prot_L-elsbetiae_contig9786.18742.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9786.18742.1
Unique Nameprot_L-elsbetiae_contig9786.18742.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length47
Homology
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BLAST of mRNA_L-elsbetiae_contig9786.18742.1 vs. uniprot
Match: D7FJ03_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ03_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 9.520e-15
Identity = 37/46 (80.43%), Postives = 39/46 (84.78%), Query Frame = 0 
Query:    1 FRSDVEVAFSSASLATIACNTLAVDAELQPDKIIRTLRVEGSSLRA 46
            +  D EV F SASLATIAC TLAVDAELQP+KIIRTLRVEGSSL A
Sbjct:    5 YHCDAEVTFPSASLATIACRTLAVDAELQPNKIIRTLRVEGSSLLA 50
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BLAST of mRNA_L-elsbetiae_contig9786.18742.1 vs. uniprot
Match: K3WQ75_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQ75_GLOUD)

HSP 1 Score: 48.1 bits (113), Expect = 5.320e-6
Identity = 25/44 (56.82%), Postives = 30/44 (68.18%), Query Frame = 0 
Query:    1 FRSDVEVAFSSASLATIACNTLAVDAELQPDKIIRTLRVEGSSL 44
            +  D+ +AF  A  A  A  TL VDAELQPDKI RTL VEG++L
Sbjct:    7 YECDISLAFPEAVDAAYALETLRVDAELQPDKITRTLAVEGTNL 50
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9786.18742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJ03_ECTSI9.520e-1580.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3WQ75_GLOUD5.320e-656.82Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015419CTAG/Pcc1 familyPFAMPF09341Pcc1coord: 4..45
e-value: 9.0E-11
score: 41.8
NoneNo IPR availableGENE3D3.30.310.50coord: 1..46
e-value: 1.4E-6
score: 30.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9786contigL-elsbetiae_contig9786:6564..6704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9786.18742.1mRNA_L-elsbetiae_contig9786.18742.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9786 6564..6704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9786.18742.1 ID=prot_L-elsbetiae_contig9786.18742.1|Name=mRNA_L-elsbetiae_contig9786.18742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=47bp
FRSDVEVAFSSASLATIACNTLAVDAELQPDKIIRTLRVEGSSLRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015419CTAG/Pcc1