prot_L-elsbetiae_contig968.18651.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig968.18651.1
Unique Nameprot_L-elsbetiae_contig968.18651.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length424
Homology
BLAST of mRNA_L-elsbetiae_contig968.18651.1 vs. uniprot
Match: D8LR18_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR18_ECTSI)

HSP 1 Score: 205 bits (522), Expect = 1.210e-57
Identity = 158/379 (41.69%), Postives = 180/379 (47.49%), Query Frame = 0
Query:   54 GGGREGETT-WACNACTFLNDFDVSRCGMCGTRMSPQQRPPDRTYRDTLIGDDAPAGRSGSRRRRQAGAAGDLEAAAEEARCRLLGEAAASRRRGGSGGRGEGRXXXXXXXGLIDTGGAASXXXXXXXXXXXXXXXXXXXXPGARPGRVLASAIQGXXXXXXXXXXXXGISDETGTRTEPGSDRTVGGGGDGRDDIGAWLRQRRQQRQQSLDFVENPQGRLLLGGGRXXXXXXLDLDLE-ESLMLARRMEALNLPDAAAEMRLEGMRGMVEGPR----GILRRRRRPHLHEQ---EAEEDGATRPASARAIAALPEETLTAGSLSHLKEDGRQCCICLEDFGAGDGVKRLQCLHLYHTVCIQNWLRTSGTCPQCKHRVD 423
            G G  G+TT WAC ACT+LNDF VSRC MCGTRMSPQQRPPD TYRDTLIG                                                     XXXXX  GL+D     S                    PGAR   V++S  QG            G+SDE G                               +  S +FV  P  R+  G          D+  E ESLMLARR+EAL+LP +AA MR EG             GILR+      H+    +A     T PASARAIAALP E LTAG+L+HLK+DGRQCCICLEDF AG+   RL CLHLYHTVCI+NWL+TSGTCPQCK RVD
Sbjct:  106 GEGESGDTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXDQGLLDGRTTISGAAAGSAIGAIGGALLSAVQPGARASGVMSSMFQGALMGGMAGAALGGLSDEPGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVSSFEFVRGPTARVRRGR---------DVVSEMESLMLARRLEALSLPASAAAMRREGGXXXXXXXSSIYAGILRQLAEAQNHDAAGGDAXXXXGTSPASARAIAALPGEALTAGALAHLKDDGRQCCICLEDFEAGEKATRLPCLHLYHTVCIENWLQTSGTCPQCKFRVD 473          
BLAST of mRNA_L-elsbetiae_contig968.18651.1 vs. uniprot
Match: A0A6H5L176_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L176_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 1.030e-41
Identity = 159/375 (42.40%), Postives = 178/375 (47.47%), Query Frame = 0
Query:   54 GGGREGETT--WACNACTFLNDFDVSRCGMCGTRMSPQQRPPDRTYRDTLIGDDAPAGRSGSRRRRQAGAAGDLEAAAEEARCRLLGEAAASRRRGGSGGRGEGRXXXXXXXGLIDTGGAASXXXXXXXXXXXXXXXXXXXXPGARPGRVLASAIQGXXXXXXXXXXXXGISDETGTRTEPGSDRTVGGGGDGRDDIGAWLRQRRQQRQQSLDFVENPQGRLLLGGGRXXXXXXLDLDLEESLMLARRMEALNLPDAAAEMRLEGMRGMVEGPRGILRRRRRPHLHEQEA---EEDGATRPASARAIAALPEETLTAGSLSHLKEDGRQCCICLEDFGAGDGVKRLQCLHLYHTVCIQNWLRTSGTCPQCKHRVD 423
            G G+ GETT  WAC ACT+LNDF VSRC MCGTRMSPQQRPPD TYRDTLIG                                                     XXX    GL+D     S        XXXXXXXXXXX P              XXXXXXXX    G+S+E G   +                   + RQ R+Q   S++FV  P  R+  G               ESLMLAR        DA                  ILRR    H H+             PASARAIAALP ETLTAGSL+HLK+DGRQCCICLE+F AG+   RL CLHLYH+VCI+NWL+TSGTCPQCK RVD
Sbjct:  268 GEGKSGETTTTWACAACTYLNDFGVSRCDMCGTRMSPQQRPPDATYRDTLIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXEDDQGLLDGRSTISGAAAGSAIXXXXXXXXXXXQPXXXXXXXXXXXXXXXXXXXXXXAALGGLSNEPGAGGDSXXXXXXXXXXXXXXXXXXFRRQWRRQ-VSSVEFVRGPTARVRRGRDAVSEV--------ESLMLARL-------DAR-----------------ILRRLAEAHNHDAAGGXXXXXXXASPASARAIAALPGETLTAGSLAHLKDDGRQCCICLEEFEAGERATRLPCLHLYHSVCIENWLQTSGTCPQCKFRVD 606          
BLAST of mRNA_L-elsbetiae_contig968.18651.1 vs. uniprot
Match: A0A0L0FCC5_9EUKA (RING-type domain-containing protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FCC5_9EUKA)

HSP 1 Score: 91.3 bits (225), Expect = 1.280e-18
Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = 0
Query:  355 IAALPEETLTAGSLSHLKEDGRQCCICLEDFGAGDGVKRLQCLHLYHTVCIQNWLRTSGTCPQCKHRVD 423
            I ALP ETL+  +++ L+E  + CCICLEDF AG+ +KRL CLH YH  CI  WL   GTCP CKH ++
Sbjct:   54 IHALPTETLSKAAIAKLEEGSQNCCICLEDFKAGEKMKRLPCLHTYHDHCIDEWLSRRGTCPVCKHALE 122          
BLAST of mRNA_L-elsbetiae_contig968.18651.1 vs. uniprot
Match: A0A835Z4Y2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Y2_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.540e-14
Identity = 38/79 (48.10%), Postives = 48/79 (60.76%), Query Frame = 0
Query:  344 DGATRPASARAIAALPEETLTAGSLSHLKEDGRQCCICLEDFGAGDGVKRLQCLHLYHTVCIQNWLRTSGTCPQCKHRV 422
            +G     S  A+ AL +  L+A  ++ L E  R CCICLE+F AG GVK L+CLH +HT CI   L+    CP CKHRV
Sbjct:   71 EGRRSSVSQAALDALTDRVLSAEEVAKLPESQRSCCICLEEFRAGQGVKWLECLHCFHTTCIDAALQRRDECPICKHRV 149          
BLAST of mRNA_L-elsbetiae_contig968.18651.1 vs. uniprot
Match: A0A7S1MR62_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MR62_ALECA)

HSP 1 Score: 75.5 bits (184), Expect = 1.370e-12
Identity = 39/79 (49.37%), Postives = 47/79 (59.49%), Query Frame = 0
Query:  341 AEEDGATRPASARAIAALPEETLTAGSLSHLKEDGRQCCICLEDFGAGDGVKRLQCLHLYHTVCIQNWLRTSGTCPQCK 419
            AE+  A+ PA A  I ALP   L      ++ E  + C ICLE+FG GD VK L CLHLYH  CI+ WL T  +CP CK
Sbjct:   72 AEQSEASNPAQAADIDALPTRKLAGAD--NVGEQSK-CLICLEEFGEGDDVKTLPCLHLYHQRCIEQWLGTDNSCPVCK 147          
BLAST of mRNA_L-elsbetiae_contig968.18651.1 vs. uniprot
Match: A0A7S3LGX2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGX2_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.460e-12
Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 0
Query:  350 ASARAIAALPEETLTAGSLSHLKEDGRQCCICLEDFGAGDGVKRLQCLHLYHTVCIQNWLRTSGTCPQCKHRVD 423
            A  R I +LP  T+    +  L  D RQC ICLEDF  GD  K + CLH +H  C+  WLRT+G+CP CKHR++
Sbjct:  410 AGERQIRSLPSATIQ--DVDKLPPDSRQCSICLEDFKTGDERKIMPCLHGFHADCVDKWLRTNGSCPICKHRLE 481          
BLAST of mRNA_L-elsbetiae_contig968.18651.1 vs. uniprot
Match: A0A7S1QQM9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QQM9_ALECA)

HSP 1 Score: 72.8 bits (177), Expect = 2.860e-12
Identity = 28/69 (40.58%), Postives = 40/69 (57.97%), Query Frame = 0
Query:  354 AIAALPEETLTAGSLSHLKEDGRQCCICLEDFGAGDGVKRLQCLHLYHTVCIQNWLRTSGTCPQCKHRV 422
            AI ALP      G  S    +G  C IC+EDF  GD ++ L C HL+H+ C+  WL+ +  CP C+H++
Sbjct:   30 AIEALPTRLYEGGDSSKAGGEGTNCQICMEDFEEGDELRTLPCFHLFHSKCVDQWLKVNSICPTCRHKI 98          
BLAST of mRNA_L-elsbetiae_contig968.18651.1 vs. uniprot
Match: UPI00053C58A5 (E3 ubiquitin-protein ligase RING1-like isoform X1 n=4 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C58A5)

HSP 1 Score: 78.6 bits (192), Expect = 2.860e-12
Identity = 35/74 (47.30%), Postives = 44/74 (59.46%), Query Frame = 0
Query:  349 PASARAIAALPEETLTAGSLSHLKEDGRQCCICLEDFGAGDGVKRLQCLHLYHTVCIQNWLRTSGTCPQCKHRV 422
            PA   AI A+P   +T+    HLK+DG QC +CLE+F  G   K L C H+YH  CI  WLR   +CP C+H V
Sbjct:  219 PAPESAIEAIPTVKITS---DHLKKDGSQCSVCLEEFQVGGEAKELPCTHIYHNDCIVPWLRLHNSCPVCRHEV 289          
BLAST of mRNA_L-elsbetiae_contig968.18651.1 vs. uniprot
Match: A0A6G1C942_9ORYZ (RING-type domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1C942_9ORYZ)

HSP 1 Score: 71.2 bits (173), Expect = 9.020e-12
Identity = 32/74 (43.24%), Postives = 49/74 (66.22%), Query Frame = 0
Query:  349 PASARAIAALPEETLTAGSLSHLKEDGRQCCICLEDFGAGDGVKRLQCLHLYHTVCIQNWLRTSGTCPQCKHRV 422
            PA++ AIA L E  L   ++  ++E+  +C +C+EDF AGD ++ + C H +H  CI +WLR SG CP C+HR+
Sbjct:   21 PATSEAIAGLREARLDDEAM--IREE--ECAVCMEDFEAGDKLRAMPCSHCFHERCIFDWLRVSGICPLCRHRL 90          
BLAST of mRNA_L-elsbetiae_contig968.18651.1 vs. uniprot
Match: A0A7S1MQQ6_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MQQ6_ALECA)

HSP 1 Score: 71.2 bits (173), Expect = 4.210e-11
Identity = 37/79 (46.84%), Postives = 44/79 (55.70%), Query Frame = 0
Query:  341 AEEDGATRPASARAIAALPEETLTAGSLSHLKEDGRQCCICLEDFGAGDGVKRLQCLHLYHTVCIQNWLRTSGTCPQCK 419
            AE+  A  PA A  I ALP   L      +L E  + C ICLE+FG GD V  L CLH YH  C++ WL T  +CP CK
Sbjct:   72 AEQSDAGNPAHAADINALPNRKLAGAE--NLGEQSK-CLICLEEFGDGDDVTTLPCLHFYHQRCVEQWLGTDNSCPVCK 147          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig968.18651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR18_ECTSI1.210e-5741.69RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L176_9PHAE1.030e-4142.40RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A0L0FCC5_9EUKA1.280e-1855.07RING-type domain-containing protein (Fragment) n=1... [more]
A0A835Z4Y2_9STRA2.540e-1448.10RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S1MR62_ALECA1.370e-1249.37Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7S3LGX2_9STRA1.460e-1248.65Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1QQM9_ALECA2.860e-1240.58Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
UPI00053C58A52.860e-1247.30E3 ubiquitin-protein ligase RING1-like isoform X1 ... [more]
A0A6G1C942_9ORYZ9.020e-1243.24RING-type domain-containing protein n=1 Tax=Oryza ... [more]
A0A7S1MQQ6_ALECA4.210e-1146.84Hypothetical protein n=1 Tax=Alexandrium catenella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 378..418
e-value: 3.9E-7
score: 39.7
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 377..419
e-value: 5.9E-12
score: 45.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 378..419
score: 11.383
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 335..423
e-value: 5.6E-19
score: 69.6
NoneNo IPR availableGENE3D2.20.28.140coord: 57..102
e-value: 6.8E-7
score: 30.9
NoneNo IPR availablePANTHERPTHR45931FAMILY NOT NAMEDcoord: 2..422
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 371..422
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 63..82
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 57..88
score: 8.592
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 59..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig968contigL-elsbetiae_contig968:6301..7572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig968.18651.1mRNA_L-elsbetiae_contig968.18651.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig968 5731..8568 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig968.18651.1 ID=prot_L-elsbetiae_contig968.18651.1|Name=mRNA_L-elsbetiae_contig968.18651.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=424bp
MQAFEERQQQLGERPFTSSSSSSSSESGHGFAGPNAAAATATAGAGSAAG
ARAGGGREGETTWACNACTFLNDFDVSRCGMCGTRMSPQQRPPDRTYRDT
LIGDDAPAGRSGSRRRRQAGAAGDLEAAAEEARCRLLGEAAASRRRGGSG
GRGEGRSGGQGDGGLIDTGGAASGAAAGSFLGAISAGMLSAIQPGARPGR
VLASAIQGALMGGAAGAALGGISDETGTRTEPGSDRTVGGGGDGRDDIGA
WLRQRRQQRQQSLDFVENPQGRLLLGGGRGGGGGGLDLDLEESLMLARRM
EALNLPDAAAEMRLEGMRGMVEGPRGILRRRRRPHLHEQEAEEDGATRPA
SARAIAALPEETLTAGSLSHLKEDGRQCCICLEDFGAGDGVKRLQCLHLY
HTVCIQNWLRTSGTCPQCKHRVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf