mRNA_L-elsbetiae_contig978.18736.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig978.18736.1 vs. uniprot
Match: D7FJB4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJB4_ECTSI) HSP 1 Score: 410 bits (1055), Expect = 5.140e-138 Identity = 230/426 (53.99%), Postives = 284/426 (66.67%), Query Frame = 1 Query: 67 ARLHHSEDSTLLVVSWALRICFEELAAGGDDFAKAMVLPGDECDLHRPQARALPQSQGGGFRMGLIVQPYFWALALAMVDISCGRRERIDRRCADKGLITSLEINRVAEAMEMEASAFVELAAE---------SLDTTPGCSPS----LYGSCDLCEASPLKCHRFSSTPHRPELCICVHGASRHACVDPRTTWVEPSSLRSDPG-----AIQPAGPSSEPTLSTRRDISLAELLHHCTIFLSAVGNAGIRDLLGLKSTAGSIESSLPPPRRALLEALNKPHAPAPSVLATRPTPSSPSRESAVADEEVGMPRKRRAKRRKDTVVCNLTVGGRALCKHAVRGKEGWWGGSGGTEADKNDRAEKAALRVLAGATWVNLHVFGGGGEDGVFEVREESGYGARWSTDGAVFRGFLEPHMEDGHEKGWRH 1290 AR +E TLLV SWALR+ + A GD A+ ++ GD D+ RP+A A P+ R+GLIVQPY WALALAMVD++ RR+ I R ADKG I SLE VAEA+E EA +FVELAAE T GCS + L+G+C++CE + +KCHRFSSTP RPELC+C HG+S HAC+DPR T + +L PG A + + S R +++ +LL F+S++G AGIRDLLGLK T GSI+ LPP RR LL+A+NKPH ++ + + S S +A + + RA + T VC LTVGGRALCKHAVR +EGWWG GGTEA+KND AE+ LR+LAGATWVNLHVFGGGG+DGV E+REESGYGARWS DGAVFRGFLEPHM+DGHEKGWRH Sbjct: 3 ARPDLNEGVTLLV-SWALRLALQGPAHQGDAVAQQLLCVGDALDVLRPEAAARPRDAP---RVGLIVQPYVWALALAMVDLANRRRKGIHRCFADKGSIASLETGHVAEAIEHEAYSFVELAAELFAAGLTGAGTRTGFGCSAAPLAPLFGACEMCETTVVKCHRFSSTPCRPELCVCTHGSSHHACIDPRATPISLPALTERPGENVVGARATCDSRTTQSASARWNLAAVDLLRRGEKFISSIGQAGIRDLLGLKRTVGSIDGCLPPSRRVLLKAINKPHL----LVVSEGCAGTRSSGSCLAADGSQKRSEGRAILPRATTVCILTVGGRALCKHAVRAREGWWGECGGTEAEKNDHAEEVTLRLLAGATWVNLHVFGGGGKDGVLEIREESGYGARWSADGAVFRGFLEPHMKDGHEKGWRH 420
BLAST of mRNA_L-elsbetiae_contig978.18736.1 vs. uniprot
Match: D8SWM3_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SWM3_SELML) HSP 1 Score: 125 bits (314), Expect = 4.320e-30 Identity = 77/188 (40.96%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 727 TIFLSAVGNAGIRDLLGLKSTAGSIESSLPPPRRALLEALNKPHAPAPSVLATRPTPSSPSRESAVADEEVGMPRKRRAKRRKDTVVCNLTVGGRALCKHAVRGKEGWWGGSGGTEADKNDRAEKAALRVLAGATWVNLHVFGGGGEDGVFEVREESGYGARWSTDGAVFRGFLEPHMEDGHEKGWRH 1290 T L ++ G+ LLGL++T G++ S+LPPPR LL S LA R + S PS LTVGGRAL KH R GWWG GTE KN A KA R++ A+W+N H +FE+R + GYGARWS+DG FRGF+EP M+DGH WRH Sbjct: 67 TALLQSLKVEGVASLLGLRATKGTLVSALPPPRSRLLA----------SFLA-RNSESVPS--------------------------SKLTVGGRALAKHVNRSSAGWWGACSGTETAKNKVALKAVCRIIDQASWMNTHHLPQSTH--IFEIRVQDGYGARWSSDGKQFRGFVEPPMKDGHSSKWRH 215
BLAST of mRNA_L-elsbetiae_contig978.18736.1 vs. uniprot
Match: D8SW28_SELML (Uncharacterized protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SW28_SELML) HSP 1 Score: 126 bits (317), Expect = 5.810e-30 Identity = 77/188 (40.96%), Postives = 97/188 (51.60%), Query Frame = 1 Query: 727 TIFLSAVGNAGIRDLLGLKSTAGSIESSLPPPRRALLEALNKPHAPAPSVLATRPTPSSPSRESAVADEEVGMPRKRRAKRRKDTVVCNLTVGGRALCKHAVRGKEGWWGGSGGTEADKNDRAEKAALRVLAGATWVNLHVFGGGGEDGVFEVREESGYGARWSTDGAVFRGFLEPHMEDGHEKGWRH 1290 T L ++ G+ LLGL++T G++ S+LPPPR LL S LA R + S PS LTVGGRAL KH R GWWG GTE KN A KA R++ A+W+N+H +FE+R + GYGARWS+DG FRGF+EP M+DGH WRH Sbjct: 118 TALLQSLKVEGVASLLGLRATKGTLVSALPPPRSRLLA----------SFLA-RNSESVPS--------------------------SKLTVGGRALAKHVNRSSAGWWGACSGTETAKNKIALKAVCRIIDQASWMNIHHLPQSTH--IFEIRVQDGYGARWSSDGKQFRGFVEPPMKDGHSSKWRH 266
BLAST of mRNA_L-elsbetiae_contig978.18736.1 vs. uniprot
Match: A0A7S0TZ44_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TZ44_HEMAN) HSP 1 Score: 119 bits (299), Expect = 5.630e-29 Identity = 59/99 (59.60%), Postives = 62/99 (62.63%), Query Frame = 1 Query: 994 LTVGGRALCKHAVRGKEGWWGGSGGTEADKNDRAEKAALRVLAGATWVNLHVFGGGGEDGVFEVREESGYGARWSTDGAVFRGFLEPHMEDGHEKGWRH 1290 LTVG RAL KHAVR + WWG G EA KN A LR+ GA W N H+ GG VFEVR GYGARW DG FRGFLEP ME GHEKGW H Sbjct: 34 LTVGARALAKHAVRSSDKWWGDPRGPEAAKNAEALSVLLRIFEGAEWSNTHLLPGG--LAVFEVRHGDGYGARWGADGMTFRGFLEPQMEGGHEKGWLH 130
BLAST of mRNA_L-elsbetiae_contig978.18736.1 vs. uniprot
Match: A9T753_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T753_PHYPA) HSP 1 Score: 122 bits (307), Expect = 1.760e-28 Identity = 68/185 (36.76%), Postives = 94/185 (50.81%), Query Frame = 1 Query: 736 LSAVGNAGIRDLLGLKSTAGSIESSLPPPRRALLEALNKPHAPAPSVLATRPTPSSPSRESAVADEEVGMPRKRRAKRRKDTVVCNLTVGGRALCKHAVRGKEGWWGGSGGTEADKNDRAEKAALRVLAGATWVNLHVFGGGGEDGVFEVREESGYGARWSTDGAVFRGFLEPHMEDGHEKGWRH 1290 L+ +G G+R LLG+++T G+++ +LPPP+ L ++ + A + D C ++VG RAL KHA R +GWWG GTEA KN AE R++ A W+N+H+ V E+R GYGARW DG+ FRGFLEP ME+GH WRH Sbjct: 129 LNTLGIDGVRVLLGMRTTNGTLKEALPPPKSLLADSFS-------------------------------------ALQNPDIAGCRISVGARALAKHAPRSLDGWWGSISGTEAAKNKLAETTMHRLMKHAVWINIHL----APIPVLEIRVADGYGARWLADGSKFRGFLEPPMEEGHMVNWRH 272
BLAST of mRNA_L-elsbetiae_contig978.18736.1 vs. uniprot
Match: A0A1D1Z4C7_9ARAE (Homeobox protein SIX5 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Z4C7_9ARAE) HSP 1 Score: 120 bits (301), Expect = 2.280e-28 Identity = 71/185 (38.38%), Postives = 91/185 (49.19%), Query Frame = 1 Query: 736 LSAVGNAGIRDLLGLKSTAGSIESSLPPPRRALLEALNKPHAPAPSVLATRPTPSSPSRESAVADEEVGMPRKRRAKRRKDTVVCNLTVGGRALCKHAVRGKEGWWGGSGGTEADKNDRAEKAALRVLAGATWVNLHVFGGGGEDGVFEVREESGYGARWSTDGAVFRGFLEPHMEDGHEKGWRH 1290 LS + G+ LLG+ T G+I +LPPPR ALL + P+ P D L+ G RAL KH R GWWG G++A+KN+ A + R+L W+N+H + VFE+R GYGARWS DG+ F GFLEPHME+GH KGWRH Sbjct: 58 LSGLSYDGVGSLLGIMHTVGTIPDALPPPRSALLSSFMLPYRP-------------------------------------DVEGSFLSNGARALAKHVSRSSNGWWGSFVGSDANKNELALEVINRLLTCCCWMNIHSIQP--YEHVFEIRIGEGYGARWSRDGSKFIGFLEPHMEEGHAKGWRH 203
BLAST of mRNA_L-elsbetiae_contig978.18736.1 vs. uniprot
Match: A0A7S1C8E3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8E3_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.330e-28 Identity = 74/191 (38.74%), Postives = 95/191 (49.74%), Query Frame = 1 Query: 730 IFLSAVGNAGIRDLLGLKSTAGSIESSLPPPRRALL----EALNKPHAPAPSVLATRPTPSSPSRESAVADEEVGMPRKRRAKRRKDTVVCNLTVGGRALCKHAVRGKEGWWGGSGGTEADKNDRAEKAALRVLAGATWVNLHVFGGGGEDGVFEVREESGYGARWSTDGAVFRGFLEPHMEDGHEKGWRH 1290 + +A G + LLG++ T S+ +L PP RA+L EAL+ HA P+ +P+ LTVG RAL KH R GWWG + G+EA KN + RVL GATW+N+H+ + EVR GYGARW+ DGA FRGFLEPH DGH GW+H Sbjct: 3 VLRAAGGVRAVMHLLGMRRTFKSV--TLLPPSRAVLCASFEALHSQHA-VPATSRAKPS--------------------------------QLTVGARALAKHCHRASSGWWGAAAGSEAAKNAWGREVLARVLDGATWLNVHLLPHAAA--IVEVRTADGYGARWTADGAAFRGFLEPHAADGHATGWKH 156
BLAST of mRNA_L-elsbetiae_contig978.18736.1 vs. uniprot
Match: A0A3M6V321_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6V321_POCDA) HSP 1 Score: 122 bits (305), Expect = 3.020e-28 Identity = 71/185 (38.38%), Postives = 91/185 (49.19%), Query Frame = 1 Query: 736 LSAVGNAGIRDLLGLKSTAGSIESSLPPPRRALLEALNKPHAPAPSVLATRPTPSSPSRESAVADEEVGMPRKRRAKRRKDTVVCNLTVGGRALCKHAVRGKEGWWGGSGGTEADKNDRAEKAALRVLAGATWVNLHVFGGGGEDGVFEVREESGYGARWSTDGAVFRGFLEPHMEDGHEKGWRH 1290 + +G G+ DLL ++ T GS++ PPP + L+E+ N+ H P NLTVG RAL KH R WWG G+E KN+ A +R+L A+W+N+H+ E V EVR GYGARWS DG VFRGFLEP MEDGH GW+H Sbjct: 126 IKILGVRGLLDLLNIRHTQGSVDI-FPPPVKVLIESFNEKHKPN----------------------------------------ANLTVGARALSKHCHRDSSEWWGACAGSEQVKNEHAITVVMRILEDASWINIHLLPH--ELKVIEVRCTEGYGARWSHDGKVFRGFLEPQMEDGHAAGWKH 267
BLAST of mRNA_L-elsbetiae_contig978.18736.1 vs. uniprot
Match: UPI00053FCDFC (uncharacterized protein LOC104888857 isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FCDFC) HSP 1 Score: 125 bits (313), Expect = 3.190e-28 Identity = 72/185 (38.92%), Postives = 92/185 (49.73%), Query Frame = 1 Query: 736 LSAVGNAGIRDLLGLKSTAGSIESSLPPPRRALLEALNKPHAPAPSVLATRPTPSSPSRESAVADEEVGMPRKRRAKRRKDTVVCNLTVGGRALCKHAVRGKEGWWGGSGGTEADKNDRAEKAALRVLAGATWVNLHVFGGGGEDGVFEVREESGYGARWSTDGAVFRGFLEPHMEDGHEKGWRH 1290 +S +G GI+ LLGLK T G+I +LPPPR ALL + +PH + + C LT G RAL KH R +WG GG + +KN A + +R++ W+N+H G VFE+R GYGARWS DG F GFLEP+MEDGH K WRH Sbjct: 260 ISGLGYRGIQKLLGLKQTVGTIAEALPPPRSALLSSFAQPH-------------------------------------KSNIKGCTLTEGARALTKHVSRCSSNYWGKVGGNDFNKNHLAMEVIIRIIGHCRWLNVHFVQPHGP--VFEIRISEGYGARWSEDGTKFIGFLEPYMEDGHLKQWRH 405
BLAST of mRNA_L-elsbetiae_contig978.18736.1 vs. uniprot
Match: A0A7S4KMN1_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KMN1_GUITH) HSP 1 Score: 123 bits (309), Expect = 3.210e-28 Identity = 72/185 (38.92%), Postives = 93/185 (50.27%), Query Frame = 1 Query: 736 LSAVGNAGIRDLLGLKSTAGSIESSLPPPRRALLEALNKPHAPAPSVLATRPTPSSPSRESAVADEEVGMPRKRRAKRRKDTVVCNLTVGGRALCKHAVRGKEGWWGGSGGTEADKNDRAEKAALRVLAGATWVNLHVFGGGGEDGVFEVREESGYGARWSTDGAVFRGFLEPHMEDGHEKGWRH 1290 ++ +G+ G+ LG+ T GS+ + PP L+ + NKPH KD LTVG +AL KHAVR +GWWG G +A KN +AE+ ++L A W N H+ E +FE+R G+GARWS DG FRGFLEP MEDGHEKGWRH Sbjct: 187 MNRLGDDGVLSALGMSKTIGSVMKT-PPYVGDLIHSFNKPH-------------------------------------EKDGRKMTLTVGAKALAKHAVRSSDGWWGQIIGNDASKNRQAEQKLEQILKDAVWANTHLLPNDIE--IFELRVREGFGARWSADGKEFRGFLEPLMEDGHEKGWRH 331 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig978.18736.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig978.18736.1 >prot_L-elsbetiae_contig978.18736.1 ID=prot_L-elsbetiae_contig978.18736.1|Name=mRNA_L-elsbetiae_contig978.18736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=431bp LCPLSVRPGAVLPRISRSHMVPARLHHSEDSTLLVVSWALRICFEELAAGback to top mRNA from alignment at L-elsbetiae_contig978:23549..25365- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig978.18736.1 ID=mRNA_L-elsbetiae_contig978.18736.1|Name=mRNA_L-elsbetiae_contig978.18736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1817bp|location=Sequence derived from alignment at L-elsbetiae_contig978:23549..25365- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig978:23549..25365- >mRNA_L-elsbetiae_contig978.18736.1 ID=mRNA_L-elsbetiae_contig978.18736.1|Name=mRNA_L-elsbetiae_contig978.18736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2586bp|location=Sequence derived from alignment at L-elsbetiae_contig978:23549..25365- (Laminarionema elsbetiae ELsaHSoW15)back to top |