prot_L-elsbetiae_contig9708.18680.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9708.18680.1
Unique Nameprot_L-elsbetiae_contig9708.18680.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length89
Homology
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BLAST of mRNA_L-elsbetiae_contig9708.18680.1 vs. uniprot
Match: D7FWJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWJ1_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 3.170e-12
Identity = 54/84 (64.29%), Postives = 56/84 (66.67%), Query Frame = 0 
Query:    8 NGDV--SASSATAIPPPAYKHKQPPTSAPGDRPDPAPSAASLADSSYXXXXXXXXXXXSSSSIMLNSTATVMSEAVLSTAVRDG 89
            NGDV  S  S   +PPPAYK   PP SA   RPDPAPSAASLADSSY           S SS MLNSTATVMSEAVLSTAV +G
Sbjct:  272 NGDVPGSTGSTAGVPPPAYK---PPMSA---RPDPAPSAASLADSSYQYPDPSPAN--SPSSAMLNSTATVMSEAVLSTAVGEG 347
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9708.18680.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FWJ1_ECTSI3.170e-1264.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9708contigL-elsbetiae_contig9708:94..1306 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9708.18680.1mRNA_L-elsbetiae_contig9708.18680.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9708 85..1306 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9708.18680.1 ID=prot_L-elsbetiae_contig9708.18680.1|Name=mRNA_L-elsbetiae_contig9708.18680.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
MAGGSGYNGDVSASSATAIPPPAYKHKQPPTSAPGDRPDPAPSAASLADS
SYQYPDPSPANSPSSSSIMLNSTATVMSEAVLSTAVRDG
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