prot_L-elsbetiae_contig972.18691.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig972.18691.1
Unique Nameprot_L-elsbetiae_contig972.18691.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length646
Homology
BLAST of mRNA_L-elsbetiae_contig972.18691.1 vs. uniprot
Match: D8LDR3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR3_ECTSI)

HSP 1 Score: 659 bits (1701), Expect = 4.470e-230
Identity = 373/626 (59.58%), Postives = 432/626 (69.01%), Query Frame = 0
Query:   12 SRASVIALALAAVASTC-RGEQVLVASLIDDITYSDIVANGDCHNGCKREEHAVAHLEGTPATPSCELQTISPFDTATPPPGLLRASIYCEDSTGALVEQGVRPCIYEVCVDFKWTAGINGEEGQLTYDV----VIDRAAKPNAPHTVYVDLSVGVDPSTTNSNVDSCVAVGECVGLQCGQEYTAEITMTDEFGDGWIGGAEGFANLWELWTVKPEGGSLVTRGTLADNHESGTTFTCLEDGTYFFNTTANAAFADDMGWGICEKHGLAGEGLEFTVTNGVCDEESALKIERKTAEETSDAEASYCTLPAQGED--FRTSTCTSLSSGMKIEGVGLFYDDRCNHADLSGCGARSIDACRLCFRNREEWLIAYPFDRIPDWELCPCCVAETFGESCETGGGGXXXPDEGVIIGVSVGIAGVLAIACCLSCAFGTTIVRFLRRMKKQKHAEDQLDLDVHGTGISAFPESPSNG----GGTMRGXXXXXTQGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNATGGGSGGQ--VQAGVNVGGGGARGDLEKITAERAEGVSTTAQSTPSGLH-------------GNVAPRSTVLDERLVAQGYATGDVGRPLSG----TATAARGGGS 607
            S+A  IA+ALAA A+   R EQVLVASL+DDITY+DIV +G C +GC R E AVAH+ GTP    C LQT+SPFD++TP PGLLRA IYCEDS+G L+EQG RPC+++VCVDF W++G      +LTY+      +    +PNA                                      Y A I+MTDE+GDGW+GG +G+ N W+L  +  +  ++ ++GTLADNHES T   CL DG Y FNTTA +AFADDMGWGIC+ +G AGEGL+FTV NG CD ESA  I R TAEETSDA  SYC LPA   D  +RTSTCT+LSSGMKI+GVGLFYDDRCN AD SGC ARSI ACRLCF +++ WL  +P  R+PDWELCPCCVA+T G  C +GGGG    DEGVIIGVSVGIAGV+AIACCLSCAFG TIVRFLRRM+K+KHAEDQLDLD H  G SAFPESP  G    G T+RG     T GNRDRGRSGHFPIPRFDSIRGRFDSGIFASN  GG       V A  +VGGGG  G+LEKI+AE+A  VSTTAQSTPSG +             GN APRSTVLD RLVAQGY T D+ RP S      ATAA GGG+
Sbjct:    3 SKAFGIAVALAATAAPRGRAEQVLVASLVDDITYTDIVPSGTCADGCVRYEQAVAHVTGTPDQLDCGLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXXELTYEFNGTCEVQTCEEPNA--------------------------------------YGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTD--TVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESAELIARATAEETSDAGDSYCVLPAPESDVDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWLSRFPSSRVPDWELCPCCVADTLGIDCASGGGGGT--DEGVIIGVSVGIAGVIAIACCLSCAFGPTIVRFLRRMRKKKHAEDQLDLDGH-PGTSAFPESPGGGMGGSGNTLRGAVL--THGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVGGGXXXXXXGVGARAHVGGGGPSGELEKISAEQAN-VSTTAQSTPSGANXXXXXXXXXXXKAGN-APRSTVLDGRLVAQGYTTTDMERPTSSGPSRAATAAGGGGN 581          
BLAST of mRNA_L-elsbetiae_contig972.18691.1 vs. uniprot
Match: A0A6H5L5M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M6_9PHAE)

HSP 1 Score: 580 bits (1496), Expect = 3.700e-199
Identity = 287/463 (61.99%), Postives = 354/463 (76.46%), Query Frame = 0
Query:   17 IALALAAVAST-CRGEQVLVASLIDDITYSDIVANGDCHNGCKREEHAVAHLEGTPATPSCELQTISPFDTATPPPGLLRASIYCEDSTGALVEQGVRPCIYEVCVDFKWTAGINGEEGQLTYDVVIDRAAKPNAPHTVYVDLSVGVDPSTTNSNVDSCVAVGECVGLQCG--QEYTAEITMTDEFGDGWIGGAEGFANLWELWTVKPEGGSLVTRGTLADNHESGTTFTCLEDGTYFFNTTANAAFADDMGWGICEKHGLAGEGLEFTVTNGVCDEESALKIERKTAEETSDAEASYCTLPA--QGEDFRTSTCTSLSSGMKIEGVGLFYDDRCNHADLSGCGARSIDACRLCFRNREEWLIAYPFDRIPDWELCPCCVAETFGESCETGGGGXXXPDEGVIIGVSVGIAGVLAIACCLSCAFGTTIVRFLRRMKKQKHAEDQLDLDVHGT-GISAFPESPS 473
            IA+ALAA+A+   R EQ+LVASL+DDITY+DIV +G C +GC R E AVAH+ GTP    C+LQT+SPFD++TP PGLLRA IYCEDS+G L+EQG RPC+++VCVDF W++G      +LTY+V ++R +KP+APHT+YVDLSV +DP++TN+N DSC   G C    C     Y A I+MTDE+GDGW+GG +G+ N W+L  +  +  ++ ++GTLADNHES T   CL DG Y FNTTA +AFADDMGWGIC+ +G AGEGL+FTV NG CD ESA  I R TAEETSDA  SYC LPA    ED+RTSTCT+LSSGMKI+GVGLFYDDRCN AD SGC ARSI ACRLCF +++ W+  +P  R+PDWELCPCCVA+T G  C +GGGG    D+GVIIG+SVGIAGV+AIACCLSCAFG TIVRF RR + ++   D+ DLD+ G  G SAFPESP+
Sbjct:  116 IAVALAAIAAPRARAEQILVASLVDDITYADIVPSGTCADGCVRYEQAVAHVTGTPDQLDCDLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXXELTYEVRVERDSKPSAPHTIYVDLSVAIDPTSTNTNADSCQYNGTCEVQTCEAPNAYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTD--TVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESAELIARATAEETSDAGDSYCVLPAPESDEDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASGGGGGT--DDGVIIGISVGIAGVIAIACCLSCAFGPTIVRFFRRFQNKRL--DEEDLDMAGVLGTSAFPESPT 572          
BLAST of mRNA_L-elsbetiae_contig972.18691.1 vs. uniprot
Match: A0A6H5L443_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L443_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 1.210e-65
Identity = 140/225 (62.22%), Postives = 156/225 (69.33%), Query Frame = 0
Query:  446 MKKQKHAEDQLDLDVHGTGISAFPESPSNGGGTMRGXXXXXTQGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNATGGGSGGQVQAGVNVGGGGARGDLEKITAERAEGVSTTAQSTPSGLHGNV------------APRSTVLDERLVAQGYATGDVGRPLSGTATAA---------------RGGGSGGQDQTGWGLAMSGEYPDLEGTDPYAVDNAMAETGT 643
            M+K+KHAEDQLDLD H  G SAFP+SP  GG T+RG     T GNRDRGRSGHFPIPRFDSIRGRFDSGIFASN  GG     V AG +VGGGG  G+LEKI+AE+A  VSTTAQSTPSG +G+             APRSTVLD RLVA+GY T D+GRP S +A+ A               RG G       GWGLAMSGEYPDLEGTDPYA++NAMAETGT
Sbjct:    1 MRKKKHAEDQLDLDGH-PGTSAFPDSPG-GGNTLRGAVL--THGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVAGGXXXXXV-AGAHVGGGGPSGELEKISAEQAN-VSTTAQSTPSGANGSGVGTGGGGRKAGNAPRSTVLDGRLVAKGYTTTDMGRPTSSSASRAATAXXXXXXXXXXXARGEG-------GWGLAMSGEYPDLEGTDPYAINNAMAETGT 212          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig972.18691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDR3_ECTSI4.470e-23059.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L5M6_9PHAE3.700e-19961.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L443_9PHAE1.210e-6562.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 444..645
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 419..443
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..418
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.697
NoneNo IPR availableTMHMMTMhelixcoord: 421..443

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig972contigL-elsbetiae_contig972:14206..20148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig972.18691.1mRNA_L-elsbetiae_contig972.18691.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig972 13861..20372 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig972.18691.1 ID=prot_L-elsbetiae_contig972.18691.1|Name=mRNA_L-elsbetiae_contig972.18691.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=646bp
MGFFSHTSRWHSRASVIALALAAVASTCRGEQVLVASLIDDITYSDIVAN
GDCHNGCKREEHAVAHLEGTPATPSCELQTISPFDTATPPPGLLRASIYC
EDSTGALVEQGVRPCIYEVCVDFKWTAGINGEEGQLTYDVVIDRAAKPNA
PHTVYVDLSVGVDPSTTNSNVDSCVAVGECVGLQCGQEYTAEITMTDEFG
DGWIGGAEGFANLWELWTVKPEGGSLVTRGTLADNHESGTTFTCLEDGTY
FFNTTANAAFADDMGWGICEKHGLAGEGLEFTVTNGVCDEESALKIERKT
AEETSDAEASYCTLPAQGEDFRTSTCTSLSSGMKIEGVGLFYDDRCNHAD
LSGCGARSIDACRLCFRNREEWLIAYPFDRIPDWELCPCCVAETFGESCE
TGGGGGGGPDEGVIIGVSVGIAGVLAIACCLSCAFGTTIVRFLRRMKKQK
HAEDQLDLDVHGTGISAFPESPSNGGGTMRGGGGGGTQGNRDRGRSGHFP
IPRFDSIRGRFDSGIFASNATGGGSGGQVQAGVNVGGGGARGDLEKITAE
RAEGVSTTAQSTPSGLHGNVAPRSTVLDERLVAQGYATGDVGRPLSGTAT
AARGGGSGGQDQTGWGLAMSGEYPDLEGTDPYAVDNAMAETGTTR*
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