prot_L-elsbetiae_contig980.18756.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig980.18756.1
Unique Nameprot_L-elsbetiae_contig980.18756.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length124
Homology
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: D7FPR2_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR2_ECTSI)

HSP 1 Score: 242 bits (617), Expect = 6.330e-81
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0
Query:    1 MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDTFVDKFMAGTS 123
            MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKD F+DKFMAGTS
Sbjct:    1 MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDDFMDKFMAGTS 123          
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A7S2XV13_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV13_9STRA)

HSP 1 Score: 115 bits (288), Expect = 7.190e-31
Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = 0
Query:   22 SPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDTFVDKFMAGT 122
            +P  QLYR I KE+PR++ IYDVDM   +A AAIA +FR + H+KD RV+D LV KGYM +EE TMQYKQKTHL+ +L+P   ++     +TF +KF  GT
Sbjct:   18 NPVLQLYRKILKELPRVMIIYDVDMPKEEANAAIAYHFRKSAHVKDERVIDLLVAKGYMHVEEATMQYKQKTHLMSILDPWELSEKFKEPETFEEKFYKGT 118          
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A4D9D5Z3_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z3_9STRA)

HSP 1 Score: 115 bits (288), Expect = 8.320e-31
Identity = 56/102 (54.90%), Postives = 74/102 (72.55%), Query Frame = 0
Query:   22 SPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDAR-AVKDTFVDKFMAGT 122
            +P  QLYR I+KE+PR+LTIYD D+  A+ARA + + FR N HL+DP +VD LV KGYM+LEET MQ+KQKTHLLRLL        +   K+TF +KF++ +
Sbjct:   18 NPVVQLYRTISKELPRVLTIYDADLAPAEARAQVQVLFRKNAHLQDPVIVDMLVKKGYMELEETLMQWKQKTHLLRLLAADTEAPRKYREKNTFTEKFLSNS 119          
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A835YPN0_9STRA (NADH dehydrogenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.300e-30
Identity = 55/99 (55.56%), Postives = 72/99 (72.73%), Query Frame = 0
Query:    1 MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLL 99
            +A GL N + KS G    G+ +P   LYR+I +E+PR+LTIYDVDMD A AR  +   FR NGHL+DP V+  +V KGYM+LEET +Q+KQ+THL+RLL
Sbjct:    1 VAQGLRNAIFKSGGGFLGGSTAPIMDLYRSICREIPRVLTIYDVDMDPAVARRKVNELFRKNGHLQDPEVIKIVVSKGYMELEETVLQFKQRTHLMRLL 99          
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A067CET6_SAPPC (Complex1_LYR_dom domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CET6_SAPPC)

HSP 1 Score: 105 bits (261), Expect = 9.230e-27
Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 0
Query:   22 SPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSA--HNDARAVKDTF---VDKFMAG 121
            +PA  LYR I K+VPR+LT+YD++M+  +AR A+  +FR N  +KDPRV+D L+ K  M+LEET MQ+KQK+HLL LL+      N+   V D F   +D F AG
Sbjct:    8 NPAVTLYRHITKQVPRVLTLYDINMEPREARLAVQAFFRKNAEIKDPRVIDMLISKANMELEETLMQWKQKSHLLTLLDSGVKLQNEKNVVYDDFEEGLDNFFAG 112          
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: K3W7P5_GLOUD (Complex1_LYR_dom domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7P5_GLOUD)

HSP 1 Score: 105 bits (262), Expect = 1.050e-26
Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = 0
Query:   20 TASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSA------HNDARAVKDTFVDKFMAG 121
            T+SPA  LYR I K+VPR+LT+YD+ M+ A+AR A+   FR +  +KDPRVVD L+ K  M+LEET MQ+KQK HLL LL   A       ND + V+D+  + F AG
Sbjct:   14 TSSPAVTLYRYITKQVPRVLTLYDISMEPAEARLAVQALFRKHADVKDPRVVDMLITKANMELEETLMQWKQKVHLLTLLESGAALRADKKNDVKTVEDSLAN-FYAG 120          
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A7S1U9Y6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9Y6_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.190e-26
Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 0
Query:   21 ASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDTFVDK 117
            A+PA QL+R I K + R+LTIYD+++  A+AR+AIA  FRNNGH+KDPR+VD LV KGY+ LEET +Q+KQK HL +LL+     +     D  ++K
Sbjct:   47 AAPARQLFRDICKNLGRVLTIYDLNITTAEARSAIAQRFRNNGHIKDPRIVDVLVAKGYLHLEETLLQHKQKNHLWQLLDNEEGKNFPGAPDDALEK 143          
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A7S1XWB6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWB6_9STRA)

HSP 1 Score: 105 bits (263), Expect = 1.220e-26
Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 0
Query:   21 ASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDTFVDK 117
            A+PA QL+R I K + R+LTIYD+++  A+AR+AIA  FRNNGH+KDPR+VD LV KGY+ LEET +Q+KQK HL +LL+     +     D  ++K
Sbjct:   48 AAPARQLFRDICKNLGRVLTIYDLNITTAEARSAIAQRFRNNGHIKDPRIVDVLVAKGYLHLEETLLQHKQKNHLWQLLDNEEGKNFPGAPDDALEK 144          
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A1V9YKZ4_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKZ4_9STRA)

HSP 1 Score: 103 bits (256), Expect = 6.260e-26
Identity = 52/112 (46.43%), Postives = 75/112 (66.96%), Query Frame = 0
Query:   10 MKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDTFVDKFMAG 121
            ++  G    GT +PA  LYR I K+VPR+LT+YD++M+  +AR A+  +FR N  +KDPRV+D L+ K  M+LEET MQ+KQK HL+ LL+  A    +A KD+  D++  G
Sbjct:    3 LRLTGSKLLGT-NPAVTLYRHITKQVPRVLTLYDINMEPREARLAVQAFFRKNAEIKDPRVIDMLISKANMELEETLMQWKQKAHLVTLLDSGAK--LQAEKDSVFDEYEDG 111          
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Match: A0A7S3GV22_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GV22_9STRA)

HSP 1 Score: 102 bits (255), Expect = 9.130e-26
Identity = 48/77 (62.34%), Postives = 60/77 (77.92%), Query Frame = 0
Query:   25 TQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNP 101
            +QLYR+I KE+PR+L IYDVDM    A+ AI  +FR +GHLKD  V+  L+ KGYM+LEET MQ+KQKTHLLR+L P
Sbjct:   21 SQLYRSIIKELPRVLIIYDVDMPMKTAKTAIQYHFRKHGHLKDGNVIGMLMAKGYMELEETLMQWKQKTHLLRVLEP 97          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig980.18756.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPR2_ECTSI6.330e-8198.37NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus... [more]
A0A7S2XV13_9STRA7.190e-3154.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D5Z3_9STRA8.320e-3154.90Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A835YPN0_9STRA2.300e-3055.56NADH dehydrogenase (Fragment) n=1 Tax=Tribonema mi... [more]
A0A067CET6_SAPPC9.230e-2749.52Complex1_LYR_dom domain-containing protein n=2 Tax... [more]
K3W7P5_GLOUD1.050e-2650.93Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A7S1U9Y6_9STRA1.190e-2652.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1XWB6_9STRA1.220e-2652.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1V9YKZ4_9STRA6.260e-2646.43Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A7S3GV22_9STRA9.130e-2662.34Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 24..84
e-value: 5.5E-5
score: 23.1
IPR016488NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6PANTHERPTHR12964NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNITcoord: 24..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig980contigL-elsbetiae_contig980:22552..25704 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig980.18756.1mRNA_L-elsbetiae_contig980.18756.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig980 22552..25704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig980.18756.1 ID=prot_L-elsbetiae_contig980.18756.1|Name=mRNA_L-elsbetiae_contig980.18756.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=124bp
MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQ
ARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLN
PSAHNDARAVKDTFVDKFMAGTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR
IPR016488NADH_Ub_cplx-1_asu_su-6