prot_L-elsbetiae_contig967.18645.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig967.18645.1
Unique Nameprot_L-elsbetiae_contig967.18645.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length36
Homology
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BLAST of mRNA_L-elsbetiae_contig967.18645.1 vs. uniprot
Match: A0A6H5K6Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y6_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 6.410e-9
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0 
Query:    7 SSPARLWLRNEVFDGVLPLRATGVPLSPAR 36
            S+  RLWLRNEVFDGVLPLRATGVPLSPAR
Sbjct:    2 STTTRLWLRNEVFDGVLPLRATGVPLSPAR 31
[Close]
BLAST of mRNA_L-elsbetiae_contig967.18645.1 vs. uniprot
Match: D7FP07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP07_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.030e-8
Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0 
Query:    7 SSPARLWLRNEVFDGVLPLRATGVPLSPAR 36
            S+  RLWLRNEVFDGVLPLRATGVPLSPAR
Sbjct:    2 STTTRLWLRNEVFDGVLPLRATGVPLSPAR 31
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig967.18645.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K6Y6_9PHAE6.410e-990.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FP07_ECTSI1.030e-890.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig967contigL-elsbetiae_contig967:27432..27539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig967.18645.1mRNA_L-elsbetiae_contig967.18645.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig967 22906..27539 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig967.18645.1 ID=prot_L-elsbetiae_contig967.18645.1|Name=mRNA_L-elsbetiae_contig967.18645.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=36bp
MSATTSSSPARLWLRNEVFDGVLPLRATGVPLSPAR
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