prot_L-elsbetiae_contig9646.18624.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9646.18624.1
Unique Nameprot_L-elsbetiae_contig9646.18624.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length234
Homology
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BLAST of mRNA_L-elsbetiae_contig9646.18624.1 vs. uniprot
Match: D7G8V8_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V8_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 5.490e-59
Identity = 102/134 (76.12%), Postives = 105/134 (78.36%), Query Frame = 0 
Query:  101 RLFCDLHGNELLYHKPKGEVKGETAGYDATPAGKVDMFKVKLVATTRSSEEGHRDLRMVNQDDQVYLLSFAKEDALTQWMRKLNTAMIIGPGARTSGTREPGAPYLVSKTHRSLTVMWLPPRQPYLNSVHSFQV 234
            RLFCDLHGNELLYHKPKG VKGETAGYDATPAGK+DMFK                         VYLLSF K+DALTQWM+KLNTAMIIGPGARTSGTREP  PYLVSKTHRSLTVMWLPPRQPYLNSVHSFQV
Sbjct:    4 RLFCDLHGNELLYHKPKGTVKGETAGYDATPAGKIDMFK-------------------------VYLLSFVKDDALTQWMKKLNTAMIIGPGARTSGTREPAEPYLVSKTHRSLTVMWLPPRQPYLNSVHSFQV 112
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9646.18624.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8V8_ECTSI5.490e-5976.12Fibronectin type-III domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 83..190
e-value: 0.0071
score: 25.6
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 86..187
e-value: 5.3E-9
score: 36.5
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 82..188
score: 9.329
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 78..189
e-value: 2.8E-11
score: 45.3
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 83..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9646contigL-elsbetiae_contig9646:964..7509 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9646.18624.1mRNA_L-elsbetiae_contig9646.18624.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9646 964..7509 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9646.18624.1 ID=prot_L-elsbetiae_contig9646.18624.1|Name=mRNA_L-elsbetiae_contig9646.18624.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=234bp
QGYPLSLRFRRVPKHLKAHNLEGWSVNALRTVLMEEGAELTGLERHAQLV
AMARRAFWNKPVPLPPAPPHVAPGTAAMINGDTSVCGWLLMRGPHDRELQ
RLFCDLHGNELLYHKPKGEVKGETAGYDATPAGKVDMFKVKLVATTRSSE
EGHRDLRMVNQDDQVYLLSFAKEDALTQWMRKLNTAMIIGPGARTSGTRE
PGAPYLVSKTHRSLTVMWLPPRQPYLNSVHSFQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf