prot_L-elsbetiae_contig969.18659.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig969.18659.1
Unique Name	prot_L-elsbetiae_contig969.18659.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	505

Homology

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BLAST of mRNA_L-elsbetiae_contig969.18659.1 vs. uniprot
Match: D7G6G9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6G9_ECTSI)

HSP 1 Score: 303 bits (775), Expect = 1.780e-89
Identity = 188/281 (66.90%), Postives = 215/281 (76.51%), Query Frame = 0

Query:  241 TVATLIFASLLTYALYHASIEALAGQKTRLSFPPPPHGTPAGSAGSWVKVSG-DISASAATAAAADN------AALLE--------GGLEVE-EYYQQIAPAVTWGGTGGGRGEGGKGFRDSEGPAGGWGKGVSVVTVSAWQSLAALGLGFLLSKFWRRYRRPDVIRALSDAERTRRDRCLLVFAAAHLAGTGLEYHGYGVVGAASAEVLRSTEGAFFCLLSLNVGMQRLGLASVPTLLLALGLALAATPTSGDLAAGWSGLRASLAANFLLAVRAIAAKV 505
            T+ATLI ASLLTYALY+AS+EALAGQ+TRLS P     + +   GS +  SG D+ A   T   A         ALLE        GG+  + EYY+++ PAV+WGG       GG+        AG WGKGVSVVTVSAWQ+LAALG+GFL+S+FWRR+RRP+V RALSDAERTRR++ LLVFAAAHLAGTGLEYHGYGV+GAA+AEVLRSTE AFFCLLSLNVGMQR GLASVPTLLLALGLALAATPT+GDL AGW GLRASLAAN LLAVRAIAAK+
Sbjct:  251 TIATLILASLLTYALYNASVEALAGQRTRLSVPRRHPSSASARGGSLIGTSGRDVPAEIGTTGGAXXXXXXXXTALLEDEDDHLSDGGIGSKVEYYERVPPAVSWGGGA----NGGEXXXXGAAVAG-WGKGVSVVTVSAWQTLAALGVGFLMSRFWRRFRRPEV-RALSDAERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAAFFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANMLLAVRAIAAKM 525

[Close]

BLAST of mRNA_L-elsbetiae_contig969.18659.1 vs. uniprot
Match: A0A6H5L6Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z7_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 1.060e-83
Identity = 178/281 (63.35%), Postives = 207/281 (73.67%), Query Frame = 0

Query:  241 TVATLIFASLLTYALYHASIEALAGQKTRLSFPPPPHGTPAGSAGSWVKVSG-DISASAATAAAA--------------DNAALLEGGLEVE-EYYQQIAPAVTWGGTGGGRGEGGKGFRDSEGPAGGWGKGVSVVTVSAWQSLAALGLGFLLSKFWRRYRRPDVIRALSDAERTRRDRCLLVFAAAHLAGTGLEYHGYGVVGAASAEVLRSTEGAFFCLLSLNVGMQRLGLASVPTLLLALGLALAATPTSGDLAAGWSGLRASLAANFLLAVRAIAAKV 505
            T+ATLI ASL+TYALY+AS+EALAGQ+TRLS P     + +    S +  SG D+ A   T                  ++  L +GG+  + EYY+++  AV+WGG     G  G           GWGKGVSVVTVSAWQ+LAALG GFL+S+FWRR+RRP+V RALSD ERTRR++ LLVFAAAHLAGTGLEYHGYGV+GAA+AEVLRSTE A FCLLSLNVGMQR GLASVPTLLLALGLALAATPT+GDL AGW GLRASLAAN LLAVRAIAAK+
Sbjct:  221 TIATLILASLITYALYNASVEALAGQRTRLSIPRRHPSSASAGGASLIGTSGRDVPAEIVTTGXXXXXXXXXXXXXXEDEDDHLSDGGIGFKVEYYERVPTAVSWGG-----GANGXXXXXXXXAVAGWGKGVSVVTVSAWQTLAALGFGFLMSRFWRRFRRPEV-RALSDGERTRRNKFLLVFAAAHLAGTGLEYHGYGVIGAAAAEVLRSTEAACFCLLSLNVGMQRPGLASVPTLLLALGLALAATPTAGDLRAGWGGLRASLAANILLAVRAIAAKM 495

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig969.18659.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig969.18659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G6G9_ECTSI	1.780e-89	66.90	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L6Z7_9PHAE	1.060e-83	63.35	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 364..381
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 454..472
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 473..483
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 484..502
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 382..453
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 503..505
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..363

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig969	contig	L-elsbetiae_contig969:595..5671 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig969.18659.1	mRNA_L-elsbetiae_contig969.18659.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig969 595..5671 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig969.18659.1 ID=prot_L-elsbetiae_contig969.18659.1|Name=mRNA_L-elsbetiae_contig969.18659.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=505bp
MHSGADMIVSSSTNRWRKRPAHQANGGGSVASGRSPRPGIADRRHQLVVD
GVAAGTNPQAAGGALQPLHQFYYPATAPAAAAARPSPPTADAGWVPSPSP
PKAASAPLALPLPLSLQHQGHSGHATRLAHGGQQGQNCPSLSPPPPAPQP
AQVLQGGGRRRQARSGSGGGGGGGQGSTATPSASSTQERNEQQLLLPPSS
SSSSSSNSGTARSGGGGGGGGSGSGAGGGSGITSASASAATVATLIFASL
LTYALYHASIEALAGQKTRLSFPPPPHGTPAGSAGSWVKVSGDISASAAT
AAAADNAALLEGGLEVEEYYQQIAPAVTWGGTGGGRGEGGKGFRDSEGPA
GGWGKGVSVVTVSAWQSLAALGLGFLLSKFWRRYRRPDVIRALSDAERTR
RDRCLLVFAAAHLAGTGLEYHGYGVVGAASAEVLRSTEGAFFCLLSLNVG
MQRLGLASVPTLLLALGLALAATPTSGDLAAGWSGLRASLAANFLLAVRA
IAAKV