prot_L-elsbetiae_contig9635.18613.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig9635.18613.1
Unique Nameprot_L-elsbetiae_contig9635.18613.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length175
Homology
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BLAST of mRNA_L-elsbetiae_contig9635.18613.1 vs. uniprot
Match: A0A6H5KLX2_9PHAE (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX2_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 8.730e-65
Identity = 115/172 (66.86%), Postives = 135/172 (78.49%), Query Frame = 0 
Query:    3 VYGELQRCLDERVSVEAQAVEAAMLMAKECIEDQSLIEYEWKIQGGSFDVDEGVRLVPIAAANVSNPDATEDIELFSKLQVLNLRHALLSIQFVGAQGFDHAVVMPDDVVDVLLRLSTEEGELPDSWACAPKHELIQVVTSLLGLEGNGQVEVEKVVSGITSKTPSQFLLLA 174
            VYGELQRCLDERVS E QAVEAAM MA+ECI++QS IE+EWKIQG SF VDE  RLVP+   NVS PD +E + +F+KLQ L L+HA+ SIQ VG +G D A+VMP+DVV+VLLRLS EEG LPD WACA K +L+QV T  L  E  GQV+VEKVVS ITSKTP + +LLA
Sbjct: 1350 VYGELQRCLDERVSEEQQAVEAAMTMAEECIDEQSAIEHEWKIQGKSFSVDENFRLVPVPTTNVSRPDVSETLGVFTKLQALRLQHAMASIQHVGTEGLDDAMVMPEDVVEVLLRLS-EEGALPDCWACASKADLVQVATRFLDPEQTGQVQVEKVVSSITSKTPEELILLA 1520
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BLAST of mRNA_L-elsbetiae_contig9635.18613.1 vs. uniprot
Match: D7FRW9_ECTSI (Calponin-homology (CH) domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW9_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 3.020e-64
Identity = 114/172 (66.28%), Postives = 133/172 (77.33%), Query Frame = 0 
Query:    3 VYGELQRCLDERVSVEAQAVEAAMLMAKECIEDQSLIEYEWKIQGGSFDVDEGVRLVPIAAANVSNPDATEDIELFSKLQVLNLRHALLSIQFVGAQGFDHAVVMPDDVVDVLLRLSTEEGELPDSWACAPKHELIQVVTSLLGLEGNGQVEVEKVVSGITSKTPSQFLLLA 174
            VYGELQRCLDERVS E +AVEAAM MA+ECI++QS IE+EWKIQG SF VDE  RLVP+   NVS PD +E + +F+KLQ L L+ AL SIQ VG +G D A+VMP+DVV+VLLRLS EEG LPD WACA K + IQV T  L LE  GQVEVEKVV  ITSKTP + ++LA
Sbjct: 1417 VYGELQRCLDERVSEEQRAVEAAMTMAEECIDEQSAIEHEWKIQGESFSVDESFRLVPVPTPNVSRPDVSETLGVFTKLQALRLQDALASIQHVGTEGLDDAMVMPEDVVEVLLRLSAEEGALPDCWACASKADFIQVATRFLDLEQIGQVEVEKVVLSITSKTPEELIILA 1588
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig9635.18613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLX2_9PHAE8.730e-6566.86Calponin-homology (CH) domain-containing protein n... [more]
D7FRW9_ECTSI3.020e-6466.28Calponin-homology (CH) domain-containing protein n... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig9635contigL-elsbetiae_contig9635:2673..4889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig9635.18613.1mRNA_L-elsbetiae_contig9635.18613.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig9635 2616..5107 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig9635.18613.1 ID=prot_L-elsbetiae_contig9635.18613.1|Name=mRNA_L-elsbetiae_contig9635.18613.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp
MKVYGELQRCLDERVSVEAQAVEAAMLMAKECIEDQSLIEYEWKIQGGSF
DVDEGVRLVPIAAANVSNPDATEDIELFSKLQVLNLRHALLSIQFVGAQG
FDHAVVMPDDVVDVLLRLSTEEGELPDSWACAPKHELIQVVTSLLGLEGN
GQVEVEKVVSGITSKTPSQFLLLA*
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