prot_L-elsbetiae_contig9719.18689.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9719.18689.1
Unique Nameprot_L-elsbetiae_contig9719.18689.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length79
Homology
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: D8LG25_ECTSI (NADH dehydrogenase (Ubiquinone) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG25_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 1.900e-33
Identity = 68/76 (89.47%), Postives = 75/76 (98.68%), Query Frame = 0
Query:    1 MMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAASAAAGTAFSVTNAILDKGLDILERSSKD 76
            MMNLGGLDGS+TTLGGRVKL+GKAAGLARRAVYAVRMPTNPQR+RAAASAAAGTAFSVTNAI+DKGL+ +ERSSK+
Sbjct:  468 MMNLGGLDGSLTTLGGRVKLSGKAAGLARRAVYAVRMPTNPQRVRAAASAAAGTAFSVTNAIIDKGLNFIERSSKE 543          
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: A0A836CDT3_9STRA (NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDT3_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 8.290e-13
Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    1 MMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAASAAAGTAFSVTNAILDKGLDILERSSKDRQ 78
            M++LG  DG+++ LG RV L G AA  ARRAVYA+RMPT PQR  AAAS A  TA   ++ +LD GL +L++    R+
Sbjct:  384 MVSLGAADGTMSALGERVTLRGPAAAAARRAVYALRMPTAPQRAAAAASIAVNTAAKASSLLLDMGLSVLDKLMDKRE 461          
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Match: A0A482SY71_9ARCH (Pyr_redox_2 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SY71_9ARCH)

HSP 1 Score: 50.8 bits (120), Expect = 1.080e-5
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    1 MMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAASAAAGT 54
            M++LG  D ++TTLGG + L G  A L RRAVYAVRMPT  Q ++A  +A+A T
Sbjct:  136 MLSLGDADATITTLGGLLGLKGPLAALGRRAVYAVRMPTPTQTVKALITASAVT 189          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9719.18689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LG25_ECTSI1.900e-3389.47NADH dehydrogenase (Ubiquinone) n=1 Tax=Ectocarpus... [more]
A0A836CDT3_9STRA8.290e-1351.28NADH dehydrogenase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A482SY71_9ARCH1.080e-553.70Pyr_redox_2 domain-containing protein n=1 Tax=arch... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9719contigL-elsbetiae_contig9719:3259..5750 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9719.18689.1mRNA_L-elsbetiae_contig9719.18689.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9719 2826..7421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9719.18689.1 ID=prot_L-elsbetiae_contig9719.18689.1|Name=mRNA_L-elsbetiae_contig9719.18689.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=79bp
MMNLGGLDGSVTTLGGRVKLTGKAAGLARRAVYAVRMPTNPQRLRAAASA
AAGTAFSVTNAILDKGLDILERSSKDRQ*
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