|
Homology
BLAST of mRNA_L-elsbetiae_contig981.18766.1 vs. uniprot
Match: A0A6H5L010_9PHAE (Atx10homo_assoc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L010_9PHAE) HSP 1 Score: 425 bits (1092), Expect = 2.990e-132 Identity = 358/770 (46.49%), Postives = 400/770 (51.95%), Query Frame = 2
Query: 386 ALQFAVDQAPFACGAAPAHPAAXXXXXXXXXXXXXXXXXXXXXXXTLASSDTSGVRLAVRAGLQFACNYCVGSEENKALLWGVWFPRRLMELTNVLKTDRGLLSLAVALIHNCCISXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGD-----RGRERLGSLVADRAFCCLLMKVVVPQTP-----VGGSGSTGXXXXXXXXXXXXXXXXXAAEWLYLLFCRIVQERLCHDLYANVGIRTGGRQRHRPQRQAVAAVAMDPNSVARVKGSGCEQGGAAVVVGTSDRVSLGGXXXXXEGTGEGGEGQRGVQXXXXXXXXXXXXXXXXXFPVTPEQLIALNLAEMAAG------DDIVTGGERSSLQQREACDALVPWLVALLAAMPLNQALLPPATTATAAADSAPSVPGRTPAXXXXX-----PASSAVRGGQDSAGGGAVNAETERVRRSMREEARSAVLRTLAALLAGCGGGTRR-------------------------------AATPRVP---------------------------------PPQRAPGACESIPPXXXSPSLTSPTAAQPETR-LVPLCLRLLRGCGGGA----AXXXXXXXXAKRGTSPAAPGRGVPXXXXXXXXXXAATPG--VPVGRAGEXXXXXXXXXXXXXXXXXRKAELLKVVGNACFRCQAAQDLVREEGGLPLVLSQCGVDDANPLLREYALLAVRNLCEGNPANQASISALQPQGSTTGMDQALADMGLEGHVNSEGNFKIGPRPS 2419
ALQFAVDQA FAC A +HPAA TS VRLAVRAGLQFA NYC GSEE+K LW WFPR LMEL N LKTDRGLLSLAVALIHNCCIS X D RGRERL L AD+AFC VG SGS AAEWLYLLFC VQERLC +Y NVGIR G R++ +R AV +D ARV SG E+ GAA G+ +S G E GEGG+G+ V XXXXXXXXXXXXXXXX PVTPEQLI LNLAE+A G D++VTGGE S +QR+AC AL WL LL+AMPL+Q+LLP TA XXXXX P+SSA G +D G A +AETERVRRSMREEARSA LR LAALLAGC TR+ AAT V P R G XXX+P+ +P PE R LVPLCLRLL GCGG A + K T+ AA G A G VP GR K ELLKV+GNACFRC+ +QDLVREEGGLPLVL+ C VD+ NPLLREYALLAVRNLCEGNPANQASI++LQPQG T GM ++LADMGLEG VN+EG F +GPRP+
Sbjct: 127 ALQFAVDQALFAC-ATTSHPAASTAECQSEV------------------GGTSDVRLAVRAGLQFAYNYCAGSEESKVSLWAAWFPRGLMELVNELKTDRGLLSLAVALIHNCCISPRPREPGEDDGSDRGSNRDNGAGEAGXEEADGGERSRGRERLALLSADKAFCXXXXXXXXXXXXXXXXXVGASGSHSRERSGGEPDDDP-----AAEWLYLLFCCFVQERLCRRVYDNVGIRAGKRRKRPRRRGGCGAVVVDS---ARVAQSGGEEDGAAGGSGSVRAIS--GVGRGEEEWGEGGKGR--VDEXXXXXXXXXXXXXXXXXPVTPEQLIVLNLAELATGKCGWNSDEVVTGGECPSPRQRQACSALASWLTGLLSAMPLSQSLLPRTGTAQPXXXXXXXXXXXXXXXXXXXXKPLSPSSSA--GDEDRGDGVAADAETERVRRSMREEARSAALRGLAALLAGCSDETRQQIAXXXXXXXXXXXXXXXXXXXXXXXXXPQQAATLGVALGEAEETTRSAAKATAAGVGGASEGEGCEATRVPRVREDGGXXXXXXXXXTPTTATPVVLHPEPRGLVPLCLRLLHGCGGAAEPNPSASSGQFSRKKGSTASAAVAAGARDTARSGSHHRGALSGGAVPAGR---------------------KVELLKVIGNACFRCRRSQDLVREEGGLPLVLNHCAVDETNPLLREYALLAVRNLCEGNPANQASIASLQPQGCTPGMVESLADMGLEGSVNAEGKFTVGPRPT 842
BLAST of mRNA_L-elsbetiae_contig981.18766.1 vs. uniprot
Match: D8LJX9_ECTSI (Atx10homo_assoc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX9_ECTSI) HSP 1 Score: 365 bits (937), Expect = 4.680e-112 Identity = 320/761 (42.05%), Postives = 358/761 (47.04%), Query Frame = 2
Query: 380 MQALQFAVDQAPFACGAAPAHPAAXXXXXXXXXXXXXXXXXXXXXXXTLASSDTSGVRLAVRAGLQFACNYCVGSEENKALLWGVWFPRRLMELTNVLKTDRGLLSLAVALIHNCCISXXXXXXXXXXXXXXXXXXXXXXXXXXXRRG-----DRGRERLGSLVADRAFCCLLMKVVVPQTPVGGSGSTGXXXXXXXXXXXXXXXXXAAEWLYLLFCRIVQERLCHDLYANVGIRTGGRQRHRPQRQAVAAVAMDPNSVARVKGSGCEQGGAAVVVGTSDRVSLGGXXXXXEGTGEGGEGQRGVQXXXXXXXXXXXXXXXXXFPVTPEQLIALNLAEMAAGDDIVTGGERSSLQQREACDALVPWLVALLAAMPLNQALLPPATTATAAADSAPSVPGRTPAXXXXXPASSAVRGGQDSAGGGAVNAETERVRRSMREEARSAVLRTLAALLAGCGGGTRRAA--------------------------------------------TPRVPPPQRAPGA--------CE-----------------SIPPXXXSPSLTSPTAAQPETR-LVPLCLRLLRGCGGGA----AXXXXXXXXAKRGTSPAAPGRGVPXXXXXXXXXXAATP--GVPVGRAGEXXXXXXXXXXXXXXXXXRKAELLKVVGNACFRCQAAQDLVREEGGLPLVLSQCGVDDANPLLREYALLAVRNLCEGNPANQASISALQPQGSTTGMDQALADMGLEGHVNSEGNFKIGPRPS 2419
MQALQFAVDQAPFAC A +HPAA D S VRLAVRAGLQFA NYC GSEE+KA LW WFPR LMEL N LKTDRGLLSLAVAL+HNCCIS XX RGRERL L AD+AFCC XXXXXXXXXXXXXXXXXAAEWLYLLFC VQERLC +Y NVGIR G R + RP+RQA D++VTGGER +QR+AC AL WL LL+A+PL+Q+LLP TA XXXXX SA G ++ G A +AETERVRRSMREEARSA LR LAALLAGC TR+ T R A G+ CE S+P +P+ +P AQPE LVPLCLRLL GCGG A A + T+ AA G P VP GR K ELLKV+GNACFRC+ +QDLVREEGGLPLVL+ C VD+ANPLLREYALLA+RNLCEGN ANQASIS+LQPQG T GM++ALADMGLEG VN+EG F +GPRP+
Sbjct: 1 MQALQFAVDQAPFAC-ATTSHPAARTAECQSEV------------------GDASDVRLAVRAGLQFAYNYCAGSEESKASLWAAWFPRGLMELVNELKTDRGLLSLAVALVHNCCISPPPREPREDDGSPRESNRDNGTGEAXXXXXXXXERSRGRERLDLLSADKAFCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEWLYLLFCCFVQERLCRRVYDNVGIRAGKRTK-RPRRQA---------------------------------------------------------------------------------------------DEVVTGGERPCPRQRQACGALAAWLTGLLSAIPLSQSLLPRTGTAQPPXXXXXXXXXXXXXXXXXXXXXSA--GHEERGDGVATDAETERVRRSMREEARSAALRALAALLAGCSDETRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGVASGEAEETTRSAAKVTAAGSGGASEGEGCEVARVPRVSEDGGGGRGGSLP---LTPTTATPVIAQPEPLGLVPLCLRLLHGCGGAAEPNPAASSGQFSRKEGSTASAAVATGAGDTAPNGSHHRGELPDGAVPAGR---------------------KVELLKVIGNACFRCRRSQDLVREEGGLPLVLNHCKVDEANPLLREYALLALRNLCEGNAANQASISSLQPQGCTPGMEEALADMGLEGSVNAEGKFAVGPRPT 622
BLAST of mRNA_L-elsbetiae_contig981.18766.1 vs. uniprot
Match: A0A3M6VRE6_9STRA (Atx10homo_assoc domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VRE6_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.360e-20 Identity = 48/99 (48.48%), Postives = 70/99 (70.71%), Query Frame = 2
Query: 2108 KAELLKVVGNACFRCQAAQDLVREEGGLPLVLSQCGVDDANPLLREYALLAVRNLCEGNPANQASISALQPQGSTTGMDQALADMGLEGHVNSEGNFKI 2404
++ L++V+GN CFR QDL+R+EG LPL L+ C +D+ NPL+RE++L+A+RNLCEGN ANQ+ I+AL+PQG D AL + H+ +G K+
Sbjct: 461 RSRLIRVIGNLCFRHTYHQDLIRDEGYLPLFLNHCNIDETNPLVREWSLVALRNLCEGNEANQSFINALRPQGMDAASDTALEKAKVRVHIEEDGKVKL 559
BLAST of mRNA_L-elsbetiae_contig981.18766.1 vs. uniprot
Match: A0A835ZAD7_9STRA (Spinocerebellar ataxia type 10 protein domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD7_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.370e-20 Identity = 45/74 (60.81%), Postives = 58/74 (78.38%), Query Frame = 2
Query: 2105 RKAELLKVVGNACFRCQAAQDLVREEGGLPLVLSQCGVDDANPLLREYALLAVRNLCEGNPANQASISALQPQG 2326
RKA+L+KV+ NAC C+AAQD VR GG+PLVLS C +D A+P LRE+ ++AVRNLCEGN NQA ++ L+ QG
Sbjct: 27 RKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQG 100
BLAST of mRNA_L-elsbetiae_contig981.18766.1 vs. uniprot
Match: A0A662XYY0_9STRA (Atx10homo_assoc domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XYY0_9STRA) HSP 1 Score: 105 bits (262), Expect = 5.760e-20 Identity = 50/99 (50.51%), Postives = 70/99 (70.71%), Query Frame = 2
Query: 2108 KAELLKVVGNACFRCQAAQDLVREEGGLPLVLSQCGVDDANPLLREYALLAVRNLCEGNPANQASISALQPQGSTTGMDQALADMGLEGHVNSEGNFKI 2404
++ L++VVGN FR A QDLVR+EG LPL L+ C +D+ NPL+RE++L+A+RNLCEGN ANQ+ ISAL+PQG + AL + V+ +G K+
Sbjct: 419 RSGLIRVVGNLSFRHSAHQDLVRDEGYLPLFLNHCNIDETNPLIREWSLVALRNLCEGNEANQSYISALRPQGMDSASSVALEKAQMHAEVDDDGKIKL 517
BLAST of mRNA_L-elsbetiae_contig981.18766.1 vs. uniprot
Match: A0A8K1CP50_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP50_PYTOL) HSP 1 Score: 102 bits (254), Expect = 7.250e-19 Identity = 48/103 (46.60%), Postives = 77/103 (74.76%), Query Frame = 2
Query: 2108 KAELLKVVGNACFRCQAAQDLVREEGGLPLVLSQCGVDDANPLLREYALLAVRNLCEGNPANQASISALQPQGSTTGMDQALADMGLEGHVNSEGNFKIGPRP 2416
++ +++VVGN C R ++ Q+LVREEG LPL L+ C +D+ NPLLRE++L+A+RNLCEGN ANQA I+AL+PQG + + L+++ +E ++ +G ++ +P
Sbjct: 459 RSAIIRVVGNMCHRQESHQNLVREEGYLPLFLNHCNIDEPNPLLREWSLVALRNLCEGNEANQAYITALRPQGLDSS-NVNLSNVNVEASLSDDGKVRVTQKP 560
BLAST of mRNA_L-elsbetiae_contig981.18766.1 vs. uniprot
Match: A0A329S699_9STRA (Atx10homo_assoc domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S699_9STRA) HSP 1 Score: 102 bits (254), Expect = 7.320e-19 Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 2
Query: 2108 KAELLKVVGNACFRCQAAQDLVREEGGLPLVLSQCGVDDANPLLREYALLAVRNLCEGNPANQASISALQPQGSTTGMDQALADMGLEGHVNSEGNFKIGPR 2413
++ L++V+GN FR QDLVREEG LPL L+ C +D+ NP++RE++L+A+RNLCEGN ANQ+ I+AL+PQG AL + + +GN K+ R
Sbjct: 464 RSGLIRVIGNLSFRDTDHQDLVREEGYLPLFLNHCNIDETNPMIREWSLVALRNLCEGNEANQSYINALRPQGMDAASTAALEKAKMRADIGGDGNVKLTKR 565
BLAST of mRNA_L-elsbetiae_contig981.18766.1 vs. uniprot
Match: A0A6A3TBV9_9STRA (Atx10homo_assoc domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TBV9_9STRA) HSP 1 Score: 102 bits (253), Expect = 9.200e-19 Identity = 48/99 (48.48%), Postives = 67/99 (67.68%), Query Frame = 2
Query: 2108 KAELLKVVGNACFRCQAAQDLVREEGGLPLVLSQCGVDDANPLLREYALLAVRNLCEGNPANQASISALQPQGSTTGMDQALADMGLEGHVNSEGNFKI 2404
++ L++VVGN FR QDLVRE G LPL L+ C +D+ NPL+RE++L+A+RNLCEGN ANQ+ I+AL+PQG T AL + + +G K+
Sbjct: 454 RSGLIRVVGNLSFRHTDHQDLVREHGYLPLFLNHCNIDETNPLIREWSLVALRNLCEGNEANQSYINALRPQGMDTASSAALEKANMRADIGEDGKVKL 552
BLAST of mRNA_L-elsbetiae_contig981.18766.1 vs. uniprot
Match: D0N6W2_PHYIT (Atx10homo_assoc domain-containing protein n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0N6W2_PHYIT) HSP 1 Score: 100 bits (248), Expect = 2.270e-18 Identity = 51/97 (52.58%), Postives = 73/97 (75.26%), Query Frame = 2
Query: 2108 KAELLKVVGNACFRCQAAQDLVREEGGLPLVLSQCGVDDANPLLREYALLAVRNLCEGNPANQASISALQPQG----STTGMDQAL--ADMGLEGHV 2380
++ L++V+GN FR QDLVR EG LPL L+ C +D+ NP++RE++L+A+RNLCEGN ANQ+ I+AL+PQG STT +D+A AD+G +G+V
Sbjct: 367 RSGLIRVIGNLSFRHTDHQDLVRNEGYLPLFLNHCNIDETNPMIREWSLVALRNLCEGNEANQSYINALRPQGMDAASTTTLDKAKMRADIGKDGNV 463
BLAST of mRNA_L-elsbetiae_contig981.18766.1 vs. uniprot
Match: A0A2D4BF77_PYTIN (Atx10homo_assoc domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BF77_PYTIN) HSP 1 Score: 98.6 bits (244), Expect = 2.940e-18 Identity = 48/100 (48.00%), Postives = 73/100 (73.00%), Query Frame = 2
Query: 2108 KAELLKVVGNACFRCQAAQDLVREEGGLPLVLSQCGVDDANPLLREYALLAVRNLCEGNPANQASISALQPQG-STTGMDQALADMGLEGHVNSEGNFKI 2404
++ +++VVGN C+R QD+VRE+G LPL L+ C VD+ NPLLRE++L+A+RNLCEGN ANQ I+AL+PQG T +D L + ++ ++++G K+
Sbjct: 283 RSAIIRVVGNLCYRQTDHQDIVREKGFLPLFLNHCNVDEMNPLLREWSLVALRNLCEGNEANQQYITALRPQGIDKTSVD--LDGLNVDAKLDADGKLKV 380
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 380.9 |
Seed ortholog evalue | 1.2e-102 |
Seed eggNOG ortholog | 2880.D8LJX9 |
Preferred name | ATXN10 |
KEGG rclass | RC00004,RC00503 |
KEGG ko | ko:K01641,ko:K18932,ko:K19323,ko:K20003 |
KEGG Reaction | R01978 |
KEGG Pathway | ko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130 |
KEGG Module | M00088,M00095 |
Hectar predicted targeting category | other localisation |
GOs | GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006996,GO:0007275,GO:0007399,GO:0008150,GO:0009987,GO:0016020,GO:0016043,GO:0019899,GO:0022008,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030425,GO:0031175,GO:0032501,GO:0032502,GO:0036477,GO:0042802,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044297,GO:0044424,GO:0044444,GO:0044463,GO:0044464,GO:0044782,GO:0048468,GO:0048471,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0051259,GO:0051260,GO:0060271,GO:0065003,GO:0070206,GO:0070207,GO:0070925,GO:0071840,GO:0071944,GO:0097447,GO:0097458,GO:0120025,GO:0120031,GO:0120036,GO:0120038 |
EggNOG free text desc. | threonine biosynthetic process |
EggNOG OGs | KOG2676@1,KOG2676@2759 |
EC | 2.3.1.225,2.3.3.10 |
COG Functional cat. | J |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002,ko01000,ko04131 |
Exons | 5 |
Model size | 2574 |
Cds size | 2067 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817042.8004234-UTR-L-elsbetiae_contig981:14607..14986 | 1622817042.8004234-UTR-L-elsbetiae_contig981:14607..14986 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig981 14608..14986 + |
1691684004.0179727-UTR-L-elsbetiae_contig981:14607..14986 | 1691684004.0179727-UTR-L-elsbetiae_contig981:14607..14986 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig981 14608..14986 + |
1622817042.865986-UTR-L-elsbetiae_contig981:18980..19108 | 1622817042.865986-UTR-L-elsbetiae_contig981:18980..19108 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig981 18981..19108 + |
1691684004.0902727-UTR-L-elsbetiae_contig981:18980..19108 | 1691684004.0902727-UTR-L-elsbetiae_contig981:18980..19108 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig981 18981..19108 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622817042.8129287-CDS-L-elsbetiae_contig981:14986..15262 | 1622817042.8129287-CDS-L-elsbetiae_contig981:14986..15262 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig981 14987..15262 + |
1691684004.031971-CDS-L-elsbetiae_contig981:14986..15262 | 1691684004.031971-CDS-L-elsbetiae_contig981:14986..15262 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig981 14987..15262 + |
1622817042.8233435-CDS-L-elsbetiae_contig981:15579..15813 | 1622817042.8233435-CDS-L-elsbetiae_contig981:15579..15813 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig981 15580..15813 + |
1691684004.0419896-CDS-L-elsbetiae_contig981:15579..15813 | 1691684004.0419896-CDS-L-elsbetiae_contig981:15579..15813 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig981 15580..15813 + |
1622817042.835396-CDS-L-elsbetiae_contig981:16443..16939 | 1622817042.835396-CDS-L-elsbetiae_contig981:16443..16939 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig981 16444..16939 + |
1691684004.0564132-CDS-L-elsbetiae_contig981:16443..16939 | 1691684004.0564132-CDS-L-elsbetiae_contig981:16443..16939 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig981 16444..16939 + |
1622817042.845681-CDS-L-elsbetiae_contig981:17279..18135 | 1622817042.845681-CDS-L-elsbetiae_contig981:17279..18135 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig981 17280..18135 + |
1691684004.0717146-CDS-L-elsbetiae_contig981:17279..18135 | 1691684004.0717146-CDS-L-elsbetiae_contig981:17279..18135 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig981 17280..18135 + |
1622817042.8556583-CDS-L-elsbetiae_contig981:18775..18980 | 1622817042.8556583-CDS-L-elsbetiae_contig981:18775..18980 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig981 18776..18980 + |
1691684004.081-CDS-L-elsbetiae_contig981:18775..18980 | 1691684004.081-CDS-L-elsbetiae_contig981:18775..18980 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig981 18776..18980 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig981.18766.1 >prot_L-elsbetiae_contig981.18766.1 ID=prot_L-elsbetiae_contig981.18766.1|Name=mRNA_L-elsbetiae_contig981.18766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=689bp
MQALQFAVDQAPFACGAAPAHPAAAAAAAAAATVVRQEGAAAAVAAATLA SSDTSGVRLAVRAGLQFACNYCVGSEENKALLWGVWFPRRLMELTNVLKT DRGLLSLAVALIHNCCISPPPPPPRERRGYGAEEEEEEQQQKQQERRGDR GRERLGSLVADRAFCCLLMKVVVPQTPVGGSGSTGTSPASPSTSGADPDP DPAAEWLYLLFCRIVQERLCHDLYANVGIRTGGRQRHRPQRQAVAAVAMD PNSVARVKGSGCEQGGAAVVVGTSDRVSLGGGGGGKEGTGEGGEGQRGVQ QNDDDDDDDDDEREDFFFPVTPEQLIALNLAEMAAGDDIVTGGERSSLQQ REACDALVPWLVALLAAMPLNQALLPPATTATAAADSAPSVPGRTPASPS HPPASSAVRGGQDSAGGGAVNAETERVRRSMREEARSAVLRTLAALLAGC GGGTRRAATPRVPPPQRAPGACESIPPPPPSPSLTSPTAAQPETRLVPLC LRLLRGCGGGAAAEPEPAPTAKRGTSPAAPGRGVPATAAAAAVAVAATPG VPVGRAGEAAGAAGAVGVSRGAPAGRKAELLKVVGNACFRCQAAQDLVRE EGGLPLVLSQCGVDDANPLLREYALLAVRNLCEGNPANQASISALQPQGS TTGMDQALADMGLEGHVNSEGNFKIGPRPSQPRAPSEL* back to topmRNA from alignment at L-elsbetiae_contig981:14608..19108+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig981.18766.1 ID=mRNA_L-elsbetiae_contig981.18766.1|Name=mRNA_L-elsbetiae_contig981.18766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4501bp|location=Sequence derived from alignment at L-elsbetiae_contig981:14608..19108+ (Laminarionema elsbetiae ELsaHSoW15) TGTTTTCGGTTTAGGTTTAGTCTCCCACAACTCACCAGCTCTTCCTAATT
CGGCCTCGGTTGCTACTCTGTACACTGATCTCAATATCGAGGCGACATCT
GTTAGGAATCAAAATTCGATGGCCGCGAAGGAGACAAGCAGGCAACCTCC
CAAAATACACAAATCATTAGTAACCCATGTTGCAGTCCACGTTTCGTGGA
GTACCGAATGAATTGGCGCCGCTCCCCCTAAAACGAACAGAGTCGTCTCT
TCAGACACACCTGGCTCACCGCGGTTGTTCGCAAATACCTGGCACCCCTC
AAAAGTATCCCAAGCGCGCCTAGGTAGCAGTGCTGCCGCCGCGGCCACCC
TCCTGACGCAAACACCAAAAACAACCACAATGCAGGCGCTCCAATTCGCT
GTCGACCAGGCCCCTTTTGCGTGTGGGGCCGCGCCCGCACACCCCGCCGC
CGCAGCCGCCGCCGCCGCCGCCGCCACGGTAGTTCGCCAGGAAGGAGCGG
CGGCGGCGGTGGCTGCGGCGACGTTAGCGAGCTCGGACACGTCAGGCGTC
AGGCTCGCTGTTCGGGCGGGTTTGCAGTTTGCTTGCAACTACTGCGTCGG
CAGCGAGGAGAACAAGGCCCTGCTGTGGGGTGTCTGGTTTCCCCGGCGCC
TGATGGTGCGTAGCCGCCGTGTATACATAGCCGGTTGCTTCGCCTTTCAA
GCGCTTGAGATCACCATCGCATCATGTCATATCGGGGAACGTTGCCTTCG
AGGAGACATCATGGTGAAAAAGTTCCTCTCTCGTGAGAGACGGACAGACG
GAGAGCGAGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAG
AGAGAGCAACCGGCAGATCACCAGCCGGTTTGTCATTGGTCCTTGTGTTT
ACCACCGCCAACGCCGGTTTATGCTTGCCGTTCTGGCCGCGGTGACACGA
ACGGTGCACCGCACACTCGCAGGAGCTGACGAACGTCCTCAAAACGGACC
GCGGACTTCTCTCGCTTGCGGTCGCGCTCATCCACAACTGCTGCATATCG
CCGCCGCCCCCGCCCCCGCGGGAGCGAAGAGGATACGGGGCAGAGGAGGA
AGAGGAGGAGCAGCAGCAGAAGCAGCAGGAGAGGCGAGGAGACAGGGGAC
GAGAAAGGCTCGGGAGCCTAGTGGCGGACAGGGCGTTTTGTTGCCTCCTC
ATGAAGGTGGCGTTGTTTTGTTGTCCTCTTTTAGCTGCCGGCGACTGCGG
CGCCTGAAGCTGCGTCTCTTGTATCTTGGTTTCCCACGCGAAAACATACC
ACGTGCGTGCACACGGCATACGGTGGTCGAGCGAGCGTTCTGTGCAGGTT
TAATTTTATCGTGTGCGTTCGTTCACAGCAGTCACATATGGTGTGTTTGC
GGTACAATACACAAAAGCGGGATACTATATGGCACACTTTCTTTGCAGGC
AGGATATATTGCAGGCATGGTACGTTTTGCAGGTTGTCCCAGATTCGAGG
TGAAACAAGCAAGGGGGTTCGCGCCGAGAAAATACCCAGTCTGTGAAACC
CCACCATGTCTACTTGATGGCTGGCTGCTCACTGGCTGGTACGCCAGGTG
TTGATTTGGTGAGTCCTTACGCGCTTGCGATTACCATGGCAAACGAGTCC
GGCCACAGCGGCCGCAGTTCCGGTGGTGCGCATAGTAGCGTGAGTCCTGG
CGCTGGGTGTCTCTCATGGGAAATCTCTCGTCTTGCGTCTTTCGGGCATC
TTTTGCGCGGCTGGTCCCTCATATTTAGTACTGAAAGCCCCCCCCCCCGC
CCCCCCCCCCCCGCCTGCTTTTGGTGTGCGTCACAGGTGGTCGTTCCTCA
AACCCCAGTCGGCGGCAGTGGCAGCACGGGAACATCTCCCGCTTCCCCAA
GCACAAGTGGCGCCGATCCTGATCCCGACCCCGCCGCAGAGTGGCTGTAT
CTACTCTTCTGCCGCATCGTCCAGGAGCGCTTGTGCCACGACCTCTACGC
CAACGTGGGCATTCGGACTGGAGGCAGGCAGCGACACCGACCCCAGCGCC
AAGCGGTAGCGGCAGTAGCCATGGACCCGAACTCAGTGGCGAGGGTGAAG
GGGAGTGGCTGCGAACAAGGCGGGGCAGCGGTGGTGGTTGGTACCAGCGA
CCGTGTCTCGCTTGGCGGGGGGGGGGGGGGCAAAGAGGGGACGGGGGAAG
GGGGCGAAGGGCAGCGAGGGGTACAGCAAAACGACGACGACGACGACGAC
GACGACGACGAAAGAGAAGATTTTTTCTTCCCCGTGACGCCGGAGCAGCT
GATTGCGCTAAACCTGGCGGAGATGGCGGCGGGTAAGATGAAAGTCCTTT
GTAGCTGCTGTGTCTCTCGTGCGTGATAAATCGGTGTTTTCCTTGGTATT
TGAAAATACAAGTAGGGGTTGAATATCTCTCTATTTCAATGGTCTGGGAT
GTGTTTGTTGTCAGCTCGACTACGGGTTGTCTTACCTTAGCAATGGCCGC
AAGCCCGGTGGATCCGGATCTGTCGTCGCCTCCTCGATGCTGACGTAGAG
TGGTTCGATCGATATTCGCTGCCTTCTGGCCCACCCCCCTCCACCGTGTA
CCGTGTCACGTTTTCCCCCTCAACGTCTCTTGCTCTGGCACGATTACACA
TACACACGCTCGACGATGACAGGCGACGATATCGTGACGGGAGGCGAGCG
GTCTAGCCTCCAGCAGCGAGAAGCCTGCGACGCCCTTGTGCCGTGGCTCG
TTGCTCTTCTCGCAGCGATGCCGCTCAACCAGGCCTTGCTCCCGCCAGCC
ACCACCGCGACAGCGGCGGCGGACTCAGCACCGAGCGTCCCGGGTCGAAC
ACCAGCATCACCCTCGCATCCACCAGCATCGTCGGCGGTGCGGGGGGGGC
AGGACAGCGCGGGCGGAGGCGCTGTCAACGCAGAGACTGAACGAGTGCGA
CGAAGCATGCGCGAAGAGGCGAGGTCCGCCGTGCTGAGGACGCTGGCGGC
CCTTCTCGCGGGGTGCGGCGGCGGGACTCGACGAGCTGCGACGCCGCGGG
TGCCCCCCCCTCAACGTGCACCCGGAGCCTGCGAGTCGATTCCACCACCG
CCGCCGTCGCCGTCCCTGACCTCGCCGACAGCTGCGCAACCCGAAACAAG
ACTCGTGCCCCTCTGCCTGCGGCTTCTGCGCGGATGCGGGGGCGGCGCAG
CAGCCGAACCCGAGCCCGCGCCCACGGCCAAGCGAGGCACTAGCCCTGCC
GCCCCCGGCAGAGGAGTGCCGGCTACCGCCGCCGCCGCGGCGGTTGCGGT
GGCCGCAACGCCGGGAGTGCCGGTGGGGCGGGCGGGAGAGGCAGCGGGGG
CAGCGGGAGCGGTCGGAGTGTCGAGGGGGGCGCCGGCAGGTCGTAAGGCG
GAGCTGCTGAAGGTGGTCGGCAACGCGTGCTTCCGGTGCCAAGCCGCGCA
GGATCTAGTGCGGGAGGAGGGGGGGTTGCCGCTGGTGCTCAGCCAGTGCG
GCGTTGACGATGCGAACCCTTTGCTCAGGTGAGATGATAGGGCGGGGCCC
CAAGAGGAACAGCGAAAAAACGACGGGTCTCCCTTTCGAGGCATCAATGT
CTCGTCCTTAGTTGAGCCTATATAGTTCGGTTCAGGGAGCCCAATCGCTT
TATTTTGTGGGCGGATGCGCGGGGCTTGTGTTGTTGCGCCTTTGATTCTG
GTGGGTGAGTGGGAGGCGGCGGAAAGTAAGGTAGCTGGGCGGATGGTGTG
GCCGTCGGAGAGAGTTGGCGCTTCTGTTTGGCTGGCACCGTTAGCAAGGG
CGCGCGTGCAGGATTGATACGCCGAGCCCTGCAGACGTACATATGGATGT
ATTTACCACATGTATGGTGGACTGTAGGACCCAAATCGTCCGTCTGTTCG
GTGTTTTCTTTCCGTCTTGCGACCGGGCTTTGAGGGGGGGCCTCAGTGGT
TTCACGCCTTATATGCATATGTTGCATGCCCGTGGCGCTACATACATGCT
TCGTTGTTCGTGGAAACGTGAAGTAAAATTGTCGCACGATTGGTAGGTAC
GAAAGATGCATCACAACAGACGGATTCAATAGCTTGTGCACGCGTGCCTC
GTCTCTGTAACCGCCAAGCATATCCCTCCCCCCCTTCCCTCCCCCCAACT
CACCCGGAATGTTTTCAGAGAGTACGCGCTGCTTGCCGTGAGGAACCTGT
GCGAGGGAAACCCGGCGAACCAGGCATCGATTTCAGCCCTGCAGCCCCAG
GGCAGCACGACTGGCATGGACCAAGCGCTAGCGGACATGGGTCTCGAGGG
GCACGTGAACTCCGAGGGAAACTTTAAGATCGGCCCCCGCCCCTCACAAC
CCAGAGCCCCCTCTGAGTTGTGAGGAGAGAGTGACGGCCAACGGAGGGTA
GAAATAGTTTTCCAGCCAAAAAACACGGAATGATGCTACTTTTATTTAAT
CTTCAAATTGGTTCCTCTGGCCGATGTTTATAGGAAACAAATCTTGAAAA
T back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig981:14608..19108+ >mRNA_L-elsbetiae_contig981.18766.1 ID=mRNA_L-elsbetiae_contig981.18766.1|Name=mRNA_L-elsbetiae_contig981.18766.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4134bp|location=Sequence derived from alignment at L-elsbetiae_contig981:14608..19108+ (Laminarionema elsbetiae ELsaHSoW15) ATGCAGGCGCTCCAATTCGCTGTCGACCAGGCCCCTTTTGCGTGTGGGGC CGCGCCCGCACACCCCGCCGCCGCAGCCGCCGCCGCCGCCGCCGCCACGG TAGTTCGCCAGGAAGGAGCGGCGGCGGCGGTGGCTGCGGCGACGTTAGCG AGCTCGGACACGTCAGGCGTCAGGCTCGCTGTTCGGGCGGGTTTGCAGTT TGCTTGCAACTACTGCGTCGGCAGCGAGGAGAACAAGGCCCTGCTGTGGG GTGTCTGGTTTCCCCGGCGCCTGATGATGCAGGCGCTCCAATTCGCTGTC GACCAGGCCCCTTTTGCGTGTGGGGCCGCGCCCGCACACCCCGCCGCCGC AGCCGCCGCCGCCGCCGCCGCCACGGTAGTTCGCCAGGAAGGAGCGGCGG CGGCGGTGGCTGCGGCGACGTTAGCGAGCTCGGACACGTCAGGCGTCAGG CTCGCTGTTCGGGCGGGTTTGCAGTTTGCTTGCAACTACTGCGTCGGCAG CGAGGAGAACAAGGCCCTGCTGTGGGGTGTCTGGTTTCCCCGGCGCCTGA TGGAGCTGACGAACGTCCTCAAAACGGACCGCGGACTTCTCTCGCTTGCG GTCGCGCTCATCCACAACTGCTGCATATCGCCGCCGCCCCCGCCCCCGCG GGAGCGAAGAGGATACGGGGCAGAGGAGGAAGAGGAGGAGCAGCAGCAGA AGCAGCAGGAGAGGCGAGGAGACAGGGGACGAGAAAGGCTCGGGAGCCTA GTGGCGGACAGGGCGTTTTGTTGCCTCCTCATGAAGGAGCTGACGAACGT CCTCAAAACGGACCGCGGACTTCTCTCGCTTGCGGTCGCGCTCATCCACA ACTGCTGCATATCGCCGCCGCCCCCGCCCCCGCGGGAGCGAAGAGGATAC GGGGCAGAGGAGGAAGAGGAGGAGCAGCAGCAGAAGCAGCAGGAGAGGCG AGGAGACAGGGGACGAGAAAGGCTCGGGAGCCTAGTGGCGGACAGGGCGT TTTGTTGCCTCCTCATGAAGGTGGTCGTTCCTCAAACCCCAGTCGGCGGC AGTGGCAGCACGGGAACATCTCCCGCTTCCCCAAGCACAAGTGGCGCCGA TCCTGATCCCGACCCCGCCGCAGAGTGGCTGTATCTACTCTTCTGCCGCA TCGTCCAGGAGCGCTTGTGCCACGACCTCTACGCCAACGTGGGCATTCGG ACTGGAGGCAGGCAGCGACACCGACCCCAGCGCCAAGCGGTAGCGGCAGT AGCCATGGACCCGAACTCAGTGGCGAGGGTGAAGGGGAGTGGCTGCGAAC AAGGCGGGGCAGCGGTGGTGGTTGGTACCAGCGACCGTGTCTCGCTTGGC GGGGGGGGGGGGGGCAAAGAGGGGACGGGGGAAGGGGGCGAAGGGCAGCG AGGGGTACAGCAAAACGACGACGACGACGACGACGACGACGACGAAAGAG AAGATTTTTTCTTCCCCGTGACGCCGGAGCAGCTGATTGCGCTAAACCTG GCGGAGATGGCGGCGGGTGGTCGTTCCTCAAACCCCAGTCGGCGGCAGTG GCAGCACGGGAACATCTCCCGCTTCCCCAAGCACAAGTGGCGCCGATCCT GATCCCGACCCCGCCGCAGAGTGGCTGTATCTACTCTTCTGCCGCATCGT CCAGGAGCGCTTGTGCCACGACCTCTACGCCAACGTGGGCATTCGGACTG GAGGCAGGCAGCGACACCGACCCCAGCGCCAAGCGGTAGCGGCAGTAGCC ATGGACCCGAACTCAGTGGCGAGGGTGAAGGGGAGTGGCTGCGAACAAGG CGGGGCAGCGGTGGTGGTTGGTACCAGCGACCGTGTCTCGCTTGGCGGGG GGGGGGGGGGCAAAGAGGGGACGGGGGAAGGGGGCGAAGGGCAGCGAGGG GTACAGCAAAACGACGACGACGACGACGACGACGACGACGAAAGAGAAGA TTTTTTCTTCCCCGTGACGCCGGAGCAGCTGATTGCGCTAAACCTGGCGG AGATGGCGGCGGGCGACGATATCGTGACGGGAGGCGAGCGGTCTAGCCTC CAGCAGCGAGAAGCCTGCGACGCCCTTGTGCCGTGGCTCGTTGCTCTTCT CGCAGCGATGCCGCTCAACCAGGCCTTGCTCCCGCCAGCCACCACCGCGA CAGCGGCGGCGGACTCAGCACCGAGCGTCCCGGGTCGAACACCAGCATCA CCCTCGCATCCACCAGCATCGTCGGCGGTGCGGGGGGGGCAGGACAGCGC GGGCGGAGGCGCTGTCAACGCAGAGACTGAACGAGTGCGACGAAGCATGC GCGAAGAGGCGAGGTCCGCCGTGCTGAGGACGCTGGCGGCCCTTCTCGCG GGGTGCGGCGGCGGGACTCGACGAGCTGCGACGCCGCGGGTGCCCCCCCC TCAACGTGCACCCGGAGCCTGCGAGTCGATTCCACCACCGCCGCCGTCGC CGTCCCTGACCTCGCCGACAGCTGCGCAACCCGAAACAAGACTCGTGCCC CTCTGCCTGCGGCTTCTGCGCGGATGCGGGGGCGGCGCAGCAGCCGAACC CGAGCCCGCGCCCACGGCCAAGCGAGGCACTAGCCCTGCCGCCCCCGGCA GAGGAGTGCCGGCTACCGCCGCCGCCGCGGCGGTTGCGGTGGCCGCAACG CCGGGAGTGCCGGTGGGGCGGGCGGGAGAGGCAGCGGGGGCAGCGGGAGC GGTCGGAGTGTCGAGGGGGGCGCCGGCAGGTCGTAAGGCGGAGCTGCTGA AGGTGGTCGGCAACGCGTGCTTCCGGTGCCAAGCCGCGCAGGATCTAGTG CGGGAGGAGGGGGGGTTGCCGCTGGTGCTCAGCCAGTGCGGCGTTGACGA TGCGAACCCTTTGCTCAGGCGACGATATCGTGACGGGAGGCGAGCGGTCT AGCCTCCAGCAGCGAGAAGCCTGCGACGCCCTTGTGCCGTGGCTCGTTGC TCTTCTCGCAGCGATGCCGCTCAACCAGGCCTTGCTCCCGCCAGCCACCA CCGCGACAGCGGCGGCGGACTCAGCACCGAGCGTCCCGGGTCGAACACCA GCATCACCCTCGCATCCACCAGCATCGTCGGCGGTGCGGGGGGGGCAGGA CAGCGCGGGCGGAGGCGCTGTCAACGCAGAGACTGAACGAGTGCGACGAA GCATGCGCGAAGAGGCGAGGTCCGCCGTGCTGAGGACGCTGGCGGCCCTT CTCGCGGGGTGCGGCGGCGGGACTCGACGAGCTGCGACGCCGCGGGTGCC CCCCCCTCAACGTGCACCCGGAGCCTGCGAGTCGATTCCACCACCGCCGC CGTCGCCGTCCCTGACCTCGCCGACAGCTGCGCAACCCGAAACAAGACTC GTGCCCCTCTGCCTGCGGCTTCTGCGCGGATGCGGGGGCGGCGCAGCAGC CGAACCCGAGCCCGCGCCCACGGCCAAGCGAGGCACTAGCCCTGCCGCCC CCGGCAGAGGAGTGCCGGCTACCGCCGCCGCCGCGGCGGTTGCGGTGGCC GCAACGCCGGGAGTGCCGGTGGGGCGGGCGGGAGAGGCAGCGGGGGCAGC GGGAGCGGTCGGAGTGTCGAGGGGGGCGCCGGCAGGTCGTAAGGCGGAGC TGCTGAAGGTGGTCGGCAACGCGTGCTTCCGGTGCCAAGCCGCGCAGGAT CTAGTGCGGGAGGAGGGGGGGTTGCCGCTGGTGCTCAGCCAGTGCGGCGT TGACGATGCGAACCCTTTGCTCAGAGAGTACGCGCTGCTTGCCGTGAGGA ACCTGTGCGAGGGAAACCCGGCGAACCAGGCATCGATTTCAGCCCTGCAG CCCCAGGGCAGCACGACTGGCATGGACCAAGCGCTAGCGGACATGGGTCT CGAGGGGCACGTGAACTCCGAGGGAAACTTTAAGATCGGCCCCCGCCCCT CACAACCCAGAGCCCCCTCTGAGTTGTGAAGAGTACGCGCTGCTTGCCGT GAGGAACCTGTGCGAGGGAAACCCGGCGAACCAGGCATCGATTTCAGCCC TGCAGCCCCAGGGCAGCACGACTGGCATGGACCAAGCGCTAGCGGACATG GGTCTCGAGGGGCACGTGAACTCCGAGGGAAACTTTAAGATCGGCCCCCG CCCCTCACAACCCAGAGCCCCCTCTGAGTTGTGA back to top
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