKCKTTDDTGRKRGQMKDETKKDRDDIALVDRTLRALARELGYRVVMSLANSKKAGSAALIKFGKWLSTGILSLPLFSFRNRNDCPAEDLYFSFDGNKEGGLSKDHHPEGRVIVVKYPSVTVAALYVPNNGTKEEFFERRRKWDATLRQFVMEFTGGPLIVCGDLNVAYEDSDLTHPSYFKSMFPAGSPQNS-GQPGCTPAERERHSDLLESGEGLVDAYRHLHPAASGGTGTDTPGMTWRGTAGNQFAEAGRYYGKGMRIDYFLVSKELVPRVKEVKVFGSGAERKGFLGSDHCPLMLTLLEQ 1242 P+ + A P+ I+++NVNG ++ +W I F+ EEPD++ QE+RLPA GP CK D R RG+ K ++ +++ D LV RTL A + Y SLA+ K +G+ +I+ + L ++ +F D PA FD ++ HPEGR+I + + + A Y PNNG+ E F RR WD L + V++ PL+ GDLNVA E D+THP +F G P + GQPG T ER R +LL +G+ LVDAYR LHP+ + P TWRG A +Y+GKGMRIDY LV++E++ R++ + G GA+R GFLGSDHCPL TL ++ Sbjct: 37 PASGVEASGDPQKIISWNVNGLAVQLRNNWSLIKQFLENEEPDVLCLQEVRLPAAGPKGCKRGDGQKRSRGEAKYDSAQEKADWDLVQRTLVATYAKT-YSFHWSLADWKYSGTLMMIR--RSLRPSCITYTCSTFGV--DHPAH-----FDP-----ANRKWHPEGRIICASFATFDLLATYSPNNGSDPESFARRAAWDKALNEAVVQ-RNRPLLWIGDLNVAAERIDVTHPDWFAQQCYQGEPADMRGQPGFTEGERRRFKELLVTGK-LVDAYRRLHPSDDVPSAAG-PYFTWRGHPPVHQTVA-KYHGKGMRIDYALVAEEMLTRLEACDILGQGADRNGFLGSDHCPLRCTLQKE 378
BLAST of mRNA_L-elsbetiae_contig9823.18772.1 vs. uniprot
Match: A0A0B0MA26_GOSAR (DNA-(apurinic or apyrimidinic site) endonuclease n=24 Tax=Malvoideae TaxID=214907 RepID=A0A0B0MA26_GOSAR) HSP 1 Score: 219 bits (559), Expect = 1.260e-61 Identity = 147/375 (39.20%), Postives = 208/375 (55.47%), Query Frame = 1 Query: 142 AENEDQTPSGALPAWRGPRTIVTFNVNGGIPRMTKDWHEIDAFVTKEEPDLILFQEIRLPA---KGPPKCKTTDDTGRKRGQMKDETKKDRDDIALVDRTLRALARELGYRVVMSLANSKKAGSAALIKFGKWLSTGILSLPLFSFRNRNDCPAEDLYFSFDGNKEGGLSKDHHPEGRVIVVKYPSVTVAALYVPNNGTKEE--FFERRRKWDATLRQFVMEFTGGPLIVCGDLNVAYEDSDLTHPSYFKSMFPAG----SPQNSGQPGCTPAERERHSDLLESGEGLVDAYRHLHPAASGGTGTDTPGMTWRGTAGNQFAEAGRYYGKGMRIDYFLVSKELVPRVKEVKVFGSGAERKGFLGSDHCPLMLTLLE 1239 AEN D P + + P +T+N N + R+ +WHE FV+ +PD+I QE+R+PA KG PK K G++KD+T R++ ++ R L + Y V SLA++K AG+A L+K K L PL + FS DG +SK H P+GRVI+ ++ ++ + Y PNNG KEE F+RRRKWD L +FV++ + PLI CGDLNV++ED D++HP +F + G + ++ GQPG T AER+R +L+ G LVDAYR+LH G +W G G+Y GK MRIDYF+VS++L R+ E ++ G G E +GF GSDHCP+ L L E Sbjct: 26 AENGDALPE--VDVKKEPLKFLTWNANSLLLRVKSNWHEFSNFVSNLDPDVIAIQEVRMPAAGSKGAPK---------KPGELKDDTSSSREEKQILMRALSSPPFG-NYHVWWSLADTKYAGTALLVK--KCLR------PL------------KVSFSLDGT----VSK-HEPDGRVILAEFETLRILNTYAPNNGWKEEENSFQRRRKWDKRLLEFVVQSSDKPLIWCGDLNVSHEDIDVSHPEFFSAAKMNGYVPPNKEDCGQPGFTLAERKRFGAILKEGR-LVDAYRYLHKEKD-----MECGFSWSGHP------IGKYRGKRMRIDYFIVSEKLKERIAECEMHGKGIELEGFYGSDHCPVSLQLSE 351
BLAST of mRNA_L-elsbetiae_contig9823.18772.1 vs. uniprot
Match: A0A1Y1I964_KLENI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I964_KLENI) HSP 1 Score: 221 bits (562), Expect = 4.570e-61 Identity = 145/367 (39.51%), Postives = 197/367 (53.68%), Query Frame = 1 Query: 166 SGALPAWRGPRTIVTFNVNGGIPRMTKDWHEIDAFVTKEEPDLILFQEIRLPAKGPPKCKTTDDTGRKRGQMKDETKKDRDDIALVDRTLRALARELGYRVVMSLANSKKAGSAALIKFGKWLSTGILSLPLFSFRNRNDCPAEDLYFSFDGNKE---GGLSKDHHPEGRVIVVKYPSVTVAALYVPNNGTKEEFFERRRKWDATLRQFVMEFTGG-PLIVCGDLNVAYEDSDLTHPSYFKSMFPAG-SPQNS---GQPGCTPAERERHSDLLESGEGLVDAYRHLHPAASGGTGTDTPGMTWRGTAGNQFAEAGRYYGKGMRIDYFLVSKELVPRVKEVKVFGSGAERKGFLGSDHCPLMLTLLEQ 1242 SG + P + +++N N I RM + E+ FV + +PD+I QE+RLPA G K + RG M D T RD+ + R L A A YRV SLA+ K +G+A L+K I+ + C + L G E G H EGR+I+V++P + Y NNG KEE F+RRR WD L + V GG PLI CGD NV++ D D++HP +F+ G +P GQPG T AE++R S++LE G LVD+YRHLHP TG TW G G+Y GK MRIDYFL+S+ LV R++ ++ G+G ER+GF+GSDHCP+ L L E+ Sbjct: 102 SGYERTGKSPTSFMSWNTNSFIIRMKANKQEVVRFVEQHDPDVIAIQEVRLPAAGEKKGP------KNRGDMSDVTNSARDEKQFMTRAL-AAAPFSNYRVFWSLADGKYSGTALLVK----KEMEIVGVAY--------CFDDILTRMVAGEGEPASGRKGPKHEEEGRLIMVEFPEFRLLNTYGMNNGWKEETFQRRRDWDRRLLELVQALVGGKPLIWCGDTNVSHTDLDVSHPEFFRWQKEKGYTPPRDVDVGQPGFTQAEKDRFSEILEKGR-LVDSYRHLHPKKDYETG-----FTWSGHP------VGKYRGKRMRIDYFLLSESLVDRLESSEIHGTGIEREGFMGSDHCPITLRLREK 437
BLAST of mRNA_L-elsbetiae_contig9823.18772.1 vs. uniprot
Match: A0A6J0JHD1_RAPSA (DNA-(apurinic or apyrimidinic site) endonuclease n=3 Tax=Brassiceae TaxID=981071 RepID=A0A6J0JHD1_RAPSA) HSP 1 Score: 218 bits (555), Expect = 5.610e-61 Identity = 145/377 (38.46%), Postives = 206/377 (54.64%), Query Frame = 1 Query: 130 LSPEAENEDQTPSGALPAWRGPRTIVTFNVNGGIPRMTKDWHEIDAFVTKEEPDLILFQEIRLPA---KGPPKCKTTDDTGRKRGQMKDETKKDRDDIALVDRTLRALARELGYRVVMSLANSKKAGSAALIKFGKWLSTGILSLPLFSFRNRNDCPAEDLYFSFDGNKEGGLSKDHHPEGRVIVVKYPSVTVAALYVPNNGTKEE--FFERRRKWDATLRQFVMEFTGGPLIVCGDLNVAYEDSDLTHPSYFKSMFPAG----SPQNSGQPGCTPAERERHSDLLESGEGLVDAYRHLHPAASGGTGTDTPGMTWRGTAGNQFAEAGRYYGKGMRIDYFLVSKELVPRVKEVKVFGSGAERKGFLGSDHCPLMLTL 1233 LSPE N + G + P VT+N N + R+ DW ++ FV+ +PD+I QE+R+PA KG PK ++ D+TK RD+ ++ R L + E YRV SLA SK AG+A L+K K + PL +YF+ D L+ H P+GRVI+ ++ + + Y PNNG KEE F+RRRKWD + QF+ + + PLI CGDLNV++E+ D++HP +F + G + ++ GQPG TP+ER R +++ G LVDAYR+LH T++ G +W G G+Y GK MRIDYFLVS++L R+ K+ G G E +GF GSDHCP+ L L Sbjct: 22 LSPEKRNGEAVEEGKK--QKEPTKFVTWNANSFLLRVKNDWSDLSKFVSGFDPDVIAIQEVRMPAAGGKGKPK---------NYAELSDDTKPLRDEKQILMRALSSPPFE-NYRVWWSLAESKYAGTALLVK--KCFN------PL------------KVYFNLDK-----LASKHEPDGRVILAEFETFRLLNTYSPNNGWKEEENSFQRRRKWDKRILQFLSQTSDKPLIWCGDLNVSHEEVDVSHPDFFATAKLNGYVPPNKEDCGQPGFTPSERARFGTIMKEGR-LVDAYRYLHKEPD----TES-GFSWSGNP------IGKYRGKRMRIDYFLVSEQLKDRIVSCKMHGRGIELEGFYGSDHCPVSLEL 349
BLAST of mRNA_L-elsbetiae_contig9823.18772.1 vs. uniprot
Match: A0A2I0KDN9_PUNGR (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Punica granatum TaxID=22663 RepID=A0A2I0KDN9_PUNGR) HSP 1 Score: 216 bits (550), Expect = 2.350e-60 Identity = 137/358 (38.27%), Postives = 195/358 (54.47%), Query Frame = 1 Query: 187 RGPRTIVTFNVNGGIPRMTKDWHEIDAFVTKEEPDLILFQEIRLPA---KGPPKCKTTDDTGRKRGQMKDETKKDRDDIALVDRTLRALARELGYRVVMSLANSKKAGSAALIKFGKWLSTGILSLPLFSFRNRNDCPAEDLYFSFDGNKEGGLSKDHHPEGRVIVVKYPSVTVAALYVPNNGTKEE--FFERRRKWDATLRQFVMEFTGGPLIVCGDLNVAYEDSDLTHPSYFKSMFPAG----SPQNSGQPGCTPAERERHSDLLESGEGLVDAYRHLHPAASGGTGTDTPGMTWRGTAGNQFAEAGRYYGKGMRIDYFLVSKELVPRVKEVKVFGSGAERKGFLGSDHCPLMLTL 1233 R P VT+N N + R +W E FV+ +PD+I QE+R+PA KG PK G++KD+T R++ ++ R L +L YRV SL +SK AG+A L+K C + + FS DG + H P+GRVI+ ++ + + Y PNNG KEE F+RRRKWD L +FV++ + PLI CGDLNV++E+ D++HP +F + G + ++ GQPG T AER+R +L+ G+ LVDAYR+LH G +W G G+Y GK MRIDYF+VS++LV R+ ++ G G E +GF GSDHCP+ L L Sbjct: 40 REPLKFVTWNANSFLLRAKNNWPEFTKFVSDLDPDVIAIQEVRMPAAGSKGAPKNP---------GELKDDTSSSREEKQILMRALSSLPFG-NYRVWWSLGDSKYAGTALLVK--------------------KCCLPQRVSFSLDGK-----ASKHEPDGRVILAEFETFRLLNTYSPNNGWKEEENSFQRRRKWDKRLLEFVVQSSDKPLIWCGDLNVSHEEIDVSHPEFFAAAKLNGYVPPNKEDCGQPGFTLAERKRFGTILKEGK-LVDAYRYLHKDKD-----MDHGFSWSGNP------VGKYRGKRMRIDYFIVSEKLVSRIISCEMHGKGIELEGFYGSDHCPVSLEL 350
BLAST of mRNA_L-elsbetiae_contig9823.18772.1 vs. uniprot
Match: A0A059CYF5_EUCGR (DNA-(apurinic or apyrimidinic site) endonuclease n=7 Tax=Myrtoideae TaxID=1699513 RepID=A0A059CYF5_EUCGR) HSP 1 Score: 215 bits (547), Expect = 5.980e-60 Identity = 139/373 (37.27%), Postives = 198/373 (53.08%), Query Frame = 1 Query: 151 EDQTPSGALPAWRGPRTIVTFNVNGGIPRMTKDWHEIDAFVTKEEPDLILFQEIRLPA---KGPPKCKTTDDTGRKRGQMKDETKKDRDDIALVDRTLRALARELG-YRVVMSLANSKKAGSAALIKFGKWLSTGILSLPLFSFRNRNDCPAEDLYFSFDGNKEGGLSKDHHPEGRVIVVKYPSVTVAALYVPNNGTKEE--FFERRRKWDATLRQFVMEFTGGPLIVCGDLNVAYEDSDLTHPSYFKSMFPAG----SPQNSGQPGCTPAERERHSDLLESGEGLVDAYRHLHPAASGGTGTDTPGMTWRGTAGNQFAEAGRYYGKGMRIDYFLVSKELVPRVKEVKVFGSGAERKGFLGSDHCPLMLTLLE 1239 +D +G R P +T+N N + R+ +W E FV+ +PD+I QE+R+PA KG PK G++KD+T R++ ++ R L + G YRV SL SK AG+A L+K C + FS DG + H P+GRVI+ ++ + + Y PNNG KEE F+RRRKWD L +FV++ PLI CGDLNV++E+ D+THP +F + G +P++ GQPG T AER+R +L+ G+ L+DAYR+LH G +W G G+Y GK MRIDYF+VS++ R+K ++ G G E +GF GSDHCP+ L L E Sbjct: 24 DDGETAGEEKKKREPLKFLTWNANSFLLRVKNNWPEFTKFVSDLDPDVIAIQEVRMPAAGSKGAPKNP---------GELKDDTSSSREEKQILMRALSSPP--FGDYRVWWSLGESKYAGTALLVK---------------------KCFKPKVSFSLDGK-----ASKHEPDGRVILAEFETFRLLNTYSPNNGWKEEENSFQRRRKWDKKLLEFVVKSLDKPLIWCGDLNVSHEEIDVTHPEFFSAAKQNGYVPPNPEDCGQPGFTLAERKRFGAILKEGK-LIDAYRYLHKDKD-----MECGFSWSGNP------IGKYRGKRMRIDYFIVSEKFKDRIKSCEMHGRGIELEGFYGSDHCPVSLELSE 347
BLAST of mRNA_L-elsbetiae_contig9823.18772.1 vs. uniprot
Match: A0A0K9QF99_SPIOL (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9QF99_SPIOL) HSP 1 Score: 215 bits (547), Expect = 7.910e-60 Identity = 140/376 (37.23%), Postives = 203/376 (53.99%), Query Frame = 1 Query: 127 ALSPEAENE-DQTPSGALPAWRGPRTIVTFNVNGGIPRMTKDWHEIDAFVTKEEPDLILFQEIRLPAKGPPKCKTTDDTGRKRGQMKDETKKDRDDIALVDRTLRALARELGYRVVMSLANSKKAGSAALIKFGKWLSTGILSLPLFSFRNRNDCPAEDLYFSFDGNKEGGLSKDHHPEGRVIVVKYPSVTVAALYVPNNGTKEE--FFERRRKWDATLRQFVMEFTGGPLIVCGDLNVAYEDSDLTHPSYFKSMFPAG----SPQNSGQPGCTPAERERHSDLLESGEGLVDAYRHLHPAASGGTGTDTPGMTWRGTAGNQFAEAGRYYGKGMRIDYFLVSKELVPRVKEVKVFGSGAERKGFLGSDHCPLMLTL 1233 ALS +AENE D+ SG + P +T+N N + R +W E V +PD+I QE+R+PA G + + +G++KD+T RD+ ++ R L + A YRV SL++SK AG+A L+K F+ + + FS D +K H P+GR+I+ ++ S+ YVPNNG KEE F RRRKWD + + +++ + PLI CGDLNV++ED D++HP +F + G + ++ GQPG T +ER+R +L G+ L+DAYR LH G +W G G+Y GK MRIDYFLVS++L R+ K+ G G E +GF GSDHCP+ L L Sbjct: 18 ALSTQAENEEDERESGDDGHGKEPSKFLTWNANSLLLRAKNNWPEFSKLVATLDPDIIAIQEVRMPAAG------SKGASKNQGELKDDTNASRDEKKVLMRALSS-APFGNYRVWWSLSDSKYAGTALLVKK--------------CFKPKK------ISFSLDP-----AAKKHEPDGRLILAEFESLRFINTYVPNNGWKEEESSFIRRRKWDKKMLELILQLSDKPLIWCGDLNVSHEDIDVSHPEFFATAKMNGYIPPNKEDCGQPGFTMSERKRFGTMLREGK-LIDAYRFLHKEKD-----MECGFSWSGNP------VGKYRGKRMRIDYFLVSEKLKDRIVSCKMHGHGIELEGFCGSDHCPVSLEL 349
BLAST of mRNA_L-elsbetiae_contig9823.18772.1 vs. uniprot
Match: A0A812Y8A6_SYMMI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y8A6_SYMMI) HSP 1 Score: 223 bits (568), Expect = 3.570e-59 Identity = 154/421 (36.58%), Postives = 217/421 (51.54%), Query Frame = 1 Query: 103 KRPRTNEEALSPEAENEDQTPSGALPAWRGPRTIVTFNVNGGIPRMTKDWHEIDAFVTKEEPDLILFQEIRLPAKGPPKCKTTDDTGRKRGQMKDETKKDRDDIALVDRTLRALARELGYRVVMSLANSKKAGSAALIKFGKWLSTGILSLPLFSFRNRNDCPAEDLYFSFDGNKEGGLSKDHHPEGRVIVVKYPSVTVAALYVPNNGTKEEFFERRRKWDATLRQFVMEFTGGPLIVCGDLNVAYEDSDLTHPSYFKSMFPAGSPQNS-GQPGCTPAERERHSDLLESGEGLVDAYRHLHPA-----ASGGTGTDTPGMTWRGTAGNQFAEAGRYYGKGMRIDYFLVSKELVPRVKEVKVFGSGAERKGFLGSDHCPLMLTLLEQ*RDKRVCCVGVEREVAVVPRARTKND*QAFERPWP 1347 KR RTN + P+ A P+ I+++N NG ++ +W I F+ E+PD++ QE+RLPA GP CK D R RG+ K ++ +++ D LV RTL A ++ Y SLA+ K AG+ +I+ + L ++ +F D FD ++ HPEGR+I + + + A Y PNNG+ E F RR WD L + V++ PL+ GDLNVA E D+THP +F G P + GQPG T ER R +LL +G LVDAYR LHP+ A+G P TWRG A +Y+GKGMRIDY LV++E++ R++ + G GA+R GFLGSDHCPL TL ++ G +AVV + T + E P P Sbjct: 25 KRQRTN---------SAQDDPAPGAEALGDPQKIISWNANGLAVQLRNNWSLIKQFLENEDPDVLCLQEVRLPAAGPKGCKRGDGQKRSRGEAKYDSAQEKADWDLVQRTLVATFAKM-YSFHWSLADWKYAGTLMMIR--RSLRPSCITYTCSTF-------GMDHAAHFDP-----ANRKWHPEGRIICASFATFDLLATYSPNNGSDPESFARRAAWDKALNEAVVQ-RNRPLLWIGDLNVAAERIDVTHPDWFAQQCYQGEPADMRGQPGFTEGERRRFKELLVTGR-LVDAYRRLHPSDDVPPAAG------PYFTWRGHPPVHQTVA-KYHGKGMRIDYALVAEEMLARLEACDILGQGADRNGFLGSDHCPLRCTLQKE------SSAGSPPSIAVVEQPSTLSSQVDSEFPAP 406
BLAST of mRNA_L-elsbetiae_contig9823.18772.1 vs. uniprot
Match: A0A1R3KAD3_COCAP (DNA-(apurinic or apyrimidinic site) endonuclease n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3KAD3_COCAP) HSP 1 Score: 213 bits (541), Expect = 4.990e-59 Identity = 136/358 (37.99%), Postives = 198/358 (55.31%), Query Frame = 1 Query: 193 PRTIVTFNVNGGIPRMTKDWHEIDAFVTKEEPDLILFQEIRLPAKGPPKCKTTDDTGRKRGQMKDETKKDRDDIALVDRTLRALAREL--GYRVVMSLANSKKAGSAALIKFGKWLSTGILSLPLFSFRNRNDCPAEDLYFSFDGNKEGGLSKDHHPEGRVIVVKYPSVTVAALYVPNNGTKEEF--FERRRKWDATLRQFVMEFTGGPLIVCGDLNVAYEDSDLTHPSYFKSMFPAG----SPQNSGQPGCTPAERERHSDLLESGEGLVDAYRHLHPAASGGTGTDTPGMTWRGTAGNQFAEAGRYYGKGMRIDYFLVSKELVPRVKEVKVFGSGAERKGFLGSDHCPLMLTLLEQ 1242 P VT+N N + R+ +W E F++K +PD+I QE+R+PA G + T + ++KD+T R++ + LRAL+ YRV SLA+SK AG+A L+K K L P + +YFS D + H P+GRVI+ ++ +V V Y PNNG KEE F+RRR+WD L +FV++ + PLI CGDLNV++ED D++HP +F + G + ++ GQPG T +ER+R ++L+ G LVDAYR+ H G +W G G+Y GK MRIDYF+VS +L R+ ++ G G E +GF GSDHCP+ L L ++ Sbjct: 42 PLKFVTWNANSLLLRVKNNWPEFSGFISKIDPDIIAIQEVRMPAAG------SKGTAKNPAELKDDTSSSREEKQTL---LRALSSPPFGNYRVWWSLADSKYAGTALLVK--KCLR-----------------PVK-VYFSLDKT-----ASKHEPDGRVILAEFETVRVLNTYAPNNGWKEEANSFQRRRRWDKRLLEFVVQSSDKPLIWCGDLNVSHEDIDVSHPEFFSAAKMNGYVPPNKEDCGQPGFTLSERKRFGEILKEGR-LVDAYRYQHKEQD-----MERGFSWSGHP------IGKYRGKRMRIDYFIVSDKLKDRIAACEMHGHGIELEGFYGSDHCPVSLQLSDE 353 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9823.18772.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9823.18772.1 >prot_L-elsbetiae_contig9823.18772.1 ID=prot_L-elsbetiae_contig9823.18772.1|Name=mRNA_L-elsbetiae_contig9823.18772.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=415bp MADIPGSKRAAGEEHTASGTPGGGGGGGSSSSPNKRPRTNEEALSPEAENback to top mRNA from alignment at L-elsbetiae_contig9823:2..5969- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9823.18772.1 ID=mRNA_L-elsbetiae_contig9823.18772.1|Name=mRNA_L-elsbetiae_contig9823.18772.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5968bp|location=Sequence derived from alignment at L-elsbetiae_contig9823:2..5969- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9823:2..5969- >mRNA_L-elsbetiae_contig9823.18772.1 ID=mRNA_L-elsbetiae_contig9823.18772.1|Name=mRNA_L-elsbetiae_contig9823.18772.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2490bp|location=Sequence derived from alignment at L-elsbetiae_contig9823:2..5969- (Laminarionema elsbetiae ELsaHSoW15)back to top |