prot_L-elsbetiae_contig966.18637.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig966.18637.1
Unique Nameprot_L-elsbetiae_contig966.18637.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length182
Homology
BLAST of mRNA_L-elsbetiae_contig966.18637.1 vs. uniprot
Match: D7FQX4_ECTSI (ATP-binding cassette, sub-family D, member 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX4_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 5.350e-30
Identity = 90/195 (46.15%), Postives = 101/195 (51.79%), Query Frame = 0
Query:    5 AAAGDGGREGRNISDEWLLKIERFTVAQPEQTVPLADVYGDSFVSSDDGGSDGLDTEEDEEA----------PATR--------YPHAGGAAAVPASCGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAIVRELSLTVQRGHNLLITGPSGCGKTSLLRSVAGLWEAAAGTVELCPRVEACRREHEARGT 181
            A  G G REG +    WLL++E +TVAQPEQ + L D    S    DD G D   T+  EEA            TR         P  G   A P +                                   GAIVRELSLTV+RGHN+LITGPSGCGKTSLLR++AGLWEAAAGTVELCPRVEAC R HE RGT
Sbjct:  680 ADGGGGEREGDDPG--WLLRVEGYTVAQPEQQLGLGDDC--SSEEDDDSGDDADVTDPREEAVDGDANGSGGDDTRGVGVDRVVSPKDGETLASPGA----GRGGRGSRSNNRRTARGTLAAGAEQHGSRGAGAIVRELSLTVRRGHNVLITGPSGCGKTSLLRTIAGLWEAAAGTVELCPRVEACLRAHEERGT 866          
BLAST of mRNA_L-elsbetiae_contig966.18637.1 vs. uniprot
Match: A0A6H5KC31_9PHAE (ABC transporter domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC31_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 9.610e-30
Identity = 86/192 (44.79%), Postives = 99/192 (51.56%), Query Frame = 0
Query:    6 AAGDGGREGRNISDEWLLKIERFTVAQPEQTVPLADVYGDSFVSSDDGGSDGLDTEEDEEAPATRYPHAGG----------------AAAVPASCGVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAIVRELSLTVQRGHNLLITGPSGCGKTSLLRSVAGLWEAAAGTVELCPRVEACRREHEARGT 181
            AA  GG E      +WLL++E +TVAQPEQ + L D    S    DD G +   T+  EEA       +GG                  A+P  C                                  GAIVRELSLTV+RG N+LITGPSGCGKTSLLR++AGLWEAAAGTVELCPRVEAC R HE RGT
Sbjct:  382 AADGGGGERVGDDPDWLLRVEGYTVAQPEQQLGLGDDC--SSEEDDDSGDEANGTDPREEAVDGDANGSGGDNTRGVGVDRVVSPEDGKALP--CPGEGGGGRGRRSNNPRTACGTLAAGAEQHGSRGAGAIVRELSLTVRRGCNVLITGPSGCGKTSLLRTIAGLWEAAAGTVELCPRVEACLRAHEERGT 569          
BLAST of mRNA_L-elsbetiae_contig966.18637.1 vs. uniprot
Match: K0SL63_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SL63_THAOC)

HSP 1 Score: 61.6 bits (148), Expect = 7.990e-8
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:  121 IVRELSLTVQRGHNLLITGPSGCGKTSLLRSVAGLWEAAAGTVELCPRVE 170
            ++  L LTV+ G NLLI GPSGCGK+SLLR++AGLW A  G +   P  E
Sbjct:  519 LISGLDLTVRHGENLLIAGPSGCGKSSLLRAIAGLWNAGVGNITRVPDSE 568          
BLAST of mRNA_L-elsbetiae_contig966.18637.1 vs. uniprot
Match: A0A6L6Q8M1_9BURK (ATP-binding cassette domain-containing protein n=2 Tax=Massilia ginsengisoli TaxID=1462440 RepID=A0A6L6Q8M1_9BURK)

HSP 1 Score: 61.2 bits (147), Expect = 1.020e-7
Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 0
Query:  121 IVRELSLTVQRGHNLLITGPSGCGKTSLLRSVAGLWEAAAGTVELCPRVEAC 172
            +++ELSL ++ G  LLITG SGCGK+SLLR++AGLW+A +GT+   P +E C
Sbjct:  423 LIKELSLVLKPGDALLITGDSGCGKSSLLRAIAGLWQAGSGTIHH-PPLEEC 473          
BLAST of mRNA_L-elsbetiae_contig966.18637.1 vs. uniprot
Match: A0A139XDK1_9CYAN (ABC transporter n=1 Tax=Scytonema hofmannii PCC 7110 TaxID=128403 RepID=A0A139XDK1_9CYAN)

HSP 1 Score: 60.1 bits (144), Expect = 2.510e-7
Identity = 31/51 (60.78%), Postives = 36/51 (70.59%), Query Frame = 0
Query:  120 AIVRELSLTVQRGHNLLITGPSGCGKTSLLRSVAGLWEAAAGTVELCPRVE 170
            AIV  LSL+VQ G  LLI GPSG GK+SLLR++AGLW A  G +   PR E
Sbjct:  389 AIVENLSLSVQSGEGLLIVGPSGRGKSSLLRAIAGLWNAGTGRLMRPPREE 439          
BLAST of mRNA_L-elsbetiae_contig966.18637.1 vs. uniprot
Match: UPI001685CC5A (ABC transporter ATP-binding protein/permease n=1 Tax=Leptolyngbya sp. FACHB-1624 TaxID=2692802 RepID=UPI001685CC5A)

HSP 1 Score: 59.7 bits (143), Expect = 3.360e-7
Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:  121 IVRELSLTVQRGHNLLITGPSGCGKTSLLRSVAGLWEAAAGTVELCPRVE 170
            +V +LS+T+  G  LL+ GPSGCGK+SLLR++AGLW A  GT+ L P +E
Sbjct:  374 LVADLSVTLSTGEGLLVRGPSGCGKSSLLRAIAGLWNAGTGTI-LRPTLE 422          
BLAST of mRNA_L-elsbetiae_contig966.18637.1 vs. uniprot
Match: A0A3N5IYL2_9CHRO (ABC transporter ATP-binding protein/permease (Fragment) n=1 Tax=Chroococcales cyanobacterium metabat2.561 TaxID=2485785 RepID=A0A3N5IYL2_9CHRO)

HSP 1 Score: 59.3 bits (142), Expect = 4.450e-7
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:  121 IVRELSLTVQRGHNLLITGPSGCGKTSLLRSVAGLWEAAAGTVELCPRVE 170
            IV +LSLTVQ+G  LLI GPSG GK+SLLR++AGLW A  G +   P  E
Sbjct:  387 IVEDLSLTVQKGEGLLIVGPSGRGKSSLLRAIAGLWNAGTGRLVRPPLEE 436          
BLAST of mRNA_L-elsbetiae_contig966.18637.1 vs. uniprot
Match: UPI000402A1D1 (ABC transporter ATP-binding protein/permease n=1 Tax=Pseudoduganella violaceinigra TaxID=246602 RepID=UPI000402A1D1)

HSP 1 Score: 59.3 bits (142), Expect = 4.600e-7
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 0
Query:  121 IVRELSLTVQRGHNLLITGPSGCGKTSLLRSVAGLWEAAAGTVELCP 167
            ++R+L+  V+ G  LLITGPSGCGK+SLLR++AGLW A +G +   P
Sbjct:  395 LIRDLTAVVKPGDALLITGPSGCGKSSLLRAIAGLWNAGSGVIHRPP 441          
BLAST of mRNA_L-elsbetiae_contig966.18637.1 vs. uniprot
Match: A0A844MJK8_9CYAN (ATP-binding cassette domain-containing protein n=1 Tax=Scytonema sp. UIC 10036 TaxID=2304196 RepID=A0A844MJK8_9CYAN)

HSP 1 Score: 59.3 bits (142), Expect = 4.610e-7
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0
Query:  120 AIVRELSLTVQRGHNLLITGPSGCGKTSLLRSVAGLWEAAAGTVELCPRVE 170
            AIV  LSL+V+ G  LLI GPSG GK+SLLR++AGLW+A  G +   PR E
Sbjct:  389 AIVENLSLSVRAGEGLLIVGPSGRGKSSLLRAIAGLWDAGTGRLVRPPRQE 439          
BLAST of mRNA_L-elsbetiae_contig966.18637.1 vs. uniprot
Match: UPI00168325D2 (ATP-binding cassette domain-containing protein n=2 Tax=Nostocales TaxID=1161 RepID=UPI00168325D2)

HSP 1 Score: 59.3 bits (142), Expect = 4.670e-7
Identity = 30/50 (60.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:  121 IVRELSLTVQRGHNLLITGPSGCGKTSLLRSVAGLWEAAAGTVELCPRVE 170
            IV+ LSL V+ G  LLI GPSG GK+SLLR++AGLWEA AG + + P++E
Sbjct:  375 IVKNLSLLVESGQGLLIVGPSGRGKSSLLRAIAGLWEAGAGKI-IRPKLE 423          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig966.18637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQX4_ECTSI5.350e-3046.15ATP-binding cassette, sub-family D, member 4 n=1 T... [more]
A0A6H5KC31_9PHAE9.610e-3044.79ABC transporter domain-containing protein n=1 Tax=... [more]
K0SL63_THAOC7.990e-856.00Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A6L6Q8M1_9BURK1.020e-755.77ATP-binding cassette domain-containing protein n=2... [more]
A0A139XDK1_9CYAN2.510e-760.78ABC transporter n=1 Tax=Scytonema hofmannii PCC 71... [more]
UPI001685CC5A3.360e-756.00ABC transporter ATP-binding protein/permease n=1 T... [more]
A0A3N5IYL2_9CHRO4.450e-760.00ABC transporter ATP-binding protein/permease (Frag... [more]
UPI000402A1D14.600e-755.32ABC transporter ATP-binding protein/permease n=1 T... [more]
A0A844MJK8_9CYAN4.610e-758.82ATP-binding cassette domain-containing protein n=1... [more]
UPI00168325D24.670e-760.00ATP-binding cassette domain-containing protein n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 123..165
e-value: 2.6E-8
score: 34.5
NoneNo IPR availableGENE3D3.40.50.300coord: 103..182
e-value: 5.1E-12
score: 47.8
NoneNo IPR availablePANTHERPTHR11384ATP-BINDING CASSETTE, SUB-FAMILY D MEMBERcoord: 119..167
NoneNo IPR availablePANTHERPTHR11384:SF3ABC TRANSPORTER D FAMILY MEMBER 2, CHLOROPLASTICcoord: 119..167
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 119..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig966contigL-elsbetiae_contig966:20263..20808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig966.18637.1mRNA_L-elsbetiae_contig966.18637.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig966 20263..20809 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig966.18637.1 ID=prot_L-elsbetiae_contig966.18637.1|Name=mRNA_L-elsbetiae_contig966.18637.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=182bp
PAAPAAAGDGGREGRNISDEWLLKIERFTVAQPEQTVPLADVYGDSFVSS
DDGGSDGLDTEEDEEAPATRYPHAGGAAAVPASCGVSSSVGGGYGGGGRY
GGDTSAAAAAAAVAARRGGAIVRELSLTVQRGHNLLITGPSGCGKTSLLR
SVAGLWEAAAGTVELCPRVEACRREHEARGTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase