prot_L-elsbetiae_contig9701.18676.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9701.18676.1
Unique Nameprot_L-elsbetiae_contig9701.18676.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1071
Homology
BLAST of mRNA_L-elsbetiae_contig9701.18676.1 vs. uniprot
Match: A0A6H5KEF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEF4_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 4.340e-56
Identity = 430/1213 (35.45%), Postives = 512/1213 (42.21%), Query Frame = 0
Query:   21 SPMLTAHLR-GPQKPRDKPSRKQHQHQPAGRGR-PFKGRGVRPQTWNEED-------GAXXXXXXXXXXXXXXXXXXXXXXXVVPGQQRPGTNPPGRIAQQNHQNQMRLVARNPEDAAADGDP----FLNAQVSPGALSMVSCSTALSRQSR-GGSVEAHGXXXXXXXXPGFNDSDKHLNTLAGVGAGTAWRGIMSSTSAATVELAPGLGRSAFEDISMSPSI-PLRGNDLAGVSRAMP-AASVGEVPSLALGRKGAAFASTGXXXXXS--------NVLAAQGSRSRPL--DESFSSSPTRGFGVGVGG-----RTDVPSLTVAHAPGKVYQPVVNAAXXXXXXXSHQQKRLSGVAVARGTPAAHGNGIQHGGATRAVGAAGGGGSGDGAPPFRLPSSMRLMSFGSRASSIVSDWDQEDQXXXXXXXXXXXXXXREDLGEDTSKLARRPTRLDMLSTFGSHSHVHSQAEDPSATAPPXXXXXXXXXXXXXXXXXESGGDGQDEENRGRRSASGTRRSDKRG-----DRISQRXXXXXXXXXXXXXXXXXXXI----------------------VAESDVRSG-RDHRRSASRSIAL-RAD--RKKTAAGTSPHPLSPTTRPRSSTAAXXXXXXXXXXXHQRHXXXXXXXXXXXXXRGAHGKE---LSPPRSQSLRAGGDRXXXXXXXXXGVKHRRGVSVSGIHGSMANKKSIFAV------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPPTKGRDGDKLLATDANSSSRPGSRRGAGAAVSGAPQEID----------LGKPADTTTATTXGXXXXXXXXXXTLAPSTRPLSSPRSSSARKTATIRK-KVHPLHAIASLFRMRRNFSRSSSWCSSDDGGVMVGCGSGRDXXXXX-------------------TAVG----------FSTNGG--------------GGQPRLS--LRRLESRESANA--RRAHGGXXXGFVGWLWRAVMRQQAARQAGRPRGTDSGRRSPASSSGS-----------VEGASPL-PLRAARASVRNGEGKEAAGLTGAAAAKASNSQ------QRPQLSIGHSLPPRISAWRPKSA---SVKNGSRQGQQQQRRSGP-AGVGCGSIVGGCISQFYDPPAMDEEDTMEISVG--------GGGGCRKVPSPEEEAEERARVQQLLRTSQVHMNKYSSMRS 1068
            SPMLT +LR GP +    P++      PAGRGR  FKGRGVRPQTW+E+D       G+                       +  G+ +                  RLV R+P+ AAA        FLN QVSPGALSMVSCST  SR S  GG   A G          FND+DKHL+TLA V A  A RG     ++A  EL  GLGR AFE I++SP   P RGNDLAGVS+ +P AA+V  VPSL       A A T      +        +VL +Q SRS     DES  SS   G     GG     R + PSLTVAHAPG++YQPV            HQ++     AV RGTPA H NG+QH   T   G       GDGA PFRLPS MRLMSFGSRASS+VS     +        XXXXXXX  D   D    ARRPT+L+MLSTFGSHSH                               E+G  G D    G RS +G  +    G     DR  Q XXXXXXXXXXXXXXXXXXX                       +AESD RSG RD R S+SRSI++ R D  R     G S HP  PT +  SST +     XXXXXX    XXXXXXXXXXXXX    G++    SP RS+SL AG                RR  SV+ +                         +                                  +GR+G  + A D+  + RP +  G     SG     D          L  PA  T AT+                   P S+PR +SARKT T++K KV    AIAS+FR +++  RS S CSS  GG +VG G    XXXXX                   TAVG          +S+N G                   LS    R+ESRE  NA     HGG   G VGWLW+ + RQ   R                                V G SP+   R   A  +   G     L    A  A+ S       Q  Q+S+G+ L     A RPKSA   S  NGS    +QQ R G  A VG G++                                 GG   R        AE   RVQQLLRTSQ+HM K+ S+ S
Sbjct:  569 SPMLTGYLRCGPGQENRTPAKL-----PAGRGRGAFKGRGVRPQTWHEDDRPAEGGGGSSSPRPCGIAAAVGVRQAKGGGLYLADGEAQXXXX---------XXXXXRLVVRDPKAAAASNSNHDACFLNDQVSPGALSMVSCSTTYSRLSAIGGGGTADGT---------FNDNDKHLDTLARVAADIARRG-----ASANAELVTGLGRGAFEKITVSPGTHPRRGNDLAGVSKVIPPAAAVASVPSLESRTTAVATAPTTIGKWTAADAYGARPHVLNSQPSRSELFVDDESSVSSDDDGCSASSGGYSSGVRLEPPSLTVAHAPGRIYQPVTAGLKP------HQKQ-----AVGRGTPATHSNGLQHHHHTAVAG------DGDGARPFRLPSDMRLMSFGSRASSVVSPRFSGEVELSKVAAXXXXXXXAYDSKSD---FARRPTKLEMLSTFGSHSHGRLSG-------------------------GEAGSGGTD----GSRSNAGDEKPRSGGXXXXKDREYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNNAGGGLSLAESDKRSGSRDRRFSSSRSISVERPDYGRVSEPRGPSGHPRPPTPKKASSTVSSETGSXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDHQDASPLRSRSLCAG----RAGTAITPTSSRRRSGSVNLVXXXXXXXXXXXXXXXXXXXXXXXXXSRSQRRRGAAAASSADTGGKAFDWREWRSGGGGKEEGRNGG-VAAADSAKTGRPMAEEGVLGDPSGXXXXXDFEVVVAAGPSLSSPA-ATRATSLSKESCRRWSRVLKKTPVAP-SNPRPASARKTPTVKKRKVRAFLAIASIFR-KKSRGRSGS-CSSSSGGSVVGNGGDATXXXXXXXXXXXXXXDDEERTVAAATAVGSNCRDGPAGRYSSNAGXXXXXXXXXXXXXRSSSINLSRGFNRMESRELTNAAHNNRHGGPG-GLVGWLWKRITRQDPPRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYVSGVSPMITARMGSAGEQQQHGDRRVVLVSGGAGSAAKSPAGNNPLQNQQMSVGNPL----CALRPKSAGHNSKSNGSSICPEQQHRYGSGASVGAGAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGVDSRSASWRLPSAEGGRRVQQLLRTSQLHM-KHRSLHS 1689          
BLAST of mRNA_L-elsbetiae_contig9701.18676.1 vs. uniprot
Match: D8LQT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQT8_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 3.240e-51
Identity = 419/1183 (35.42%), Postives = 498/1183 (42.10%), Query Frame = 0
Query:   21 SPMLTAHLR-GPQKPRDKPSRKQHQHQPAGRGR-PFKGRGVRPQTWNEEDGAXXXXXXXXXXXXXXXXXXXXXXXVVPGQQRPGTNPPGRIAQQNHQNQMRLVARNPEDAAADGDP-------FLNAQVSPGALSMVSCSTALSRQSR-GGSVEAHGXXXXXXXXPGFNDSDKHLNTLAGVGAGTAWRGIMSSTSAATVELAPGLGRSAFEDISMSPSI-PLRGNDLAGVSRAMPAAS-VGEVPSLALGRKGAAFASTGXXXXXS--------NVLAAQGSRSRPL--DESFSSSPTRGFGVGVGG-----RTDVPSLTVAHAPGKVYQPVVNAAXXXXXXXSHQQKRLSGVAVARGTPAAHGNGIQHGGATRAVGAAGGGGSGDGAPPFRLPSSMRLMSFGSRASSIVSDWDQEDQXXXXXXXXXXXXXXREDLGEDTSKLARRPTRLDMLSTFGSHSHVHSQAEDPSATAPPXXXXXXXXXXXXXXXXXESGGDGQDEENRGRRSASGTRRSDKRGDRISQRXXXXXXXXXXXXXXXXXXXI---------------------------VAESDVRSG-RDHRRSASRSIAL-RAD--RKKTAAGTSPHPLSPTTRPRSSTAAXXXXXXXXXXXHQRHXXXXXXXXXXXXXR--------------GAHGKELSPPRSQSLRAGGDRXXXXXXXXXGVKHRRGVSVSGIHGSMANKKSIFAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSPPTKGRDGDKLLATDANSSSRPGSRRGAGAAVSGAPQEID--------LGKPADTTTATTXGXXXXXXXXXXTLAPSTRPLSSPRSSSARKTATIRK-KVHPLHAIASLFRMRRNFSRSSSWCSSDDGG----------------------VMVGCGSGRDXXXXXTAVGFSTNGGGGQPRLSLR---RLESRESANARR--AHGGXXXGFVGWLWRAVMRQQAARQAGRPRGTDSGRRSPASS------------SGSVEGASPL-PLRAARASVRNGEGKE-----AAGLTGAAAAKASNS--QQRPQLSIGHSLPPRISAWRPKSAS---VKNGSRQGQQQQRRSGP-AGVGCGSI----VGGCISQFYDPPAMDEEDTMEISVGG---GGGCRKVPSPEEEAEERARVQQLLRTSQVHMNKYS 1064
            SPMLT HLR GP +    P++      PAGRGR  FKGRGVRPQTW+E+D                            G                                            FLN QVSPGALSM SCSTA SR S  GG   A G          FNDSDKHL+TLA V A  A RG     ++A  EL  GLGR AFE I++SP   P RGNDLAGVS+A+PAA+ V  VPSL       A A T      +        +VL +Q SRS     DES  SS   G     GG     R + PSLTVAHAPGK+Y PV   +        HQ++     AV RGTPA H NG+ H             G GDGAPPFRLPS MRLMSFGSRASS+VS      +        XXXXXX     +  S LARRPT+L+MLSTFGSHSH      D                         +G  G D    G  S +G  +    G      XXXXXXXXXXXXXXXXXXX                            +AESD RSG RD R  +SRSI++ RAD  R     G S HP  PT +  S    XXXXXXXXXXX    XXXXXXXXXXXXX               G   ++ SP RS+SL A  DR            HRR  S   + GS + +       XXXXXXXX                          +G DG  + A D+  ++ P +  G     S    +++        L  PA   T  T             L P   P +S R +SARKT T++K KV    AIAS+FR +                                      V   C  G          G + +         LR   R+ESRE  NA R   HGG     VGWLW+ + RQ                                  S  V G SP+   R   A  +   G       A G   +A + A N+  Q +  +S+G+ L     A R KSAS     NGS    +QQ R G  A +G G+I       CI+QFYD PA D+ D     VGG        ++PS    AE   RVQQLLRTSQ+HM  +S
Sbjct:  571 SPMLTGHLRCGPGQENRAPAKL-----PAGRGRGAFKGRGVRPQTWHEDDRPTEEGGGGPSSPRPCGIAAAAGVRQAKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHDACFLNDQVSPGALSMASCSTAYSRLSAIGGGGAADGN---------FNDSDKHLDTLARVAADIARRG-----ASANAELVTGLGRGAFEKITVSPGTRPRRGNDLAGVSKAIPAAAAVASVPSLESRSTAVAAAPTTIGKWTAADAYGARPHVLNSQPSRSELFVDDESSVSSDDDGCSASSGGYSSGVRLEPPSLTVAHAPGKIYLPVTAGSQ------QHQKQ-----AVGRGTPATHSNGLHHXXXXXXXX-----GDGDGAPPFRLPSDMRLMSFGSRASSVVSPR-VSGEVELSKVAAXXXXXXXXXAYDAKSDLARRPTKLEMLSTFGSHSHGRLSGGD-------------------------AGYGGTD----GSHSNAGDEKPRSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGLSLAESDKRSGSRDRRFGSSRSISVERADYGRVGEPRGPSGHPRPPTPKKASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDHQDASPLRSRSLCA--DRAGTGVSAFS--SHRRSGSADLVVGSRSQRXXXXXXXXXXXXXXXTGGKKAFDWREWRSGGGGKE------EGMDGG-VAAADSAKTAGPLAEEGVLGDPSVGADDVEVVVVAGPSLSSPA--ATRATSFSKESCRRWSRVLKPPGAPSNS-RPASARKTPTVKKRKVRAFLAIASIFRRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSSCRDGAPGRSSNATAGGTASSNRSSSINLLRGFNRMESRELTNAARNNRHGGPGS-LVGWLWKRITRQDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSYVNGVSPMITARMGPAGHQQQHGDRRVVLVAGGAESSAKSPAGNNPLQNQQPMSVGNPL----CALRSKSASHNFKSNGSSVCPEQQHRYGSGASLGAGAIGXXXXXXCITQFYDAPAADDSDEEGEEVGGVDSRSASWRLPS----AEGGRRVQQLLRTSQLHMRHHS 1665          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9701.18676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KEF4_9PHAE4.340e-5635.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQT8_ECTSI3.240e-5135.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9701contigL-elsbetiae_contig9701:274..4790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9701.18676.1mRNA_L-elsbetiae_contig9701.18676.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9701 274..4790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9701.18676.1 ID=prot_L-elsbetiae_contig9701.18676.1|Name=mRNA_L-elsbetiae_contig9701.18676.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1071bp
AGGGRHQDDGSSSDDNPPPPSPMLTAHLRGPQKPRDKPSRKQHQHQPAGR
GRPFKGRGVRPQTWNEEDGAAAVETGGGGGGDGGGGGGGGGGAVVPGQQR
PGTNPPGRIAQQNHQNQMRLVARNPEDAAADGDPFLNAQVSPGALSMVSC
STALSRQSRGGSVEAHGGGDDDDDDPGFNDSDKHLNTLAGVGAGTAWRGI
MSSTSAATVELAPGLGRSAFEDISMSPSIPLRGNDLAGVSRAMPAASVGE
VPSLALGRKGAAFASTGGGGGGSNVLAAQGSRSRPLDESFSSSPTRGFGV
GVGGRTDVPSLTVAHAPGKVYQPVVNAAAAAAAGSSHQQKRLSGVAVARG
TPAAHGNGIQHGGATRAVGAAGGGGSGDGAPPFRLPSSMRLMSFGSRASS
IVSDWDQEDQRQRRRRQQQQQRQQREDLGEDTSKLARRPTRLDMLSTFGS
HSHVHSQAEDPSATAPPAAAANAGRRSRSSAGSEESGGDGQDEENRGRRS
ASGTRRSDKRGDRISQRRSRSSGSQVGGSRRYSSGSIVAESDVRSGRDHR
RSASRSIALRADRKKTAAGTSPHPLSPTTRPRSSTAAPGGGGGGGGQTHQ
RHSSVSSASRARGGGRGAHGKELSPPRSQSLRAGGDRAAAAAAAAGGVKH
RRGVSVSGIHGSMANKKSIFAVAAAAPPLPPPSAGGGASGSTGGDRKSRR
RSRSPPTKGRDGDKLLATDANSSSRPGSRRGAGAAVSGAPQEIDLGKPAD
TTTATTTGEAEDAAAAATTLAPSTRPLSSPRSSSARKTATIRKKVHPLHA
IASLFRMRRNFSRSSSWCSSDDGGVMVGCGSGRDDDDDRTAVGFSTNGGG
GQPRLSLRRLESRESANARRAHGGGGGGFVGWLWRAVMRQQAARQAGRPR
GTDSGRRSPASSSGSVEGASPLPLRAARASVRNGEGKEAAGLTGAAAAKA
SNSQQRPQLSIGHSLPPRISAWRPKSASVKNGSRQGQQQQRRSGPAGVGC
GSIVGGCISQFYDPPAMDEEDTMEISVGGGGGCRKVPSPEEEAEERARVQ
QLLRTSQVHMNKYSSMRSGSF
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