prot_L-elsbetiae_contig9724.18699.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9724.18699.1
Unique Nameprot_L-elsbetiae_contig9724.18699.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length571
Homology
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BLAST of mRNA_L-elsbetiae_contig9724.18699.1 vs. uniprot
Match: A0A6H5KYN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYN5_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 2.160e-50
Identity = 210/409 (51.34%), Postives = 232/409 (56.72%), Query Frame = 0 
Query:    1 MPDFLPADILYLVYCSGYAH---ARKLRTVCLSVSNACREQSPWSLVAAPGLPLRLLSWHLRGGDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCRSSDCDCDWVGHDA-----------------------------GNAIAGGGGLRSGPKSADAAAVXXXXXXXXXXXXXXXXXXXETQATPPPVSRLSPRRLIQRVVVDRGVSLEGVVWPARLTSLEMGEEGVGVSEVTDSGAALAAFSAATAARFGRAMKIGGAG------------TAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATEAFWAGRAGGTCFDRPIREVSLPPTLVHLELLGPFDDPLEGVAWPPSLETLVFGELFNRSLSRGDGVQLPRXXXXXXXXXAFNQCLDDVA 365
            MP  L  DIL +V+CSGYA    A  L TVCL+V NACREQ+PW+L AAPG+P  LLSWHLRGGDRLL         XXXXXXXXXXX                      D  WVGH A                              N + G  G+ +     +    XXXXXXXXXXXXXXXXXXX   A     SRLSPR  IQRVVVD  +SL+GVVWPARLT+LEMGEE                  A       +  + G                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AT  FWAG+  G+CFD P+REVSLPPTL+HLELLGPF+D LEGVAWPPSLETLV G+LFN SL  GDGV LPR         AF+  LD VA
Sbjct:    1 MPGILAGDILAIVWCSGYAGPAAATPLETVCLAVCNACREQTPWTLRAAPGMPPSLLSWHLRGGDRLLLQRFDQRGRXXXXXXXXXXXH---------------------DRGWVGHAAKPAVTTAXXXXXXXXXXXXXXXXXXXXXXXNTVDGKAGVVAVRTGVEEXXXXXXXXXXXXXXXXXXXXXXXAGA-----SRLSPRANIQRVVVDLSLSLDGVVWPARLTALEMGEEXXXXXXXXXXXXXXXXSVAHPGNLENKPSRRGHCSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATARFWAGKPPGSCFDTPLREVSLPPTLLHLELLGPFNDSLEGVAWPPSLETLVLGDLFNGSL--GDGVVLPRGLKSLTLGSAFDMSLDAVA 381
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BLAST of mRNA_L-elsbetiae_contig9724.18699.1 vs. uniprot
Match: D7FNE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE9_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 5.790e-50
Identity = 237/485 (48.87%), Postives = 263/485 (54.23%), Query Frame = 0 
Query:    1 MPDFLPADILYLVYCSGYAH----ARKLRTVCLSVSNACREQSPWSLVAAPGLPLRLLSWHLRGGDRLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGCRSSDCDCDWVGHDA----------------------GNAIAGGGGLRSGPKSA-----DAAAVXXXXXXXXXXXXXXXXXXXETQATPPPVSRLSPRRLIQRVVVDRGVSLEGVVWPARLTSLEMGEEGVGVSEVTDSGAALAAFSAATAARFGRAMKIGGAGTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSATEAFWAGRAGGTCFDRPIREVSLPPTLVHLELLGPFDDPLEGVAWPPSLETLVFGELFNRSLSRGDGVQLPRXXXXXXXXXAFNQCLDDVAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGMLLSQSADSPVDSPPLVGVAXXXXXXELKFGGYYNCSLEDTEL 454
            MP  L +DIL +V+ SGYA     A  L TVCL+V NACREQ+PW+L AAPG+P  LLSWHLRGGDRLL        XXXXXXXXXXXXX                     D  WVGH A                       N  AG   +R+G +            XXXXXXXXXXXXXXXXXXX         SRLSPR  IQRVVV  G+SL+GVVWPARLT+LEMGEE                                       XXXXXXXXXXXXXXXX              +AT  FWAG+  G+CFD P+REVSLPPTL+HLELLGPF+DPLEG+AWPPSLETLV G+LFN +L  GDGV LPR XXXXXXXX             XXXXXXXXXXXXXXXXXXXXX                     G L  +     V +P   GV       +LKFGGYYNCSL+  EL
Sbjct:    1 MPGILASDILAIVWVSGYAGPAAAAASLETVCLAVCNACREQTPWALRAAPGMPPWLLSWHLRGGDRLLLQRSAQRGXXXXXXXXXXXXX---------------------DRGWVGHTALPAVTTAATREXXXXXXXXXXXXNGKAGVIVVRAGVEEDRDGLDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLSPRANIQRVVVGLGLSLDGVVWPARLTALEMGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITASEPATIGAATAAATARFWAGKPPGSCFDTPLREVSLPPTLLHLELLGPFNDPLEGIAWPPSLETLVLGDLFNGTL--GDGVVLPRGXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXPLAFHHKRDLFRRPVPQAYNGGSLAGRPQAPYVRAPLSAGVTFPTGLEDLKFGGYYNCSLDSAEL 459
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9724.18699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYN5_9PHAE2.160e-5051.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNE9_ECTSI5.790e-5048.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 445..487
e-value: 3.1E-5
score: 24.1
coord: 489..529
e-value: 6.8E-7
score: 29.4
coord: 357..399
e-value: 4.4E-5
score: 23.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 414..569
e-value: 9.4E-7
score: 29.5
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 292..493
coord: 288..405
coord: 433..568
NoneNo IPR availablePANTHERPTHR32134:SF114INACTIVE SERINE/THREONINE-PROTEIN KINASE FNKC-RELATEDcoord: 292..493
coord: 288..405
coord: 433..568
NoneNo IPR availableSUPERFAMILY81995beta-sandwich domain of Sec23/24coord: 243..271
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 297..557

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9724contigL-elsbetiae_contig9724:3304..7320 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9724.18699.1mRNA_L-elsbetiae_contig9724.18699.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9724 2749..7320 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9724.18699.1 ID=prot_L-elsbetiae_contig9724.18699.1|Name=mRNA_L-elsbetiae_contig9724.18699.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=571bp
MPDFLPADILYLVYCSGYAHARKLRTVCLSVSNACREQSPWSLVAAPGLP
LRLLSWHLRGGDRLLLQQQQQQQQQQQPRATAPPERAEDAGGSDGGGCCS
GCRSSDCDCDWVGHDAGNAIAGGGGLRSGPKSADAAAVAAAAATAATAAT
AAAAAAAETQATPPPVSRLSPRRLIQRVVVDRGVSLEGVVWPARLTSLEM
GEEGVGVSEVTDSGAALAAFSAATAARFGRAMKIGGAGTAATTPGQQQQQ
QQQQQQQQQQQQQQQTAAAAAASATEAFWAGRAGGTCFDRPIREVSLPPT
LVHLELLGPFDDPLEGVAWPPSLETLVFGELFNRSLSRGDGVQLPRGLKS
LTLGSAFNQCLDDVAWPPGLTHLQLGHSFNQDIGGVRWPSTLSEIYFGDL
FRSPITEVRKGMLLSQSADSPVDSPPLVGVAWPRGLEELKFGGYYNCSLE
DTELPEGLRSIDLGRSFNRAIADTVFPEGLRRITLGDSFNQPVEGVRWPS
ALRVLHFGSNFNQEIERTDFPQKLERLTFRQRFDRNIENVKWPKSLKVLE
FGNCFDKPIERVQWPPNLEM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf