prot_L-elsbetiae_contig9765.18721.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9765.18721.1
Unique Nameprot_L-elsbetiae_contig9765.18721.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length92
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig9765.18721.1 vs. uniprot
Match: A0A6H5JVF1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVF1_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 8.710e-14
Identity = 45/81 (55.56%), Postives = 54/81 (66.67%), Query Frame = 0 
Query:    1 EATLTDARLNFESFARVKAQIEALAPSLAGFGEGTGWLVFSLQFCNERGSLVSLLPSAYDPSEFCEPRLPRGQKVYLRATV 81
            E TL   RL+F SFA +KAQIE L PSLAGF EG  W + S+QFC++   LV LLPS +DP +F   +     KVYLRATV
Sbjct:   38 EVTLAP-RLSFASFAGLKAQIEDLVPSLAGFEEGR-WCLLSVQFCDDDFDLVELLPSTFDPRDFEHVQ----HKVYLRATV 112
[Close]
BLAST of mRNA_L-elsbetiae_contig9765.18721.1 vs. uniprot
Match: D7FRP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP3_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 5.130e-12
Identity = 43/81 (53.09%), Postives = 52/81 (64.20%), Query Frame = 0 
Query:    1 EATLTDARLNFESFARVKAQIEALAPSLAGFGEGTGWLVFSLQFCNERGSLVSLLPSAYDPSEFCEPRLPRGQKVYLRATV 81
            E TL   RL+F SFA +KAQIE L  SLAGF EG  W + S+QFC++   LV LLPS +DP +F   +     KVYLR TV
Sbjct:   38 EVTLAP-RLSFASFAGLKAQIEDLVRSLAGFEEGR-WCLLSVQFCDDDFDLVELLPSTFDPRDFENVQ----DKVYLRVTV 112
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9765.18721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVF1_9PHAE8.710e-1455.56Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FRP3_ECTSI5.130e-1253.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9765contigL-elsbetiae_contig9765:2389..2664 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9765.18721.1mRNA_L-elsbetiae_contig9765.18721.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9765 2389..2666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9765.18721.1 ID=prot_L-elsbetiae_contig9765.18721.1|Name=mRNA_L-elsbetiae_contig9765.18721.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
EATLTDARLNFESFARVKAQIEALAPSLAGFGEGTGWLVFSLQFCNERGS
LVSLLPSAYDPSEFCEPRLPRGQKVYLRATVAPSPRVHGIET
back to top