prot_L-elsbetiae_contig9663.18638.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9663.18638.1
Unique Nameprot_L-elsbetiae_contig9663.18638.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length110
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9663.18638.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 74..87
score: 47.45
coord: 95..108
score: 54.32
NoneNo IPR availablePANTHERPTHR27008:SF130F16P17.10 PROTEINcoord: 39..110
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 24..89
NoneNo IPR availablePANTHERPTHR27008:SF130F16P17.10 PROTEINcoord: 24..89
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 39..110
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 5..109
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 7..110
e-value: 4.7E-24
score: 86.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 49..108
e-value: 1.1E-8
score: 34.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9663contigL-elsbetiae_contig9663:243..1258 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9663.18638.1mRNA_L-elsbetiae_contig9663.18638.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9663 243..1258 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9663.18638.1 ID=prot_L-elsbetiae_contig9663.18638.1|Name=mRNA_L-elsbetiae_contig9663.18638.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=110bp
YEIRSLHSEIQDPLNLHEHTLVLFRVHAALLGFTPVAGPIPPALGGLTTL
QELRLNQTRLNGPIPPQLGGLTALQHLDLKLNRLSGPIPPEFGELTALMT
LDLSGNLLSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt