prot_L-elsbetiae_contig9723.18694.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9723.18694.1
Unique Nameprot_L-elsbetiae_contig9723.18694.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length49
Homology
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Match: A0A813I3N5_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I3N5_POLGL)

HSP 1 Score: 50.4 bits (119), Expect = 7.160e-6
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 0
Query:    5 AFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASGVS 48
            AFL ++G T+V L GC+P GVL FLPSY  +  AV  W+    S
Sbjct:  379 AFLEDLGDTLVTLLGCMPGGVLCFLPSYAAIDAAVAAWKRQEAS 422          
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Match: A0A813DPK9_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DPK9_POLGL)

HSP 1 Score: 50.4 bits (119), Expect = 7.180e-6
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 0
Query:    5 AFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASGVS 48
            AFL ++G T+V L GC+P GVL FLPSY  +  AV  W+    S
Sbjct:  730 AFLEDLGDTLVTLLGCMPGGVLCFLPSYAAIDAAVAAWKRQEAS 773          
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Match: A0A813DB55_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DB55_POLGL)

HSP 1 Score: 50.4 bits (119), Expect = 7.180e-6
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 0
Query:    5 AFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASGVS 48
            AFL ++G T+V L GC+P GVL FLPSY  +  AV  W+    S
Sbjct: 1043 AFLEDLGDTLVTLLGCMPGGVLCFLPSYAAIDAAVAAWKRQEAS 1086          
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Match: A0A1Y2G4S4_9BASI (ATP-dependent DNA helicase CHL1 n=1 Tax=Leucosporidium creatinivorum TaxID=106004 RepID=A0A1Y2G4S4_9BASI)

HSP 1 Score: 48.1 bits (113), Expect = 4.710e-5
Identity = 18/46 (39.13%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    2 RDDAFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASGV 47
            +D+  L+E+G ++V +A  +P+G++VF+PSY  L +    W ASG+
Sbjct:  674 KDEKLLDELGQSIVNIAQVVPKGIVVFVPSYDFLNQVQARWEASGM 719          
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Match: A0A316UHP8_9BASI (ATP-dependent DNA helicase CHL1 n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316UHP8_9BASI)

HSP 1 Score: 48.1 bits (113), Expect = 4.710e-5
Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 0
Query:    3 DDAFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASG 46
            D A L+++G  +   A  IP GV+VFLPSY++L E V  W+ +G
Sbjct:  698 DTALLDDLGNAIANFAALIPHGVVVFLPSYKLLDELVARWKETG 741          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9723.18694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A813I3N5_POLGL7.160e-650.00Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A813DPK9_POLGL7.180e-650.00Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A813DB55_POLGL7.180e-650.00Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A1Y2G4S4_9BASI4.710e-539.13ATP-dependent DNA helicase CHL1 n=1 Tax=Leucospori... [more]
A0A316UHP8_9BASI4.710e-545.45ATP-dependent DNA helicase CHL1 n=1 Tax=Pseudomicr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 5.0
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9723contigL-elsbetiae_contig9723:166..312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9723.18694.1mRNA_L-elsbetiae_contig9723.18694.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9723 148..312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9723.18694.1 ID=prot_L-elsbetiae_contig9723.18694.1|Name=mRNA_L-elsbetiae_contig9723.18694.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=49bp
MRDDAFLNEIGCTVVALAGCIPRGVLVFLPSYRILGEAVRVWRASGVS*
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