prot_L-elsbetiae_contig9720.18692.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9720.18692.1
Unique Nameprot_L-elsbetiae_contig9720.18692.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length87
Homology
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BLAST of mRNA_L-elsbetiae_contig9720.18692.1 vs. uniprot
Match: A0A2S1PRV6_FUCSE (Putative dicer (Fragment) n=1 Tax=Fucus serratus TaxID=87148 RepID=A0A2S1PRV6_FUCSE)

HSP 1 Score: 104 bits (259), Expect = 3.840e-24
Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 0 
Query:    2 NNHKIGPGQPVLLVEQYCQPVCCTRRVFVSVLHIVPRMFDLERQLLCFVLHESLFLPALQASLYHRQP 69
            N H +   + VLL+EQY Q VC TR+VFVSV+HIVPRMFDLERQLLCFVLHE++FLPALQASL+HR P
Sbjct:  795 NKHGVQTTRAVLLLEQYTQVVCMTRQVFVSVMHIVPRMFDLERQLLCFVLHEAVFLPALQASLWHRCP 862
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BLAST of mRNA_L-elsbetiae_contig9720.18692.1 vs. uniprot
Match: A0A6H5KQM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM7_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 1.560e-14
Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 0 
Query:    1 LNNHKIGPGQPVLLVEQYCQPVCCTRRVFVSVLH 34
            LNNHK+GPGQPVLLVEQYCQPVCCTRRVF+SVLH
Sbjct: 1556 LNNHKVGPGQPVLLVEQYCQPVCCTRRVFISVLH 1589
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BLAST of mRNA_L-elsbetiae_contig9720.18692.1 vs. uniprot
Match: D7FZW2_ECTSI (Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW2_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 3.090e-12
Identity = 33/35 (94.29%), Postives = 33/35 (94.29%), Query Frame = 0 
Query:   35 IVPRMFDLERQLLCFVLHESLFLPALQASLYHRQP 69
            IVPRMFDLERQLLCFVLHESLFLPALQ SLYHR P
Sbjct: 1115 IVPRMFDLERQLLCFVLHESLFLPALQTSLYHRNP 1149
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9720.18692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2S1PRV6_FUCSE3.840e-2473.53Putative dicer (Fragment) n=1 Tax=Fucus serratus T... [more]
A0A6H5KQM7_9PHAE1.560e-1494.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZW2_ECTSI3.090e-1294.29Dicer-like 3 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9720contigL-elsbetiae_contig9720:860..2875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9720.18692.1mRNA_L-elsbetiae_contig9720.18692.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9720 860..2876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9720.18692.1 ID=prot_L-elsbetiae_contig9720.18692.1|Name=mRNA_L-elsbetiae_contig9720.18692.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp
LNNHKIGPGQPVLLVEQYCQPVCCTRRVFVSVLHIVPRMFDLERQLLCFV
LHESLFLPALQASLYHRQPSPHGAPNNTNTNTTTNSS
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