prot_L-elsbetiae_contig9636.18614.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9636.18614.1
Unique Nameprot_L-elsbetiae_contig9636.18614.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length425
Homology
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BLAST of mRNA_L-elsbetiae_contig9636.18614.1 vs. uniprot
Match: D7G830_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G830_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 8.160e-55
Identity = 133/261 (50.96%), Postives = 154/261 (59.00%), Query Frame = 0 
Query:  166 GAKSAAFAPAPVCSAGDVEPLALAKELGVQSIVDRITRAIIQDGRAAGEAGAXXXXXXXXAIAASPGVTTATNTGVRGDHNGDQYRPQLSPP--PPANQGQQPQRAITDKPWGSGAIGSSPSSRPPGSSSMRMGRPKEDIERLRRVVRDTMSSPQLSPPSSPSLSLYGGIGLAGGEHFGTQPPQWSQKHEACLADMRRRLRETGSPLLGAKDPAVLLGALLRRKGPLIRLLDEAVLSLEDTAEALNGLVSVSTRLMIAGVR 424
            GA +AAF P  VCS   VEPLALAKELGVQ+IV+RIT+ I+ +GR     G          +  S  VT  T   +      ++ R  LS P  P                                  S +  RP ED+ERLRRVVRD MSS Q SP S   LS  GG    G EH GT  PQWSQKHEACL++MRR+LRET SPLL AKDPAVL+ ALLRR+G +IR LD+AVLSLEDTAEALN LVSVS+RL +AGVR
Sbjct:    3 GAPTAAFEPPVVCSVVGVEPLALAKELGVQAIVERITQTIVCNGRVTRPGGDGGGNTGERGLERSLDVTVTTFENLH-----ERRRRPLSCPSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSNKPKRPNEDVERLRRVVRDAMSSTQPSPSSL--LSPNGGFSSEGREHGGTHHPQWSQKHEACLSEMRRKLRETCSPLLRAKDPAVLVAALLRRQGAVIRQLDDAVLSLEDTAEALNALVSVSSRLRMAGVR 256
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9636.18614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G830_ECTSI8.160e-5550.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9636contigL-elsbetiae_contig9636:4830..7609 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9636.18614.1mRNA_L-elsbetiae_contig9636.18614.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9636 4830..7609 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9636.18614.1 ID=prot_L-elsbetiae_contig9636.18614.1|Name=mRNA_L-elsbetiae_contig9636.18614.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=425bp
QQLRHRPVSAPARRRNPLPGSSSSVGATKGKNRRRRQQQQQQQQQQRRRP
ETASGSGGSGEGRGGTGCWGSGRSGGGGRMHGLEQFECLKARLAKTVEGS
SNFVDDVRRLRKAGGLRYCNDGNAGSADAWSGIARRGRGGAASGGQASPL
LRGGGGGSAGAIAEKGAKSAAFAPAPVCSAGDVEPLALAKELGVQSIVDR
ITRAIIQDGRAAGEAGAGGRGHGHGAIAASPGVTTATNTGVRGDHNGDQY
RPQLSPPPPANQGQQPQRAITDKPWGSGAIGSSPSSRPPGSSSMRMGRPK
EDIERLRRVVRDTMSSPQLSPPSSPSLSLYGGIGLAGGEHFGTQPPQWSQ
KHEACLADMRRRLRETGSPLLGAKDPAVLLGALLRRKGPLIRLLDEAVLS
LEDTAEALNGLVSVSTRLMIAGVR*
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