prot_L-elsbetiae_contig970.18673.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig970.18673.1
Unique Nameprot_L-elsbetiae_contig970.18673.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length258
Homology
BLAST of mRNA_L-elsbetiae_contig970.18673.1 vs. uniprot
Match: A0A6H5JP24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP24_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 5.700e-60
Identity = 119/244 (48.77%), Postives = 148/244 (60.66%), Query Frame = 0
Query:    1 QYRALVNCIFDLEWTHDDSRIALGCGDGKVRVHDTEMHAELLVLCGHGGSVKTIAASPVDTDILLSGSRDGSFALWDTRSRSRSRQDRDTPEMDGLHRMTAMESSLLATAPANRVPTGYLSPIEQVYRANYGVLNQHRKRPRSFAGRDGEYPDLAATAAXXXXXXXXXXXXXXXXXXXGVRPGLKWRTFSGLPCHSSVTAVCWMTDGQKFLTAGQDGLVKLWDTRYAVRPLQAACPADHHASPP 244
            QYRALVNCIFD+EW HDD RIAL C D K+RVHDTE   E++VL GH GSVKTI+A+P+D  ++LSG+RDGSFA+WDTR +    Q R   ++  ++R+ A E S LA  PANR+    L+P+EQV+ A+Y   ++  K PRS+   D                               V+ G       G PC S+VT+V WM DGQ FLTAGQDGL+KLWDTRY   PLQ A P D  AS P
Sbjct:  132 QYRALVNCIFDVEWLHDDGRIALACADSKIRVHDTETCVEVVVLRGHEGSVKTISANPLDNCVILSGARDGSFAVWDTRLQ----QGRPVKKL--MNRVVAEEYSALAWTPANRLQRRLLTPVEQVFMAHY-TEDRDPKIPRSYVRMDET-----------------------------VKGGFDGMV-CGRPCASTVTSVQWMPDGQTFLTAGQDGLIKLWDTRYVHHPLQEADPDDESASLP 338          
BLAST of mRNA_L-elsbetiae_contig970.18673.1 vs. uniprot
Match: D8LHZ2_ECTSI (Denticleless homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ2_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 5.450e-59
Identity = 120/244 (49.18%), Postives = 149/244 (61.07%), Query Frame = 0
Query:    1 QYRALVNCIFDLEWTHDDSRIALGCGDGKVRVHDTEMHAELLVLCGHGGSVKTIAASPVDTDILLSGSRDGSFALWDTRSRSRSRQDRDTPEMDGLHRMTAMESSLLATAPANRVPTGYLSPIEQVYRANYGVLNQHRKRPRSFAGRDGEYPDLAATAAXXXXXXXXXXXXXXXXXXXGVRPGLKWRTFSGLPCHSSVTAVCWMTDGQKFLTAGQDGLVKLWDTRYAVRPLQAACPADHHASPP 244
            QYRAL NCIFD+EW HDD RIAL C D K+RVHDTE   E++VL GH GSVKTI+A+P+D  ++LSG+RDGSFA+WDTR +    Q R   ++  ++R+ A E S +A APANR+    L+P+EQV+  +Y   ++  K PRS+   D                               V+ G       G PC S+VT+V WM DGQKFLTAGQDGLVKLWDTRY   PLQ A P D  ASPP
Sbjct:  139 QYRALANCIFDVEWLHDDGRIALACADSKIRVHDTETCMEVVVLRGHEGSVKTISANPLDNCVVLSGARDGSFAVWDTRLQ----QGRPVKKL--MNRVVAEEYSAMAWAPANRLQRRMLTPVEQVFMVHY-TEDRDPKIPRSYVRMDET-----------------------------VKGGFDGMV-CGRPCASTVTSVQWMPDGQKFLTAGQDGLVKLWDTRYVHHPLQEADPDDESASPP 345          
BLAST of mRNA_L-elsbetiae_contig970.18673.1 vs. uniprot
Match: A0A251RTN2_HELAN (Putative transducin/WD40 repeat-like superfamily protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251RTN2_HELAN)

HSP 1 Score: 90.5 bits (223), Expect = 4.810e-17
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 0
Query:    1 QYRALVNCIFDLEWTHDDSRIALGCGDGKVRVHDTEMHAELLVLCGHGGSVKTIAASPVDTDILLSGSRDGSFALWDTRSRSRSRQDRDT---PEMDGLHRMTAMESSLLATAPANRVPTGYLSPIEQVYRANYGVLN 135
            Q+ A  N IFD+ W  DD+ +   CGD  ++V D++    LL L GH GSVK+++A P + DI++SGSRDGSFALWD R    +R   +T     + G H+ +++++       A+   T  L   ++V  A  G ++
Sbjct:  103 QWLAHDNAIFDVCWIKDDTNLLTACGDHSIKVWDSQERKCLLALTGHTGSVKSVSAHPSNNDIIVSGSRDGSFALWDLRCAKSTRAHSNTLPIATVQGAHKSSSVKTRGRHNKAASMSVTSVLYMKDEVSIATAGAVD 240          
BLAST of mRNA_L-elsbetiae_contig970.18673.1 vs. uniprot
Match: UPI000D62AD6C (denticleless protein homolog A n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D62AD6C)

HSP 1 Score: 89.4 bits (220), Expect = 1.190e-16
Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 0
Query:    7 NCIFDLEWTHDDSRIALGCGDGKVRVHDTEMHAELLVLCGHGGSVKTIAASPVDTDILLSGSRDGSFALWDTRSRSRSR 85
            N IFD+ W  DD+ +   CGD  +++ D+E   +L VL GH GSVK+I+A P + D+++SGSRDGSFALWD RS  R R
Sbjct:  110 NAIFDVCWIKDDTNLLTACGDHSIKLWDSEERKDLAVLTGHTGSVKSISAHPSNYDMIVSGSRDGSFALWDLRSSKRRR 188          
BLAST of mRNA_L-elsbetiae_contig970.18673.1 vs. uniprot
Match: UPI000B8EF229 (denticleless protein homolog A n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8EF229)

HSP 1 Score: 88.2 bits (217), Expect = 2.980e-16
Identity = 49/132 (37.12%), Postives = 75/132 (56.82%), Query Frame = 0
Query:    7 NCIFDLEWTHDDSRIALGCGDGKVRVHDTEMHAELLVLCGHGGSVKTIAASPVDTDILLSGSRDGSFALWDTRSRSRSRQDRDT---PEMDGLHRMTAMESSLLATAPANRVPTGYLSPIEQVYRANYGVLN 135
            N +FDL W  DD+ +   CGD  ++V D++    L  L GH GSVK+I+A P + DI++SGSRDGSFALWD RS   +R   +T     + G H  +++++    +  A+   T  L   ++V  A  G ++
Sbjct:  110 NAVFDLCWIKDDTNLLTACGDHSIKVWDSQERKCLFALTGHTGSVKSISAHPSNHDIIVSGSRDGSFALWDLRSFKSTRAHPNTLTIKTVQGAHMSSSVKTRGRNSKAASMSVTSVLYMKDEVSIATAGAVD 241          
BLAST of mRNA_L-elsbetiae_contig970.18673.1 vs. uniprot
Match: A0A251S822_HELAN (Putative coatomer beta' subunit (COPB2), WD40 repeat, conserved site n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251S822_HELAN)

HSP 1 Score: 86.7 bits (213), Expect = 6.050e-16
Identity = 50/139 (35.97%), Postives = 76/139 (54.68%), Query Frame = 0
Query:    7 NCIFDLEWTHDDSRIALGCGDGKVRVHDTEMHAELLVLCGHGGSVKTIAASPVDTDILLSGSRDGSFALWDTRSRSRSRQDRDTPE----------MDGLHRMTAMESSLLATAPANRVPTGYLSPIEQVYRANYGVLN 135
            N +FDL W  DD+ +   CGD  ++V D++    L  L GH GSVK+I+A P + DI++SGSRDGSFALWD RS   +R   +T E          + G H  +++++    +  A+   T  L   ++V  A  G ++
Sbjct:  110 NAVFDLCWIKDDTNLLTACGDHSIKVWDSQERKCLFALTGHTGSVKSISAHPSNHDIIVSGSRDGSFALWDLRSFKSTRAHPNTFEYYHILRTIKTVQGAHMSSSVKTRGRNSKAASMSVTSVLYMKDEVSIATAGAVD 248          
BLAST of mRNA_L-elsbetiae_contig970.18673.1 vs. uniprot
Match: A0A5N6Q225_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6Q225_9ASTR)

HSP 1 Score: 86.7 bits (213), Expect = 1.020e-15
Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 0
Query:    1 QYRALVNCIFDLEWTHDDSRIALGCGDGKVRVHDTEMHAELLVLCGHGGSVKTIAASPVDTDILLSGSRDGSFALWDTR 79
            ++ A  N IFD+ W  DD+ +   CGD  ++V D++    LL L GH GSVK+I+A P + DI++SGSRDGSFALWD R
Sbjct:  103 EWLAHENAIFDVCWIKDDTNLLTACGDHSIKVWDSQERKCLLALTGHTGSVKSISAHPSNNDIIVSGSRDGSFALWDLR 181          
BLAST of mRNA_L-elsbetiae_contig970.18673.1 vs. uniprot
Match: A0A7J6WNA5_THATH (Denticleless protein-like protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A7J6WNA5_THATH)

HSP 1 Score: 85.9 bits (211), Expect = 1.880e-15
Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 0
Query:    1 QYRALVNCIFDLEWTHDDSRIALGCGDGKVRVHDTEMHAELLVLCGHGGSVKTIAASPVDTDILLSGSRDGSFALWDTR 79
            ++ A  N IFDL W  DDS+I    GD  ++V DTE    + +L GH GSVK+I   P +TD+L+SGSRDGSFALWD R
Sbjct:  106 EWVAHYNSIFDLCWNKDDSQILTASGDQSIKVWDTERRECVGILTGHTGSVKSICPHPSNTDLLVSGSRDGSFALWDLR 184          
BLAST of mRNA_L-elsbetiae_contig970.18673.1 vs. uniprot
Match: A0A2G9GGT1_9LAMI (Peroxisomal targeting signal type 2 receptor n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GGT1_9LAMI)

HSP 1 Score: 84.0 bits (206), Expect = 2.280e-15
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    7 NCIFDLEWTHDDSRIALGCGDGKVRVHDTEMHAELLVLCGHGGSVKTIAASPVDTDILLSGSRDGSFALWDTR 79
            N IFDL WT DD+ I    GD  +++ DT+    +  L GH GS+K+I+  P + D+++SGSRDGSFA+WDTR
Sbjct:  109 NAIFDLCWTQDDANILTASGDQSIKIWDTQRQKCIRALMGHTGSIKSISCHPTNQDLVVSGSRDGSFAVWDTR 181          
BLAST of mRNA_L-elsbetiae_contig970.18673.1 vs. uniprot
Match: A0A2J6LC29_LACSA (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6LC29_LACSA)

HSP 1 Score: 85.5 bits (210), Expect = 2.540e-15
Identity = 41/88 (46.59%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    7 NCIFDLEWTHDDSRIALGCGDGKVRVHDTEMHAELLVLCGHGGSVKTIAASPVDTDILLSGSRDGSFALWDTRSRSRSRQDRDTPEMD 94
            N IFD+ W  +D+ +   CGD  +++ DT+    +  L GH GSVK+I+A PV+ DI++SGSRDGSFALWD R+  R R    T  +D
Sbjct:  109 NAIFDVCWIKEDTNLLTACGDHSIKLWDTQEQKCIGGLIGHTGSVKSISAHPVNEDIIVSGSRDGSFALWDLRNSKRRRSHFSTSPID 196          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig970.18673.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JP24_9PHAE5.700e-6048.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHZ2_ECTSI5.450e-5949.18Denticleless homolog n=1 Tax=Ectocarpus siliculosu... [more]
A0A251RTN2_HELAN4.810e-1736.23Putative transducin/WD40 repeat-like superfamily p... [more]
UPI000D62AD6C1.190e-1651.90denticleless protein homolog A n=1 Tax=Cynara card... [more]
UPI000B8EF2292.980e-1637.12denticleless protein homolog A n=1 Tax=Helianthus ... [more]
A0A251S822_HELAN6.050e-1635.97Putative coatomer beta' subunit (COPB2), WD40 repe... [more]
A0A5N6Q225_9ASTR1.020e-1550.63Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A7J6WNA5_THATH1.880e-1553.16Denticleless protein-like protein n=2 Tax=Thalictr... [more]
A0A2G9GGT1_9LAMI2.280e-1549.32Peroxisomal targeting signal type 2 receptor n=1 T... [more]
A0A2J6LC29_LACSA2.540e-1546.59Uncharacterized protein n=2 Tax=Lactuca TaxID=4235... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 1..34
e-value: 13.0
score: 10.0
coord: 37..77
e-value: 3.2E-4
score: 30.0
coord: 182..223
e-value: 9.2E-6
score: 35.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 42..77
e-value: 0.012
score: 16.4
coord: 192..223
e-value: 2.9E-5
score: 24.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 196..225
score: 10.475
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 44..86
score: 12.514
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 4..243
e-value: 2.1E-27
score: 98.0
NoneNo IPR availablePANTHERPTHR22852LETHAL 2 DENTICLELESS PROTEIN RETINOIC ACID-REGULATED NUCLEAR MATRIX-ASSOCIATED PROTEINcoord: 2..242
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 2..86
score: 14.714
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 191..232
score: 8.703
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 6..227

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig970contigL-elsbetiae_contig970:10672..14769 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig970.18673.1mRNA_L-elsbetiae_contig970.18673.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig970 10672..14771 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig970.18673.1 ID=prot_L-elsbetiae_contig970.18673.1|Name=mRNA_L-elsbetiae_contig970.18673.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=258bp
QYRALVNCIFDLEWTHDDSRIALGCGDGKVRVHDTEMHAELLVLCGHGGS
VKTIAASPVDTDILLSGSRDGSFALWDTRSRSRSRQDRDTPEMDGLHRMT
AMESSLLATAPANRVPTGYLSPIEQVYRANYGVLNQHRKRPRSFAGRDGE
YPDLAATAAATGTATATGTATATAAASAGVRPGLKWRTFSGLPCHSSVTA
VCWMTDGQKFLTAGQDGLVKLWDTRYAVRPLQAACPADHHASPPGRRRPP
LQSDASSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf