prot_L-elsbetiae_contig9640.18621.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9640.18621.1
Unique Nameprot_L-elsbetiae_contig9640.18621.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length172
Homology
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: D8LQ01_ECTSI (Structural maintenance of chromosomes protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ01_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 3.050e-89
Identity = 155/182 (85.16%), Postives = 159/182 (87.36%), Query Frame = 0
Query:    1 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPKECLQFQQQQQQG-----------QDRGDPKARAATKAPGVLGDATNAMRGAEV 171
            MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPKECLQ QQ                +++G  KAR A KAPGVLGD TNAMRG E+
Sbjct: 1263 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPKECLQQQQXXXXXXXXXXXXXXXXEEKGGAKARTALKAPGVLGDPTNAMRGTEM 1444          
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S0AC05_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AC05_9STRA)

HSP 1 Score: 249 bits (635), Expect = 7.510e-82
Identity = 125/129 (96.90%), Postives = 128/129 (99.22%), Query Frame = 0
Query:    1 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPK 129
            MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH+KPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKT+N TKSVTI+PK
Sbjct:    8 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTNNCTKSVTIDPK 136          
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S0C203_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C203_9STRA)

HSP 1 Score: 250 bits (639), Expect = 1.760e-81
Identity = 125/129 (96.90%), Postives = 128/129 (99.22%), Query Frame = 0
Query:    1 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPK 129
            MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKT+N TKS+TINP+
Sbjct:  107 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTNNCTKSITINPR 235          
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S0PHH8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PHH8_9STRA)

HSP 1 Score: 247 bits (630), Expect = 2.620e-81
Identity = 122/129 (94.57%), Postives = 128/129 (99.22%), Query Frame = 0
Query:    1 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPK 129
            MITLGGDAELELVDSLDPFSEG+VFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH+KPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQF+IISLRNNMFELADRLVGIYKT++ TKSVTINP+
Sbjct:   17 MITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFVIISLRNNMFELADRLVGIYKTNDCTKSVTINPR 145          
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S3GXG2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXG2_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.220e-80
Identity = 121/129 (93.80%), Postives = 128/129 (99.22%), Query Frame = 0
Query:    1 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPK 129
            MITLGGDAELEL+DSLDPFSEGIVFSVRPP+KSWKNI+NLSGGEKTLSSLALVFALHH+KPTPLYVMDEIDAALDFKNVSIVANYIK+RTK+AQFIIISLRNNMFELADRLVGIYKTH+ TKSVTINPK
Sbjct:   22 MITLGGDAELELLDSLDPFSEGIVFSVRPPRKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVANYIKDRTKDAQFIIISLRNNMFELADRLVGIYKTHDATKSVTINPK 150          
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S1ZB93_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZB93_TRICV)

HSP 1 Score: 248 bits (632), Expect = 5.660e-80
Identity = 124/129 (96.12%), Postives = 128/129 (99.22%), Query Frame = 0
Query:    1 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPK 129
            MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH+KPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKT+N TKSVTI+P+
Sbjct:  150 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTNNCTKSVTIDPR 278          
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: UPI00077A7825 (structural maintenance of chromosomes protein 4-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7825)

HSP 1 Score: 243 bits (619), Expect = 7.480e-80
Identity = 120/128 (93.75%), Postives = 125/128 (97.66%), Query Frame = 0
Query:    1 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINP 128
            MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNI+NLSGGEKTLSSLALVFALHH+KPTP YVMDEIDAALDF+NVSIVANYIKERTKNAQF+IISLRNNMFELADRLVGI+KT N TKSVTINP
Sbjct:   26 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNISNLSGGEKTLSSLALVFALHHYKPTPFYVMDEIDAALDFRNVSIVANYIKERTKNAQFVIISLRNNMFELADRLVGIFKTDNCTKSVTINP 153          
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A1Y3N8Z4_PIRSE (SMC_N domain-containing protein n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3N8Z4_PIRSE)

HSP 1 Score: 244 bits (624), Expect = 1.530e-79
Identity = 118/132 (89.39%), Postives = 128/132 (96.97%), Query Frame = 0
Query:    1 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPKECL 132
            MITLGG+AELELVDSLDPFSEGI+FSV PPKKSWKNI+NLSGGEKTLSSLALVFALHH+KPTPLY+MDEIDAALDF+NVSIVANYIK+RTKNAQFIIISLRNNMFELADRL+GIYKTHN TK++TINP E L
Sbjct:    1 MITLGGNAELELVDSLDPFSEGIIFSVMPPKKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYIMDEIDAALDFRNVSIVANYIKDRTKNAQFIIISLRNNMFELADRLIGIYKTHNCTKTITINPTEIL 132          
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: A0A7S0RTU6_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RTU6_9CHLO)

HSP 1 Score: 242 bits (617), Expect = 2.260e-79
Identity = 129/159 (81.13%), Postives = 135/159 (84.91%), Query Frame = 0
Query:    1 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPKECLQFQQQQQQGQDRGD---PKARAATKAP 156
            MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNI NLSGGEKTLSSL+LVFALHH+KPTPLYVMDEIDAALDFKNVSIVA+YIKERTKNAQF+IISLRNNMFELADRLVGIYKT N TKS+ INP          Q G D  +   PKA  A KAP
Sbjct:   11 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNICNLSGGEKTLSSLSLVFALHHYKPTPLYVMDEIDAALDFKNVSIVAHYIKERTKNAQFVIISLRNNMFELADRLVGIYKTDNTTKSIAINPGRF-------QVGADATNTAAPKALPAGKAP 162          
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Match: F0YFH8_AURAN (SMC_N domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFH8_AURAN)

HSP 1 Score: 241 bits (615), Expect = 3.140e-79
Identity = 127/165 (76.97%), Postives = 138/165 (83.64%), Query Frame = 0
Query:    1 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISLRNNMFELADRLVGIYKTHNVTKSVTINPKECLQFQQQQQQGQDRGDPKARAATKAPGVLGDATNA 165
            MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHH+KPTPLYVMDEIDAALD+KNVSI+ANYIK+R ++AQF+IISLRNNMFELADRL G+YKTHNVTK++TI+P        Q           ARA   AP  L DATNA
Sbjct:    4 MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDYKNVSIIANYIKDRCRSAQFVIISLRNNMFELADRLTGVYKTHNVTKTITISPDAFAATLAQ-----------ARAPA-APSPLRDATNA 156          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9640.18621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ01_ECTSI3.050e-8985.16Structural maintenance of chromosomes protein n=2 ... [more]
A0A7S0AC05_9STRA7.510e-8296.90Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S0C203_9STRA1.760e-8196.90Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S0PHH8_9STRA2.620e-8194.57Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S3GXG2_9STRA1.220e-8093.80Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S1ZB93_TRICV5.660e-8096.12Hypothetical protein (Fragment) n=2 Tax=Trieres ch... [more]
UPI00077A78257.480e-8093.75structural maintenance of chromosomes protein 4-li... [more]
A0A1Y3N8Z4_PIRSE1.530e-7989.39SMC_N domain-containing protein n=1 Tax=Piromyces ... [more]
A0A7S0RTU6_9CHLO2.260e-7981.13Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
F0YFH8_AURAN3.140e-7976.97SMC_N domain-containing protein n=1 Tax=Aureococcu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 38..121
e-value: 1.7E-36
score: 125.7
NoneNo IPR availableGENE3D3.40.50.300coord: 1..147
e-value: 5.2E-48
score: 164.8
NoneNo IPR availablePANTHERPTHR43939:SF1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 4coord: 1..134
NoneNo IPR availablePANTHERPTHR43939FAMILY NOT NAMEDcoord: 1..134
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9640contigL-elsbetiae_contig9640:4211..6925 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9640.18621.1mRNA_L-elsbetiae_contig9640.18621.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9640 4211..6928 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9640.18621.1 ID=prot_L-elsbetiae_contig9640.18621.1|Name=mRNA_L-elsbetiae_contig9640.18621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp
MITLGGDAELELVDSLDPFSEGIVFSVRPPKKSWKNIANLSGGEKTLSSL
ALVFALHHFKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNAQFIIISL
RNNMFELADRLVGIYKTHNVTKSVTINPKECLQFQQQQQQGQDRGDPKAR
AATKAPGVLGDATNAMRGAEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003395RecF/RecN/SMC_N
IPR027417P-loop_NTPase