prot_L-elsbetiae_contig9699.18669.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9699.18669.1
Unique Nameprot_L-elsbetiae_contig9699.18669.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length299
Homology
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BLAST of mRNA_L-elsbetiae_contig9699.18669.1 vs. uniprot
Match: A0A6H5L7T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7T0_9PHAE)

HSP 1 Score: 399 bits (1026), Expect = 1.340e-137
Identity = 197/233 (84.55%), Postives = 214/233 (91.85%), Query Frame = 0 
Query:    9 LPLPGLHEHFGQA-LSYEKTAVGTTALEQECSTDPAMAELRQHLLRHQITFCVFDMDLTVTAKHTRGALPRDPDTMRSYLESGRVTDAVKTMKLCRALGLTVGIATFQREVDDSSHIGGSHLVRRVLGAIGAGDLVSDRDVVALSPAQYAEMLRHQESYTKNDMIRALFERRGEPYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLVLQHAKVVEPSCTFVPGMSFSAA 240
            +PLP L EHF  A +SY     G  A+EQEC+ DPAMAELRQHLLRH+ITFCVFDMDLTVT  HTRGALPRDPDTMRSYLESGR TDAVKTMKLCRALGLTVGIATFQREVDDS+HIGGSHLVRRVLGAIGAGDLVSDRDVVAL+ +QY+EM+RHQESYTKNDMIR LFERRGE YSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGL+L++AKVVEPSCTFVPG++FS++
Sbjct:    9 VPLPALREHFATAFVSYPNMTAGNAAIEQECALDPAMAELRQHLLRHRITFCVFDMDLTVTKMHTRGALPRDPDTMRSYLESGRATDAVKTMKLCRALGLTVGIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVVALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILRNAKVVEPSCTFVPGLTFSSS 241
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BLAST of mRNA_L-elsbetiae_contig9699.18669.1 vs. uniprot
Match: D8LKV2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV2_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 5.140e-121
Identity = 173/195 (88.72%), Postives = 186/195 (95.38%), Query Frame = 0 
Query:   30 GTTALEQECSTDPAMAELRQHLLRHQITFCVFDMDLTVTAKHTRGALPRDPDTMRSYLESGRVTDAVKTMKLCRALGLTVGIATFQREVDDSSHIGGSHLVRRVLGAIGAGDLVSDRDVVALSPAQYAEMLRHQESYTKNDMIRALFERRGEPYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLVLQHAKV 224
            G  A+EQEC+ DPAMAELRQHLLRH+ITFCVFDMDLTVT  HTRGALPRDPDTMRSYLESGR TDAVKTMKLCRALGLT+GIATFQREVDDS+HIGGSHLVRRVLGAIGAGDLVSDRDVVAL+ +QY+EM+RHQESYTKNDMIR LFERRGE YSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGL+L++AK+
Sbjct:    4 GNAAIEQECALDPAMAELRQHLLRHRITFCVFDMDLTVTKMHTRGALPRDPDTMRSYLESGRATDAVKTMKLCRALGLTIGIATFQREVDDSAHIGGSHLVRRVLGAIGAGDLVSDRDVVALTSSQYSEMIRHQESYTKNDMIRVLFERRGEAYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLILRNAKI 198
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BLAST of mRNA_L-elsbetiae_contig9699.18669.1 vs. uniprot
Match: A0A835YLM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLM2_9STRA)

HSP 1 Score: 177 bits (450), Expect = 9.520e-52
Identity = 87/186 (46.77%), Postives = 129/186 (69.35%), Query Frame = 0 
Query:   44 MAELRQHLLRHQITFCVFDMDLTVTAKHTRGALPR-DPDTMRSYLESGRVTDAVKTMKLCRALGLTVGIATFQREVDDSSHIGGSHLVRRVLGAIGAGDLVSDRDVVALSPAQYAEMLRHQESYTKNDMIRALFERRGEPYSPGNTLLIDDTRRNVEAFVRIGGHGLLVEGGQGLVLQHAKVVEPS 228
            +  +RQ+L  H I + VFDMDLTVT++H+ G L + D  T+ SY++S R TDA+  ++LC  LG+ +G+ATFQ+EVDD++H+GG+ LVR+ L  +G  D + +  +VAL+  +Y  M+ +Q++Y KNDM+R LFER G  + P +TLL+DDT RN+ AF  IGGHGL + G  G+ L +   V P+
Sbjct:   11 LTAIRQYLQEHDIRYVVFDMDLTVTSEHSGGMLLKMDRMTLFSYMDSARDTDALAVIQLCAELGIRMGVATFQKEVDDAAHVGGTPLVRQALQRLGI-DAIEEGSIVALTREEYKVMVTNQDTYNKNDMLRTLFERWGVEFDPTHTLLVDDTVRNIRAFASIGGHGLAIHGHSGMQLDNVTFVSPA 195
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9699.18669.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L7T0_9PHAE1.340e-13784.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKV2_ECTSI5.140e-12188.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YLM2_9STRA9.520e-5246.77Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 91..230
e-value: 2.6E-5
score: 25.8
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 55..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9699contigL-elsbetiae_contig9699:1321..5341 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9699.18669.1mRNA_L-elsbetiae_contig9699.18669.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9699 1265..5690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9699.18669.1 ID=prot_L-elsbetiae_contig9699.18669.1|Name=mRNA_L-elsbetiae_contig9699.18669.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=299bp
MDSGECYSLPLPGLHEHFGQALSYEKTAVGTTALEQECSTDPAMAELRQH
LLRHQITFCVFDMDLTVTAKHTRGALPRDPDTMRSYLESGRVTDAVKTMK
LCRALGLTVGIATFQREVDDSSHIGGSHLVRRVLGAIGAGDLVSDRDVVA
LSPAQYAEMLRHQESYTKNDMIRALFERRGEPYSPGNTLLIDDTRRNVEA
FVRIGGHGLLVEGGQGLVLQHAKVVEPSCTFVPGMSFSAASHTTTTTTAA
SAMVPPNHQRPYHHPQQGAYPHQQYDNHHQQQHYPHQPTPPAAGYGYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR036412HAD-like_sf