mRNA_L-elsbetiae_contig9792.18746.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig9792.18746.1 vs. uniprot
Match: A0A6H5JQL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQL4_9PHAE) HSP 1 Score: 230 bits (586), Expect = 4.940e-66 Identity = 151/390 (38.72%), Postives = 220/390 (56.41%), Query Frame = 1 Query: 10 LGNPAPFVAAGRVTPTLPPTAQPSRD--GGTSGEGRPGAHMNLVMKKMCLEAILKKFQITRAAGYKGAGGPFLWKTTNSDYATQQKPLYEGVKAEWLKLPLAQRQTYGCSNTATPAYPAMSTSKAFLSKAKTQYLQFKNTPNNTSAGRFWKDVAVTMEAIITLDQASSNDGDGSDARSESTESAQKK-----EDKVRTRDAHDKLQDLTGSLAEQAREM----GRPREAAERAEKVAQEHLETSKGLVVLLKESNQLAAAQAVEDAEFRESQQASTALHRETQRQDRIARDK--KTDAQHDQMAGILSTEYKTPEGGVVIPWDSYSEFWEALPNTPPATREIVEEQLPTLDVLISMAKDKDFAAELKEAGVPGLLAKRISKFVATAVYVT 1140 +G+ AP G T P + P R GG SG G MCLE IL + + TRA GY G F WKTT+++Y Q+PL++ V A+WL+LPL R+ +GC+N +P +TSK F++ AK ++ + K+ +TS G+FW ++ + AI +D+ASSNDGDG+ AR+EST+ AQK ED A + D+ SL QA M G+ E AE+ +AQ L+ + E AE+ +++ T +R ++Q ++A D+ + + QH +M +LS K P GGV+ WDSY EFW ALPN P A R+I+ E +P++D L+SMA+DK+F LKEA VP L+AKR++KFV + Y+T Sbjct: 241 IGSSAPPAPGGLPAFTAAPASSPVRPSRGGRSGRSAWG---------MCLEEILSRMRSTRAGGY--TGRKFYWKTTDAEYNRTQRPLFQAVAAKWLELPLEDRRKWGCANDGDATFPTKNTSKHFITNAKNEWQKKKS--QSTSTGQFWNSMSPIISAIQEIDKASSNDGDGTSARNESTDQAQKARAQRLEDARNQAAAAGNVGDMMESLQAQAESMSQGNGKTVELAEKQAALAQRALDAQE------------------ESAEYAKARDQKTDDYR--RQQTKMAEDRFAQANVQHAEMMDVLSNTLKAPPGGVITQWDSYEEFWVALPNIPVAVRDIIMENVPSVDELVSMAEDKNFWETLKEANVPVLVAKRLAKFVQKSCYLT 597
BLAST of mRNA_L-elsbetiae_contig9792.18746.1 vs. uniprot
Match: A0A6H5KEL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEL2_9PHAE) HSP 1 Score: 108 bits (269), Expect = 6.590e-23 Identity = 73/193 (37.82%), Postives = 109/193 (56.48%), Query Frame = 1 Query: 568 DKVRTRDAHDKLQDLTG---SLAEQAREMG-RPREAAERAEKVAQEHLETSKGLVVLLKESNQLAAAQAVEDAEFRESQQASTALHRETQRQDRIARDKKTDAQHDQMAGILSTEYKTPEGGVVIPWDSYSEFWEALPNTPPATREIVEEQLPTLDVLISMAKDKDFAAELKEAGVPGLLAKRISKFVATAVY 1134 D+ + +DA + ++T SL +QA+ +G R ERAEK LE + ++ + AQA + A +++ A T +R+ + R KK D QH+++ +S+ ++TP GVVI WDSY E+WE LPN P A +V + LPTL L+ +AKDK+FAA LKEAGV A RI+ F+ +Y Sbjct: 112 DRAKKQDAQEARGNVTAIMESLQDQAQRLGERNGVDGERAEK----QLEVAH-------QTKDILEAQARDSAVREKARDARTEHYRQQRLAAEADRAKKQDVQHEELLDFMSSTFRTPAEGVVIQWDSYEEYWECLPNIPDAATSLVTDALPTLTELVDLAKDKNFAATLKEAGVRTTPATRIANFIQKTIY 293
BLAST of mRNA_L-elsbetiae_contig9792.18746.1 vs. uniprot
Match: A0A6H5KFZ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFZ1_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 2.210e-21 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 1 Query: 889 LSTEYKTPEGGVVIPWDSYSEFWEALPNTPPATREIVEEQLPTLDVLISMAKDKDFAAELKEAGVPGLLAKRISKFVATAVY 1134 +S+ ++TP G VVI WDSY EFWE LPN P A + +V + LPTL L+ +AKDK+FAA LKEAGV + A RI+ F+ +Y Sbjct: 1 MSSTFRTPAGDVVIQWDSYEEFWECLPNIPDAAKSLVTDALPTLTELVDLAKDKNFAATLKEAGVQTIPATRIANFIQKTIY 82
BLAST of mRNA_L-elsbetiae_contig9792.18746.1 vs. uniprot
Match: A0A6H5JSG3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG3_9PHAE) HSP 1 Score: 101 bits (252), Expect = 6.160e-21 Identity = 73/222 (32.88%), Postives = 111/222 (50.00%), Query Frame = 1 Query: 472 MEAIITLDQASSNDGDGSDARSESTESAQK-KEDKVRTRDAHDKLQDLTGSLAEQAREMGRPREAAERAEKVAQEHLETSKGLVVLLKESNQLAAAQAVEDAEFRESQQASTALHRETQRQDRIARDKKTDAQHDQMAGILSTEYKTPEGGVVIPWDSYSEFWEALPNTPPATREIVEEQLPTLDVLISMAKDKDFAAELKEAGVPGLLAKRISKFVATAVY 1134 E+I+ L ++SSN+G G AR ++T+ AQ+ K +++ R AH Q+ G++ ++ LL++ Q + VED E+ E A + KK DAQ++ + +S+ ++TP GGVV+ W SY EFWE LPN P A + +V PTL L+ +AKDK+FAA LKEAG + A I+ F+ Y Sbjct: 83 FESILKLMESSSNNGSGDAARDDATDRAQQVKAERMAVRQAH---QEARGNVT----------------------------AIMELLQDQVQSLEERNVEDVEWSEKHLERLAAEADCA--------KKQDAQYEDLPDFMSSTFRTPAGGVVMQWYSYEEFWECLPNIPDAAKSLVTGAPPTLTELVDLAKDKNFAATLKEAGDGTIPATWIASFIQRTTY 265
BLAST of mRNA_L-elsbetiae_contig9792.18746.1 vs. uniprot
Match: A0A6H5JC73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC73_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 9.030e-21 Identity = 45/82 (54.88%), Postives = 57/82 (69.51%), Query Frame = 1 Query: 889 LSTEYKTPEGGVVIPWDSYSEFWEALPNTPPATREIVEEQLPTLDVLISMAKDKDFAAELKEAGVPGLLAKRISKFVATAVY 1134 +S+ ++TP GGVVI WDSY EFWE LPN P A + +V + LPTL L+ AKDK+FAA LKEAGV + A RI+ F +Y Sbjct: 1 MSSTFRTPAGGVVIQWDSYKEFWECLPNIPDAAKSLVTDALPTLTELVDFAKDKNFAATLKEAGVGTIPATRIANFTEKTIY 82 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9792.18746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig9792.18746.1 >prot_L-elsbetiae_contig9792.18746.1 ID=prot_L-elsbetiae_contig9792.18746.1|Name=mRNA_L-elsbetiae_contig9792.18746.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=341bp MNLVMKKMCLEAILKKFQITRAAGYKGAGGPFLWKTTNSDYATQQKPLYEback to top mRNA from alignment at L-elsbetiae_contig9792:3226..5600- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig9792.18746.1 ID=mRNA_L-elsbetiae_contig9792.18746.1|Name=mRNA_L-elsbetiae_contig9792.18746.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2375bp|location=Sequence derived from alignment at L-elsbetiae_contig9792:3226..5600- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig9792:3226..5600- >mRNA_L-elsbetiae_contig9792.18746.1 ID=mRNA_L-elsbetiae_contig9792.18746.1|Name=mRNA_L-elsbetiae_contig9792.18746.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2046bp|location=Sequence derived from alignment at L-elsbetiae_contig9792:3226..5600- (Laminarionema elsbetiae ELsaHSoW15)back to top |