prot_L-elsbetiae_contig964.18620.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig964.18620.1
Unique Nameprot_L-elsbetiae_contig964.18620.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length108
Homology
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BLAST of mRNA_L-elsbetiae_contig964.18620.1 vs. uniprot
Match: A0A6H5L195_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L195_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.870e-32
Identity = 71/103 (68.93%), Postives = 80/103 (77.67%), Query Frame = 0 
Query:    6 SSTARLGGGKAASGKRGDGANKREDQTFAEVVRDSLKRIEARRTNSQKIEEDGGAFPGNPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRQEA 108
            S++AR  GG  A+G        RE+QTFAE  R  L+R E RR   +++EEDGGAF  NPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKR+EA
Sbjct: 1049 SASARRVGGNGAAGS----IKNREEQTFAEAARGILRRAEERRMKVERVEEDGGAFSANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREA 1147
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BLAST of mRNA_L-elsbetiae_contig964.18620.1 vs. uniprot
Match: D8LKT0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT0_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 5.240e-32
Identity = 64/77 (83.12%), Postives = 69/77 (89.61%), Query Frame = 0 
Query:   32 TFAEVVRDSLKRIEARRTNSQKIEEDGGAFPGNPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRQEA 108
            TFAE VRD L+R E RR   +++EEDGGAFP NPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKR+EA
Sbjct:  884 TFAEAVRDILRRAEERRKRVERVEEDGGAFPANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREA 960
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig964.18620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L195_9PHAE3.870e-3268.93Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LKT0_ECTSI5.240e-3283.12Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 86..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig964contigL-elsbetiae_contig964:25884..27281 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig964.18620.1mRNA_L-elsbetiae_contig964.18620.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig964 25883..27281 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig964.18620.1 ID=prot_L-elsbetiae_contig964.18620.1|Name=mRNA_L-elsbetiae_contig964.18620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp
RKQGGSSTARLGGGKAASGKRGDGANKREDQTFAEVVRDSLKRIEARRTN
SQKIEEDGGAFPGNPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRE
RRLKRQEA
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