mRNA_L-elsbetiae_contig981.18764.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig981.18764.1
Unique Name	mRNA_L-elsbetiae_contig981.18764.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot
Match: A0A6H5KZ28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ28_9PHAE)

HSP 1 Score: 277 bits (708), Expect = 4.120e-87
Identity = 174/323 (53.87%), Postives = 207/323 (64.09%), Query Frame = 1

Query:  307 PATRGAPVSAVALRLVFMAFVLLVCRPSLAFTV------LHASVVGSTPGHPRDSFGGSGGGSRGLLGSPLFAVGSGSTS-QNNVAPADGLTTSSTETQNDGGGGHRRKLHPESDVFVPTPGSASLEAALAAGSPHFGDIMGGGEGHKGGQGGS-LLRHFDAMERVVLTANGNLQRVISSYYNSPVTVDIAYCREVEPSVYEREVEISVFGRVFCIAKSLVVLHNPVCAEAVKTGSVGIGQLFRSLDILPNFELLNAGHRTRPSSAFGSDGNGSDSNDVSAGKGREGAA----GGLWRVYDLRSRHVSCRIHEEFPPDLFDLK 1239
            P  R  P  +  L+L   AF  LVC PSL F V      +  S   S      D+   S  GS+      L +V SG    +NNV PA+GL TSS E  N GGGGH R++  +S++F  T G  +LE ALA GS  F  I GG  G K G+    L+ HFDA+ERVVLTAN NLQRVISSYYNSPVTVD+ +C EV P VY+REVEISV G VFC+AKSLVV+H+P CAEAVKTG VG+GQLF SL+ILP FELLNAG R   S+ F      S ++D   G+ +EG      GG WR+YDLRS HVSCRI+EEFPPDLF L+
Sbjct:   19 PTVRKPPWLSTTLKLASAAF--LVCGPSLGFVVGPAAGFIDTSASSSLTRRVVDT---STSGSKSSRRRSLLSVKSGRLDPKNNVTPANGLVTSSMENMNSGGGGHAREVGLQSEIFASTSGFTTLETALA-GSLFFRKINGGRGGDKDGRREEDLIGHFDALERVVLTANANLQRVISSYYNSPVTVDVIFCTEVGPGVYDREVEISVLGHVFCVAKSLVVVHDPACAEAVKTGRVGLGQLFHSLNILPRFELLNAGRRVGRSARF------SGNSDTIGGE-KEGVCTRDDGGFWRLYDLRSGHVSCRIYEEFPPDLFGLE 328

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BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot
Match: A0A835YNG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNG4_9STRA)

HSP 1 Score: 173 bits (439), Expect = 9.650e-48
Identity = 103/215 (47.91%), Postives = 124/215 (57.67%), Query Frame = 1

Query:  616 HPESDVFVPTPGS-------ASLEAALAAGSPHFGDIMGGGEGHKGGQGGSLLRHFDAMERVVLTANGNLQRVISSYYNSPVTVDIAYCREVEPSVYEREVEISVFGRVFCIAKSLVVLHNPVCAEAVKTGSVGIGQLFRSLDILPNFELLNAG-HRTRPSSAFGSDGNGSDSNDVSAGKGREGAAGGLWRVYDLRSRHVSCRIHEEFPPDLFDL 1236
            H  S  F+  P +       +SL   L     HFGDIMGG          ++L  F  MERVVLTANGNLQR+ISSYYN+PV V I  C      VYER V +SV G  FC AKS+VVLH+  C EAV+T SVGIGQLFR LD LP F LL+ G H+  PSS                G     +  G+WR+YDL S+H+SCRI E+F  +LFD+
Sbjct:   73 HHGSQTFLQEPATQQDSKLLSSLSNILIDAPGHFGDIMGGEPASP-----AILARFTPMERVVLTANGNLQRIISSYYNAPVDVHIHQCDRQGEHVYERLVTLSVGGVQFCEAKSIVVLHSDACIEAVETKSVGIGQLFRHLDTLPAFTLLSVGQHQPSPSSQ------------TDTGASPTSSISGIWRIYDLESKHLSCRIQEKFADNLFDM 270

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BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot
Match: A0A7S2L0C0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L0C0_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.270e-32
Identity = 74/185 (40.00%), Postives = 108/185 (58.38%), Query Frame = 1

Query:  721 GHKGGQGGSLLRHF------DAMERVVLTANGNLQRVISSYYNSPVTVDIAYCRE-------VEPSVYEREVEISVFGRVFCIAKSLVVLHNPVCAEAVKTGSVGIGQLFRSLDILPNFELLNAGHRTRPSSAFGSDGNGSDSNDVSAGKGREGAAGGLWRVYDLRSRHVSCRIHEEFPPDLFDL 1236
            G K   GGSL   F       A++R+ LTANGNLQR++SS+Y+SPVTV +  C E           V++R V++ V+ + FC A S + +H P+CAE V++G VG+GQLFR LD LP F+LL+AG RT                           +GG+WR+Y+L+S+ ++C I E+F PD++ +
Sbjct:  143 GLKTTSGGSLQARFGVTPPFSALDRIALTANGNLQRIVSSFYDSPVTVVVNSCVERPRLCASENAGVWDRSVDLKVYNKRFCRATSEITVHEPMCAELVRSGEVGLGQLFRYLDKLPTFDLLDAG-RTE--------------------------SGGMWRLYELKSKELTCSIFEDFSPDVWSM 300

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BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot
Match: W7TDI1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDI1_9STRA)

HSP 1 Score: 129 bits (325), Expect = 4.360e-31
Identity = 74/165 (44.85%), Postives = 97/165 (58.79%), Query Frame = 1

Query:  748 LLRHFDAMERVVLTANGNLQRVISSYYNSPVTVDIAYCREVEPSVYEREVEISVFGRVFCIAKSLVVLHNPVCAEAVKTGSVGIGQLFRSLDILPNFELLNAGHRTRPSSAFGSDGNGSDSNDVSAGKGREGAAGGLWRVYDLRSRH-VSCRIHEEFPPDLFDLK 1239
            L   F  +ERV L+A G+LQR+ISSY+NS VTV I  C E+EP V++REV++SV G VFC A S +    P CA  ++  SVG+GQLFR L + P F LL+ G RT             +  DV   + REG  GG WRVY+L     ++CRI E F  + F  +
Sbjct:  125 LPESFSPLERVALSAEGDLQRIISSYHNSAVTVRIKRCLEIEPGVFDREVDLSVMGHVFCTATSSLSARTPECAHLLREKSVGLGQLFRHLRVYPTFRLLDVG-RTEVEDG--------EERDVEGLREREGG-GGFWRVYELDCPGMINCRILERFSSNTFQFR 279

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BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot
Match: B7G8T3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8T3_PHATC)

HSP 1 Score: 125 bits (313), Expect = 1.190e-28
Identity = 71/181 (39.23%), Postives = 102/181 (56.35%), Query Frame = 1

Query:  763 DAMERVVLTANGNLQRVISSYYNSPVTVDIAYCRE---------------------VEPSVYEREVEISVFGRVFCIAKSLVVLHNPVCAEAVKTGSVGIGQLFRSLDILPNFELLNAG-HRTRPSSAFGSDGNGSDSNDVSAGKGREGAAGGLWRVYDLRSRHVSCRIHEEFPPDLFDLK 1239
            D + R+ LTANGNLQR++SSYY++PV V +  CR+                         V++R V ++VFG+ FC A S++ +++ +C   V++G VG+GQLFR LD+LP F L NAG H+T  + A         +  V  G GR G   G WR Y L    +SCRIHE+F   ++DL+
Sbjct:  186 DPLNRMALTANGNLQRLVSSYYDAPVQVVVDSCRKRSSNVSSNVQIMSRPIQLSGAATAQVWDRVVHLTVFGKTFCTATSVITVYDELCQSLVESGQVGLGQLFRYLDLLPEFTLHNAGVHQTGKTMA---------TKKVGRGGGR-GRGEGFWRDYTLSCAEISCRIHEDFQQGIWDLQ 356

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BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot
Match: A0A7S3WYK2_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WYK2_9SPIT)

HSP 1 Score: 124 bits (312), Expect = 2.050e-28
Identity = 81/198 (40.91%), Postives = 101/198 (51.01%), Query Frame = 1

Query:  646 PGSASLEAALAAGSPHFGDIMGGGEGHKGGQGGSLLRHFDAMERVVLTANGNLQRVISSYYNSPVTVDIAYCREVEPSVYEREVEISVFGRVFCIAKSLVVLHNPVCAEAVKTGSVGIGQLFRSLDILPNFELLNAGHRTRPSSAFGSDGNGSDSNDVSAGKGREGAAGGLWRVYDLRSRHVSCRIHEEFPPDLFDLK 1239
            P  AS+ A   A   H GDIMG         G   LR F+ + RVV+TANGNLQR+ISSY+N+ V V   + R+V    +EREV +  FG  F +A S V +    C EA+ TG V IGQLFR L+ILP FELL AG+                        GR+      WR Y L    + C+IHE    D+F LK
Sbjct:    5 PAPASMAAPKRA-EAHLGDIMG---SEPPTNGSPALRDFEPLHRVVVTANGNLQRLISSYHNTRVEVRQVHSRQVAEGRFEREVVLVCFGVEFAVATSTVEISRADCLEAITTGGVAIGQLFRHLNILPVFELLGAGYE----------------------HGRQH----FWRDYLLSGEGIHCKIHERIRSDVFALK 172

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BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot
Match: A0A7S1C1D9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C1D9_9STRA)

HSP 1 Score: 119 bits (298), Expect = 6.480e-28
Identity = 72/184 (39.13%), Postives = 104/184 (56.52%), Query Frame = 1

Query:  712 GGEGHKGGQGGSLLRHFDAMERVVLTANGNLQRVISSYYNSPVTVDI--------AYCREVEPSVYEREVEISVFGRVFCIAKSLVVLHNPVCAEAVKTGSVGIGQLFRSLDILPNFELLNAGHRTRPSSAFGSDGNGSDSNDVSAGKGREGAAGGLWRVYDLRSRHVSCRIHEEFPPDLFDLK 1239
            GGEG +  +  +L+     ++R+ LTANGNLQR++SS+Y++PV+V +        A  R V  +V++R V + V    FC A S+V +H+  CA  V++G +G+GQLFR LD LP FEL++AG RTR   + G DG   D              G LWR Y L    + C I EEF  D + ++
Sbjct:   36 GGEGRRSRRRDALVAALSPLDRIALTANGNLQRIVSSFYDAPVSVVVVRNEERASAASRRVPSAVWDRSVALVVHDTTFCRAASVVTVHDAGCAALVRSGKIGLGQLFRHLDRLPKFELVDAG-RTR---SIGVDGGADDE-------------GRLWRRYRLWCDELECDILEEFVADTWSIR 202

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BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot
Match: A0A0L0FYY7_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FYY7_9EUKA)

HSP 1 Score: 119 bits (299), Expect = 7.170e-28
Identity = 79/206 (38.35%), Postives = 102/206 (49.51%), Query Frame = 1

Query:  622 ESDVFVPTPGSASLEAALAAGSPHFGDIMGGGEGHKGGQGGSLLRHFDAMERVVLTANGNLQRVISSYYNSPVTVDIAYCR-EVEPSVYEREVEISVFGRVFCIAKSLVVLHNPVCAEAVKTGSVGIGQLFRSLDILPNFELLNAGHRTRPSSAFGSDGNGSDSNDVSAGKGREGAAGGLWRVYDLRSRHVSCRIHEEFPPDLFDL 1236
            ES      P +A+  A   A  PH GD+MG            L   F  +ER+VLTANG LQR+ISSYYN+ VTV I + R   +   Y+REVE+ +F +VFCIA S + L      + V+   +G+GQLFR L++LP F LL  G                               GGL R Y L+S  ++CRI E FP  LF L
Sbjct:   59 ESTPLHTPPANATATALKEA--PHLGDLMGWRTTFT-----ELPGQFTGLERIVLTANGTLQRIISSYYNAEVTVKIRHNRPRTDQGWYDREVELLIFDQVFCIATSEIHLDRKEYVDLVEINRIGLGQLFRHLNLLPFFHLLKVGRNPE---------------------------GGLKRTYTLQSPGITCRITETFPRKLFTL 230

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BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot
Match: A0A0L0HN02_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HN02_SPIPD)

HSP 1 Score: 119 bits (297), Expect = 7.710e-28
Identity = 74/192 (38.54%), Postives = 95/192 (49.48%), Query Frame = 1

Query:  691 HFGDIMGGGEGHKGGQGGSLLRHFDAMERVVLTANGNLQRVISSYYNSPVTVDIAYCREVEP---------SVYEREVEISVFGRVFCIAKSLVVLHNPVCAEAVKTGSVGIGQLFRSLDILPNFELLNAGHRTRPSSAFGSDGNGSDSNDVSAGKGREGAAGGLWRVYDLRSRHVSCRIHEEFPPDLFDLK 1239
            HFGDIM   E         L   F  MER++LTANGN+QR++S+YYNS V+VDI +   +           SV+ REV +    ++ C AKS V + +P     +    VGIGQLFR L+ILP FELL  G                                  WR YDLRS  V+CRI EEFP  +F+L+
Sbjct:   32 HFGDIMSSRETTL-----ILPTDFSPMERILLTANGNVQRILSAYYNSTVSVDIIHNELINEESASNAETESVFRREVNLRCLNQICCNAKSTVTITDPEYLRLILEQQVGIGQLFRYLNILPEFELLQVGRTVNS----------------------------FWREYDLRSNGVNCRIREEFPLGVFNLQ 190

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BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot
Match: L8HDT3_ACACA (Uncharacterized protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDT3_ACACA)

HSP 1 Score: 115 bits (288), Expect = 1.420e-26
Identity = 75/184 (40.76%), Postives = 96/184 (52.17%), Query Frame = 1

Query:  691 HFGDIMGGGEGHKGGQGGSLLRHFDAMERVVLTANGNLQRVISSYYNSPVTVDIAYCREV-EPSVYEREVEISVFGRVFCIAKSLVVLHNPVCAEAVKTGSVGIGQLFRSLDILPNFELLNAGHRTRPSSAFGSDGNGSDSNDVSAGKGREGAAGGLWRVYDLRSRHVSCRIHEEFPPDLFDLK 1239
            HFGDI+   E         L   F  +ER+VL+ANGNLQR++S+YYNSPV+V+I     V + S++EREV ++ FG+ FC AKS V +        V    VGIGQLF  L +LP+F LL AG                          R G    LWR Y L +  + C I EEF  DLFDL+
Sbjct:   51 HFGDILAPREITT-----VLPAGFTGLERIVLSANGNLQRLMSAYYNSPVSVEIIKNDRVGQTSIFEREVNLTCFGKAFCNAKSTVTIKKEEHLRLVLEEKVGIGQLFFHLRLLPSFVLLQAG--------------------------RSGGVS-LWREYRLEADSIVCEIREEFVADLFDLR 202

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig981.18764.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KZ28_9PHAE	4.120e-87	53.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YNG4_9STRA	9.650e-48	47.91	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A7S2L0C0_9STRA	1.270e-32	40.00	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
W7TDI1_9STRA	4.360e-31	44.85	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
B7G8T3_PHATC	1.190e-28	39.23	Predicted protein n=2 Tax=Phaeodactylum tricornutu...	[more]
A0A7S3WYK2_9SPIT	2.050e-28	40.91	Hypothetical protein n=1 Tax=Strombidinopsis acumi...	[more]
A0A7S1C1D9_9STRA	6.480e-28	39.13	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A0L0FYY7_9EUKA	7.170e-28	38.35	Uncharacterized protein n=1 Tax=Sphaeroforma arcti...	[more]
A0A0L0HN02_SPIPD	7.710e-28	38.54	Uncharacterized protein n=2 Tax=Spizellomyces TaxI...	[more]
L8HDT3_ACACA	1.420e-26	40.76	Uncharacterized protein n=1 Tax=Acanthamoeba caste...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig981	contig	L-elsbetiae_contig981:10204..13350 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	126.7
Seed ortholog evalue	2.3e-26
Seed eggNOG ortholog	2850.Phatr48906
Hectar predicted targeting category	other localisation
EggNOG OGs	2DIV6@1,2RWUQ@2759,2XDTI@2836
Best tax level	Bacillariophyta
Best eggNOG OG	NA\|NA\|NA
Exons	5
Model size	1242
Cds size	1155
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig981.18764.1	prot_L-elsbetiae_contig981.18764.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig981 10204..13263 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817042.643138-CDS-L-elsbetiae_contig981:10203..10500	1622817042.643138-CDS-L-elsbetiae_contig981:10203..10500	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig981 10204..10500 -
1691684003.9131072-CDS-L-elsbetiae_contig981:10203..10500	1691684003.9131072-CDS-L-elsbetiae_contig981:10203..10500	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig981 10204..10500 -
1622817042.6555614-CDS-L-elsbetiae_contig981:11041..11168	1622817042.6555614-CDS-L-elsbetiae_contig981:11041..11168	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig981 11042..11168 -
1691684003.9302447-CDS-L-elsbetiae_contig981:11041..11168	1691684003.9302447-CDS-L-elsbetiae_contig981:11041..11168	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig981 11042..11168 -
1622817042.669131-CDS-L-elsbetiae_contig981:11451..11612	1622817042.669131-CDS-L-elsbetiae_contig981:11451..11612	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig981 11452..11612 -
1691684003.941628-CDS-L-elsbetiae_contig981:11451..11612	1691684003.941628-CDS-L-elsbetiae_contig981:11451..11612	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig981 11452..11612 -
1622817042.68167-CDS-L-elsbetiae_contig981:11967..12369	1622817042.68167-CDS-L-elsbetiae_contig981:11967..12369	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig981 11968..12369 -
1691684003.952166-CDS-L-elsbetiae_contig981:11967..12369	1691684003.952166-CDS-L-elsbetiae_contig981:11967..12369	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig981 11968..12369 -
1622817042.6938992-CDS-L-elsbetiae_contig981:13095..13263	1622817042.6938992-CDS-L-elsbetiae_contig981:13095..13263	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig981 13096..13263 -
1691684003.9626274-CDS-L-elsbetiae_contig981:13095..13263	1691684003.9626274-CDS-L-elsbetiae_contig981:13095..13263	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig981 13096..13263 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622817042.7112367-UTR-L-elsbetiae_contig981:13263..13350	1622817042.7112367-UTR-L-elsbetiae_contig981:13263..13350	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig981 13264..13350 -
1691684003.9731832-UTR-L-elsbetiae_contig981:13263..13350	1691684003.9731832-UTR-L-elsbetiae_contig981:13263..13350	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig981 13264..13350 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig981:10204..13350-
coding sequence from alignment at L-elsbetiae_contig981:10204..13350-

protein sequence of mRNA_L-elsbetiae_contig981.18764.1

>prot_L-elsbetiae_contig981.18764.1 ID=prot_L-elsbetiae_contig981.18764.1|Name=mRNA_L-elsbetiae_contig981.18764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=385bp
MHRYLHLGWVGETTRRGDIPQSGHLPNRRRRDRQGRKGRGVDQLSKKMEG
AFSSTEGRPRRATSRKRGGRGVTPATRGAPVSAVALRLVFMAFVLLVCRP
SLAFTVLHASVVGSTPGHPRDSFGGSGGGSRGLLGSPLFAVGSGSTSQNN
VAPADGLTTSSTETQNDGGGGHRRKLHPESDVFVPTPGSASLEAALAAGS
PHFGDIMGGGEGHKGGQGGSLLRHFDAMERVVLTANGNLQRVISSYYNSP
VTVDIAYCREVEPSVYEREVEISVFGRVFCIAKSLVVLHNPVCAEAVKTG
SVGIGQLFRSLDILPNFELLNAGHRTRPSSAFGSDGNGSDSNDVSAGKGR
EGAAGGLWRVYDLRSRHVSCRIHEEFPPDLFDLK*

mRNA from alignment at L-elsbetiae_contig981:10204..13350-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig981.18764.1 ID=mRNA_L-elsbetiae_contig981.18764.1|Name=mRNA_L-elsbetiae_contig981.18764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3147bp|location=Sequence derived from alignment at L-elsbetiae_contig981:10204..13350- (Laminarionema elsbetiae ELsaHSoW15)
CGGTCAAGGCCCGCTCAACGGCCGAAGATTAGAAAGTGTTACGGATTCTT
GGTTCCCCGACTACGTTTCCCCGTACCCGCCTGACCGATGCATCGATACC
TTCACCTTGGTTGGGTAGGGGAAACAACGCGGCGCGGTGACATCCCGCAG
AGCGGACACCTACCGAATAGAAGGCGACGCGATAGACAGGGAAGGAAAGG
GAGAGGAGTAGACCAACTGAGCAAGAAGATGGAGGGCGCCTTCAGCAGTA
CTGAGGTTCGTGATGTCTATGGACTACGTAAAATGTATACCCAGTAGTCT
AGTCTGGGAATATACACTGCTGTGAGCATCTTGGAGATCGTGATGACGAC
GTACAACCAACACCCAGACACACACGAACTCATGGAGCGGTCGTTCTATC
GTTCGCCAGAGACGTTAAGTCGAACTACTGCTGTGTGGAAATACTTGTTT
GTCCGACAGACCTGCTTTATGTTGACTTTTGGCGTGGCCTGGTTGATGAA
TCGTGGGCCGGGAAACGCCCGTTCACAGACCCATATTTTCTCTGAGAATT
GCCAGCGTCTCGTGTACATATGGATGTACTCGCTCGCTGGCAATTTACTG
CCGCCAGAACCCGGCGTGTGGGAGAGACGGGTCGACCAGGCTACATAGCC
TGGTGATATTTGTGCCGGGCGAGGGGCGGTTTTGTGAGCAGTGGACCAAG
GTGGGTCAAATCAAGCTGCCCCGGCGCGGCATCGCGAACCCAGCGGATTA
ATCGTGTACGTAGCTGATCGTGTACGTAGCAGGTTCATGTTCCTGACGCC
GGGTTGGATGGAACGTTAACGATAACGAGCCCTCTGAAAATACGCAACAC
TTTACATTGATGTATCAGTTCATCGTTGTCGTCATCGTCGTCGTGCCAGG
TTTGAATCGTTGCAAATTCGTATCATTCAGTATTTTCCGACAAATGTTCT
GCTTCGTTTTTCTTCCCCTCCCTGGCAGCAGGGGCGACCTAGAAGGGCAA
CGAGCAGAAAAAGAGGAGGAAGAGGAGTAACTCCAGCAACCCGGGGGGCG
CCAGTCTCCGCGGTGGCTCTGAGACTCGTTTTCATGGCCTTCGTCCTCCT
CGTTTGCCGTCCGTCGCTGGCCTTCACCGTCCTCCATGCGTCCGTCGTTG
GCAGCACCCCTGGTCATCCTCGCGACAGCTTTGGCGGCAGCGGCGGCGGC
AGCAGAGGCTTGCTAGGCAGCCCTCTATTTGCCGTTGGTAGCGGTAGCAC
GTCTCAAAACAACGTGGCACCGGCAGACGGCCTCACGACCAGTTCCACGG
AGACCCAGAACGACGGGGGAGGGGGGCACAGACGGAAGCTGCACCCAGAA
TCGGACGTTTTTGTGCCGACGCCAGGTTCTGCTGTGAGTTTGGACTTGCT
TCTTACTGTCGCCATTGCGGCTGTTGCTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGCTGTTCTTGTTTTCGCTACCGCCAGCATCGCGTCGGCA
GCTGCGTTGTGTAATGCTCGCGTTGGGTGTTCTGAATACTTCTGCAGCGA
CGGCAGGGCACCCGCCATTTTTAACTTCTCAGGTTCTGTCGCACAATTCC
GTATTGCTCCTTGGTTCGTGATTTCCGCACGCTGCCTGCCTTTTCTGCCC
CCCCACCCCCCACCCCCTTCACTCGAACGTACGTTGGCCCTGTTAACCTT
GACATCCAAATCACCGAAAACCACGGCAACAAAAACAGAGCCTCGAGGCA
GCCCTCGCAGCAGGGTCACCGCACTTCGGGGACATCATGGGCGGAGGCGA
GGGCCACAAGGGAGGACAAGGAGGCAGCCTCTTGCGTCATTTCGACGCGA
TGGAACGGGTGGTGCTGACCGCGAACGGGAATCTTCAGCGGGTCATCAGG
TTGGCCTATTGTACGTAGCGTTGATACCTTGAGCGCCGACTGAGAACTCT
TTGCGACCAGAGGTTTACGTTCTTGGGCCTGTGTGTGGTTGGCTTGATTG
CGATATGTGAGCACCGCTGTGGCCCCCTCGCCCTCCTATTCGGAGTATTT
GAGCCGCGGGGTTCATCTGGAGAATAAATAGATGCCTGGTCACCCGCTGT
AAGTGGTGCAATCGACGGCTGAGGGAACAAGAAAAGACTGGGGTACTCCT
TGCCCCCCGCCCCCCGTACCCCGTTGTCGCAGCTCGTACTACAACTCCCC
GGTGACTGTGGACATCGCGTACTGCAGGGAAGTCGAGCCGTCCGTGTACG
AACGTGAGGTTGAGATATCTGTGTTCGGCCGCGTTTTCTGCATCGCCAAG
AGCCTTGTGGTGAGTCACCTCGATAGACCGCGGTCTGAAAAACAAGCCTA
TAGCAATCCGAAAAAATGATCCACCCAGATGGTGGTAAGCAGCCCGCGGG
GGAAACACTAGTAACACTGCGACAAGCTTGCGTTCTCCGCCGGGTGTTCC
AAAAACAATATTGTACCCATCCCCCCAAGAAAAAGCCCCATTGAGCGAAA
ATACTCGCCACCCCCGCGTTTCAGTGTGTATGACTGTGTGGCACCCCTTC
TCTACAGATCCCGCAAATGACCTAAGCGACCCGTGCAGTTTAAAGTCCTC
GCGCCGTTGTTCTCCAAGGACGTGTAGATGTGCGTCACTGTTGATGTCCA
AACGCCCCTGTGTCTCCTCCCATCCAGCCAACCTCACGACGAAAAGTTTC
GCACAACCCAGCTCTTGCTCTTGAGCTCATAAATCATATCGGTCGACTGT
CGATTTCTTCGTATATCTGTATATACCTTTGCCTGTTTCTCTCCCTCCCT
TACCTTCCTACTTTTTTCTGCGGTTTCGAACTACGGAACGGCCAAAAAAG
GTTCTGCACAATCCGGTGTGCGCAGAGGCCGTCAAGACCGGCAGCGTGGG
CATTGGGCAGCTGTTCCGATCCCTCGACATCCTGCCGAACTTCGAGCTGC
TCAACGCCGGCCACCGTACGCGGCCTTCCTCGGCGTTCGGGAGCGACGGC
AACGGTAGCGACAGCAATGATGTGAGTGCGGGGAAGGGCCGAGAGGGGGC
TGCGGGGGGGCTCTGGAGAGTCTACGACTTACGCAGCCGGCACGTGAGCT
GCCGCATACACGAAGAGTTCCCGCCGGACTTGTTCGACCTCAAGTAA

Coding sequence (CDS) from alignment at L-elsbetiae_contig981:10204..13350-

>mRNA_L-elsbetiae_contig981.18764.1 ID=mRNA_L-elsbetiae_contig981.18764.1|Name=mRNA_L-elsbetiae_contig981.18764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2310bp|location=Sequence derived from alignment at L-elsbetiae_contig981:10204..13350- (Laminarionema elsbetiae ELsaHSoW15)
ATGCATCGATACCTTCACCTTGGTTGGGTAGGGGAAACAACGCGGCGCGG
TGACATCCCGCAGAGCGGACACCTACCGAATAGAAGGCGACGCGATAGAC
AGGGAAGGAAAGGGAGAGGAGTAGACCAACTGAGCAAGAAGATGGAGGGC
GCCTTCAGCAGTACTGAGATGCATCGATACCTTCACCTTGGTTGGGTAGG
GGAAACAACGCGGCGCGGTGACATCCCGCAGAGCGGACACCTACCGAATA
GAAGGCGACGCGATAGACAGGGAAGGAAAGGGAGAGGAGTAGACCAACTG
AGCAAGAAGATGGAGGGCGCCTTCAGCAGTACTGAGGGGCGACCTAGAAG
GGCAACGAGCAGAAAAAGAGGAGGAAGAGGAGTAACTCCAGCAACCCGGG
GGGCGCCAGTCTCCGCGGTGGCTCTGAGACTCGTTTTCATGGCCTTCGTC
CTCCTCGTTTGCCGTCCGTCGCTGGCCTTCACCGTCCTCCATGCGTCCGT
CGTTGGCAGCACCCCTGGTCATCCTCGCGACAGCTTTGGCGGCAGCGGCG
GCGGCAGCAGAGGCTTGCTAGGCAGCCCTCTATTTGCCGTTGGTAGCGGT
AGCACGTCTCAAAACAACGTGGCACCGGCAGACGGCCTCACGACCAGTTC
CACGGAGACCCAGAACGACGGGGGAGGGGGGCACAGACGGAAGCTGCACC
CAGAATCGGACGTTTTTGTGCCGACGCCAGGTTCTGCTGGGCGACCTAGA
AGGGCAACGAGCAGAAAAAGAGGAGGAAGAGGAGTAACTCCAGCAACCCG
GGGGGCGCCAGTCTCCGCGGTGGCTCTGAGACTCGTTTTCATGGCCTTCG
TCCTCCTCGTTTGCCGTCCGTCGCTGGCCTTCACCGTCCTCCATGCGTCC
GTCGTTGGCAGCACCCCTGGTCATCCTCGCGACAGCTTTGGCGGCAGCGG
CGGCGGCAGCAGAGGCTTGCTAGGCAGCCCTCTATTTGCCGTTGGTAGCG
GTAGCACGTCTCAAAACAACGTGGCACCGGCAGACGGCCTCACGACCAGT
TCCACGGAGACCCAGAACGACGGGGGAGGGGGGCACAGACGGAAGCTGCA
CCCAGAATCGGACGTTTTTGTGCCGACGCCAGGTTCTGCTAGCCTCGAGG
CAGCCCTCGCAGCAGGGTCACCGCACTTCGGGGACATCATGGGCGGAGGC
GAGGGCCACAAGGGAGGACAAGGAGGCAGCCTCTTGCGTCATTTCGACGC
GATGGAACGGGTGGTGCTGACCGCGAACGGGAATCTTCAGCGGGTCATCA
GAGCCTCGAGGCAGCCCTCGCAGCAGGGTCACCGCACTTCGGGGACATCA
TGGGCGGAGGCGAGGGCCACAAGGGAGGACAAGGAGGCAGCCTCTTGCGT
CATTTCGACGCGATGGAACGGGTGGTGCTGACCGCGAACGGGAATCTTCA
GCGGGTCATCAGCTCGTACTACAACTCCCCGGTGACTGTGGACATCGCGT
ACTGCAGGGAAGTCGAGCCGTCCGTGTACGAACGTGAGGTTGAGATATCT
GTGTTCGGCCGCGTTTTCTGCATCGCCAAGAGCCTTGTGCTCGTACTACA
ACTCCCCGGTGACTGTGGACATCGCGTACTGCAGGGAAGTCGAGCCGTCC
GTGTACGAACGTGAGGTTGAGATATCTGTGTTCGGCCGCGTTTTCTGCAT
CGCCAAGAGCCTTGTGGTTCTGCACAATCCGGTGTGCGCAGAGGCCGTCA
AGACCGGCAGCGTGGGCATTGGGCAGCTGTTCCGATCCCTCGACATCCTG
CCGAACTTCGAGCTGCTCAACGCCGGCCACCGTACGCGGCCTTCCTCGGC
GTTCGGGAGCGACGGCAACGGTAGCGACAGCAATGATGTGAGTGCGGGGA
AGGGCCGAGAGGGGGCTGCGGGGGGGCTCTGGAGAGTCTACGACTTACGC
AGCCGGCACGTGAGCTGCCGCATACACGAAGAGTTCCCGCCGGACTTGTT
CGACCTCAAGTAAGTTCTGCACAATCCGGTGTGCGCAGAGGCCGTCAAGA
CCGGCAGCGTGGGCATTGGGCAGCTGTTCCGATCCCTCGACATCCTGCCG
AACTTCGAGCTGCTCAACGCCGGCCACCGTACGCGGCCTTCCTCGGCGTT
CGGGAGCGACGGCAACGGTAGCGACAGCAATGATGTGAGTGCGGGGAAGG
GCCGAGAGGGGGCTGCGGGGGGGCTCTGGAGAGTCTACGACTTACGCAGC
CGGCACGTGAGCTGCCGCATACACGAAGAGTTCCCGCCGGACTTGTTCGA
CCTCAAGTAA