prot_L-elsbetiae_contig968.18652.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig968.18652.1
Unique Nameprot_L-elsbetiae_contig968.18652.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length515
Homology
BLAST of mRNA_L-elsbetiae_contig968.18652.1 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 535 bits (1377), Expect = 1.840e-184
Identity = 341/545 (62.57%), Postives = 361/545 (66.24%), Query Frame = 0
Query:    1 MTMTDRTEEFRGAVNVFRPTVVVVKNSSEAAASRAQSDLGYQKTSEFLQLASSVAVGFEGTSKLIGRLKKLVGRKGFSNNPAAEISEVMKLFEEDMAGLQRDISSLQRHADGKTRGSPPANSQRQMHCAFIVTTLRKSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGNGAAIGAGGPRRRPMRGRPAAPHPPPHSAAATVP------LGDDDEDNKGHKKRV-DGGRAAGLGLAASTAAAVVSSLPFPSG----KPGGGVGKSXXXXXXXXXQGGSPSSWPQKPG-PPPWPAEG-HNGTGYN-------GGAXXXXXXXXXASXX-----------SSGAAVAPPVGGGVFGVGGVGXXXXXXXXXTPARSNGSGIXXXXXXXXYGAAPPGVPVHPPEPPRAGGGATGLRKRPGREDGGDGEEEARRAAWQLQVQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQIMSGNRGIIIKVFIMLILFIWVFLGLMR 514
            MTMTDRT+EF GAV+ FRPTV  V NS EAA  RAQ+DLGY+KTSEFLQLA+SVAVGFEGTS+LIGRLKKLVGRKGFSNNPAAEIS+VMKLFE DMAGLQ+DISSLQR+ADG TRGSPPANSQRQMHCAFIVTTLR+SAQEHTKAFRDAL+LRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFG+                             A +P            DNKGHK     GG+AA             S LPFPSG    + GGG G S               SWPQK   P PW AEG  NG G N       GG                         S+G   A P     FG               PA   GSG         + AAPPG P    E  R GG ATGLRKRPGREDGGD EEE+RRAAWQ+QVQEDSKTRVDESHKVEKMIGDLG MFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQI SGNRGIIIKVFIMLI+ IWVFLGLMR
Sbjct:    1 MTMTDRTKEFHGAVSAFRPTVTAVNNSGEAALIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDISSLQRYADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSGXXXXXXXXXX--------------XXTANLPSXXXXXXXXXXXDNKGHKHGPRKGGKAA-------------SVLPFPSGNGGTRAGGGTGGS---------------SWPQKSAVPAPWSAEGGRNGNGNNCSTGVGKGGYDAVGAMPRATEPAAXXXXXXXRTDSNGGFRAGPHTAPTFG--------SANGYVPPAAGGGSG-------RAHAAAPPGFPPLRTEASRGGGRATGLRKRPGREDGGDAEEESRRAAWQVQVQEDSKTRVDESHKVEKMIGDLGHMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQITSGNRGIIIKVFIMLIVCIWVFLGLMR 488          
BLAST of mRNA_L-elsbetiae_contig968.18652.1 vs. uniprot
Match: A0A835Z5V3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V3_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.010e-26
Identity = 69/184 (37.50%), Postives = 111/184 (60.33%), Query Frame = 0
Query:    3 MTDRTEEFRGAVNVFRPTVVVVKNSSEAAASRAQSDLGYQKTSEFLQLASSVAVGFEGTSKLIGRLKKLVGRKGFSNNPAAEISEVMKLFEEDMAGLQRDISSLQRHADGKT--RGSPPANSQRQMHCAFIVTTLRKSAQEHTKAFRDALLLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLF 184
            M DRT EF+G + V                 R Q +    + ++F +  S++A+  EGT+KLI +L +LVGRKG SN+P  EI++V +LF+ DM  +Q+++S+LQ   DG++  RG+P   SQR  H  +++  L++ AQE   AF+ AL  R AV ++ N+R++ +S +R V  + Q++ PLF
Sbjct:    1 MIDRTAEFQGCIRVLH-------QHDGRPDQRPQYEA--PQPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQAFIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175          
BLAST of mRNA_L-elsbetiae_contig968.18652.1 vs. uniprot
Match: A0A835ZFW2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW2_9STRA)

HSP 1 Score: 105 bits (261), Expect = 6.470e-24
Identity = 50/72 (69.44%), Postives = 61/72 (84.72%), Query Frame = 0
Query:  438 MIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQIMSGNRGIIIKVFIMLILFIWVF 509
            MIG+LG MFS+FS +VAAQEE V+HIEDDVE AH FA +G AHL++YYQ +SGNRGII+KV I+L  F+WVF
Sbjct:    1 MIGELGHMFSKFSALVAAQEETVVHIEDDVEMAHGFAVDGHAHLSRYYQTISGNRGIIVKVLILLAFFVWVF 72          
BLAST of mRNA_L-elsbetiae_contig968.18652.1 vs. uniprot
Match: A0A7S2XXW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXW7_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.350e-15
Identity = 43/95 (45.26%), Postives = 64/95 (67.37%), Query Frame = 0
Query:  420 QVQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQIMSGNRGIIIKVFIMLILFIWVFLGLMR 514
            ++Q  SK RV+E+  +E  I +   MFS+ +TMVA Q E+V  I+DD+E A      G   L +YY I+SGNRG+IIK+FI L++FI++F+ L +
Sbjct:   11 ELQTSSKQRVEEARSIEATISEFATMFSKMATMVAQQGELVTRIDDDMELALGNVSAGHTELTRYYSIISGNRGLIIKIFITLMVFIFLFVVLFK 105          
BLAST of mRNA_L-elsbetiae_contig968.18652.1 vs. uniprot
Match: I2CQ48_NANGC (t-SNARE coiled-coil homology domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ48_NANGC)

HSP 1 Score: 79.3 bits (194), Expect = 2.940e-14
Identity = 44/88 (50.00%), Postives = 62/88 (70.45%), Query Frame = 0
Query:  422 QEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQIMSGNRGIIIKVFIMLILFIWVF 509
            Q D+ +R+ E+  VEK I +LGQ FSR + +VAAQ EVVM I+DD+EAA    ++G A +  Y +I+ GNR +I KVF +L++FI VF
Sbjct:   25 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVMRIDDDMEAALEDVQKGHAEMVNYLRIVKGNRAVIFKVFALLLVFIVVF 112          
BLAST of mRNA_L-elsbetiae_contig968.18652.1 vs. uniprot
Match: F0Y6L6_AURAN (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L6_AURAN)

HSP 1 Score: 77.4 bits (189), Expect = 7.460e-14
Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 0
Query:  421 VQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQIMSGNRGIIIKVFIMLILFIWVF 509
            +++ S+ R+D +H +EK IG LG++FSRFS++VA Q EVV  ++DDVE A    E G A L K  +++ GNR + +KVF +LI  I +F
Sbjct:    2 LEQTSRRRLDTAHNIEKEIGKLGEVFSRFSSLVAQQAEVVERLDDDVEGALGEVEMGHAELLKAQEVLRGNRALFLKVFAVLIALIVLF 90          
BLAST of mRNA_L-elsbetiae_contig968.18652.1 vs. uniprot
Match: A0A7S3H3X9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H3X9_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.010e-12
Identity = 37/80 (46.25%), Postives = 57/80 (71.25%), Query Frame = 0
Query:  427 TRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQIMSGNRGIIIKVFIMLILFI 506
            +R +    V+K IG+L QMFS+ + +V AQEE++  I+ D+++     +EGQ HL KY+Q +S NRG+IIKVF++LI F+
Sbjct:  216 SRAEAVQNVQKTIGELAQMFSKMAVLVTAQEEMIQRIDSDLDSTITNVDEGQQHLLKYFQYISSNRGLIIKVFLILIFFV 295          
BLAST of mRNA_L-elsbetiae_contig968.18652.1 vs. uniprot
Match: A0A485LIS1_9STRA (Aste57867_21905 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIS1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.080e-11
Identity = 52/138 (37.68%), Postives = 88/138 (63.77%), Query Frame = 0
Query:  374 AAPPGVPVHPPEPPRAGGGATGLRKRPGREDGGDGEEEARRAAWQ-LQVQEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQIMSGNRGIIIKVFIMLILFIWVFL 510
            AA P   +HP +P +    A G+R+RP   +G  G   A++   Q L     +++R++++  VE MIG++G M+SR + ++A QEE++  IEDD+  AH+  E G   L KY+  +S NR +I+K+F++L++FI++FL
Sbjct:  190 AAGPTQGLHPVQP-QGPDAAAGMRRRPFM-NGATGSSYAQQQQQQNLMRHRTAQSRLNDAQNVEAMIGEIGGMYSRMTGLLANQEEMLGRIEDDMTTAHSNVEGGYEELMKYFSTVSSNRSLILKIFLVLLVFIYLFL 325          
BLAST of mRNA_L-elsbetiae_contig968.18652.1 vs. uniprot
Match: A0A4D9CWV4_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV4_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.460e-11
Identity = 42/88 (47.73%), Postives = 61/88 (69.32%), Query Frame = 0
Query:  422 QEDSKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQIMSGNRGIIIKVFIMLILFIWVF 509
            Q D+ +R+ E+  VEK I +LGQ FSR + +VAAQ EVV+ I+DD+EAA    ++G   +  Y +I+ GNR +I KVF +L++FI VF
Sbjct:  278 QRDTASRLREARAVEKAIVELGQTFSRMAGLVAAQGEVVVRIDDDMEAALEDVQKGHVEMVNYLRIVKGNRAVIFKVFALLLVFIVVF 365          
BLAST of mRNA_L-elsbetiae_contig968.18652.1 vs. uniprot
Match: A0A6G0WSE7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSE7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.160e-10
Identity = 35/86 (40.70%), Postives = 62/86 (72.09%), Query Frame = 0
Query:  425 SKTRVDESHKVEKMIGDLGQMFSRFSTMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQIMSGNRGIIIKVFIMLILFIWVFL 510
            ++ R++++  +E  I ++G M+SR + ++A+QEE++  IEDD+  AHA  E G   L KY+  +S NR +I+K+F++L+LFI++FL
Sbjct:  224 AQARLNDAQHMEATISEIGGMYSRMTGLLASQEEMLGRIEDDMTTAHANVESGYEELMKYFSTVSSNRSLILKIFLILLLFIYLFL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig968.18652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KU27_9PHAE1.840e-18462.57t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z5V3_9STRA1.010e-2637.50Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZFW2_9STRA6.470e-2469.44t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2XXW7_9STRA3.350e-1545.26Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
I2CQ48_NANGC2.940e-1450.00t-SNARE coiled-coil homology domain-containing pro... [more]
F0Y6L6_AURAN7.460e-1446.07t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S3H3X9_9STRA3.010e-1246.25Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A485LIS1_9STRA1.080e-1137.68Aste57867_21905 protein n=1 Tax=Aphanomyces stella... [more]
A0A4D9CWV4_9STRA2.460e-1147.73t-SNARE coiled-coil homology domain-containing pro... [more]
A0A6G0WSE7_9STRA1.160e-1040.70t-SNARE coiled-coil homology domain-containing pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availableGENE3D1.20.5.110coord: 413..513
e-value: 9.9E-14
score: 52.8
NoneNo IPR availablePANTHERPTHR19957:SF3SYNTAXIN-5coord: 414..510
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 414..510
coord: 3..181
NoneNo IPR availablePANTHERPTHR19957:SF3SYNTAXIN-5coord: 3..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..493
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 494..513
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 514..514
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 419..485
NoneNo IPR availableTMHMMTMhelixcoord: 493..512
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 417..484
e-value: 5.5E-8
score: 42.5
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 459..510
e-value: 8.7E-7
score: 28.9
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 422..484
score: 10.921
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 45..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig968contigL-elsbetiae_contig968:9214..13237 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig968.18652.1mRNA_L-elsbetiae_contig968.18652.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig968 8566..13260 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig968.18652.1 ID=prot_L-elsbetiae_contig968.18652.1|Name=mRNA_L-elsbetiae_contig968.18652.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=515bp
MTMTDRTEEFRGAVNVFRPTVVVVKNSSEAAASRAQSDLGYQKTSEFLQL
ASSVAVGFEGTSKLIGRLKKLVGRKGFSNNPAAEISEVMKLFEEDMAGLQ
RDISSLQRHADGKTRGSPPANSQRQMHCAFIVTTLRKSAQEHTKAFRDAL
LLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGNGAAIGAGGPRRRPM
RGRPAAPHPPPHSAAATVPLGDDDEDNKGHKKRVDGGRAAGLGLAASTAA
AVVSSLPFPSGKPGGGVGKSGGGVTGGGGQGGSPSSWPQKPGPPPWPAEG
HNGTGYNGGAGGGGGVGGGASGYSSGAAVAPPVGGGVFGVGGVGLGHGAG
ATSTPARSNGSGIGAHGRGLGYGAAPPGVPVHPPEPPRAGGGATGLRKRP
GREDGGDGEEEARRAAWQLQVQEDSKTRVDESHKVEKMIGDLGQMFSRFS
TMVAAQEEVVMHIEDDVEAAHAFAEEGQAHLAKYYQIMSGNRGIIIKVFI
MLILFIWVFLGLMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR010989SNARE