prot_L-elsbetiae_contig970.18672.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig970.18672.1
Unique Nameprot_L-elsbetiae_contig970.18672.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length85
Homology
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BLAST of mRNA_L-elsbetiae_contig970.18672.1 vs. uniprot
Match: A0A6H5JP24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP24_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 2.070e-33
Identity = 56/71 (78.87%), Postives = 67/71 (94.37%), Query Frame = 0 
Query:    9 DLLVGLASPGAFPCPEGSPSYNVQFSKKAGDGHLVAFGTEFGQLVVIDTRAEARVRRDHSGPVGWGETDRT 79
            D ++GLASPGAFPCPEGSP+YN+QFSK+AGDGHLVAFGTE G LV++DTRAEA V+RDH+GPVGWG+TDR+
Sbjct:   26 DYVMGLASPGAFPCPEGSPTYNLQFSKRAGDGHLVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRS 96
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BLAST of mRNA_L-elsbetiae_contig970.18672.1 vs. uniprot
Match: D8LHZ2_ECTSI (Denticleless homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ2_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.030e-32
Identity = 55/71 (77.46%), Postives = 66/71 (92.96%), Query Frame = 0 
Query:    9 DLLVGLASPGAFPCPEGSPSYNVQFSKKAGDGHLVAFGTEFGQLVVIDTRAEARVRRDHSGPVGWGETDRT 79
            D ++GLASPGAFPCPEGSP+YN+QFSK+AGDGH VAFGTE G LV++DTRAEA V+RDH+GPVGWG+TDR+
Sbjct:   32 DYVMGLASPGAFPCPEGSPTYNLQFSKRAGDGHFVAFGTERGTLVIVDTRAEAVVQRDHNGPVGWGQTDRS 102
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig970.18672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JP24_9PHAE2.070e-3378.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHZ2_ECTSI2.030e-3277.46Denticleless homolog n=1 Tax=Ectocarpus siliculosu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig970contigL-elsbetiae_contig970:10303..10557 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig970.18672.1mRNA_L-elsbetiae_contig970.18672.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig970 10303..10557 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig970.18672.1 ID=prot_L-elsbetiae_contig970.18672.1|Name=mRNA_L-elsbetiae_contig970.18672.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp
APHHPSDVDLLVGLASPGAFPCPEGSPSYNVQFSKKAGDGHLVAFGTEFG
QLVVIDTRAEARVRRDHSGPVGWGETDRTKTISSG
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